BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,990,667	C→T	Q58Q (CAG→CAA)	pgsA ←	phosphatidylglycerophosphate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,990,667	0	C	T	100.0%	803.8 / NA	215	Q58Q (CAG→CAA)	pgsA	phosphatidylglycerophosphate synthetase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (125/90); total (125/90)

Only 100 of 221 total aligned reads displayed.

GCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990577‑1990753

    tgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  >  1:3290435/1‑93 (MQ=255)

    tgATAAGGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  <  1:5501964/93‑1 (MQ=255)

     gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 <  2:2511026/93‑1 (MQ=255)

     gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 <  1:3738142/93‑1 (MQ=255)

      aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  2:6029111/93‑1 (MQ=255)

      aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  1:1792557/93‑1 (MQ=255)

      aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  1:3793050/93‑1 (MQ=255)

        aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              <  1:1100935/93‑1 (MQ=255)

        aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              >  2:5925700/1‑93 (MQ=255)

        aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              <  2:3173392/93‑1 (MQ=255)

         aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  1:5427584/1‑93 (MQ=255)

          tGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcgg                                                                            <  2:103414/93‑1 (MQ=255)

          tGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcgg                                                                            >  2:2412052/1‑93 (MQ=255)

           gCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGCAAGCACCAAACCGGGTGCTTTGGTTCCAgcggc                                                                           >  1:1040953/1‑93 (MQ=255)

           gCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCCgcggc                                                                           >  2:2021505/1‑93 (MQ=255)

             tCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGt                                                                         >  2:1362661/1‑93 (MQ=255)

             tCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGt                                                                         >  2:508343/1‑93 (MQ=255)

             tCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGt                                                                         >  1:4270974/1‑93 (MQ=255)

                gTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGcc                                                                      >  1:4706496/1‑93 (MQ=255)

                   aCCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGa                                                                   <  1:5965380/93‑1 (MQ=255)

                    ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  >  2:649308/1‑93 (MQ=255)

                    ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  <  1:3859146/93‑1 (MQ=255)

                      aGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaaaa                                                                >  2:4282025/1‑93 (MQ=255)

                       gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  2:5519707/1‑93 (MQ=255)

                       gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAACACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  1:1403799/1‑93 (MQ=255)

                        cACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAcc                                                              >  2:5411103/1‑93 (MQ=255)

                         aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             >  2:786209/1‑93 (MQ=255)

                          ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            <  2:3887153/93‑1 (MQ=255)

                            aTGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCg                                                          >  2:5818542/1‑93 (MQ=255)

                             tGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGa                                                         >  1:528535/1‑93 (MQ=255)

                             tGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGa                                                         >  2:2810490/1‑93 (MQ=255)

                             tGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGa                                                         >  1:3498682/1‑93 (MQ=255)

                             tGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGa                                                         >  2:1593353/1‑93 (MQ=255)

                                cGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAAcc                                                      <  2:4260355/93‑1 (MQ=255)

                                  aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    >  2:4799171/1‑93 (MQ=255)

                                   tAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   >  1:3255296/1‑93 (MQ=255)

                                    aGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtc                                                  <  1:5816177/93‑1 (MQ=255)

                                    aGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGCGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGCACcagtc                                                  >  1:1798291/1‑93 (MQ=255)

                                     gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 <  1:372171/93‑1 (MQ=255)

                                     gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 <  1:2086382/93‑1 (MQ=255)

                                       cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  2:1143234/1‑93 (MQ=255)

                                       cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               <  2:5367733/93‑1 (MQ=255)

                                       cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  2:5603065/1‑93 (MQ=255)

                                        aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              <  1:1368280/93‑1 (MQ=255)

                                        aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              <  1:4346994/93‑1 (MQ=255)

                                        aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  1:6119164/1‑93 (MQ=255)

                                         cGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAgtcagtca                                             >  1:5340181/1‑93 (MQ=255)

                                         cGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAgtcagtca                                             >  2:5714919/1‑93 (MQ=255)

                                          gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  1:5543307/1‑93 (MQ=255)

                                          gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            <  1:2018569/93‑1 (MQ=255)

                                          gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  2:4950712/1‑93 (MQ=255)

                                          cagaACTTTACCTGCGACAGGGTCAAGGAAAGCACCAATCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            <  2:4837425/92‑1 (MQ=255)

                                             aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  1:2569369/1‑93 (MQ=255)

                                             aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  1:3983763/1‑93 (MQ=255)

                                              aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:6097163/1‑93 (MQ=255)

                                              aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:442802/1‑93 (MQ=255)

                                                tttATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACcgccgc                                      <  2:329321/93‑1 (MQ=255)

                                                   aTCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGAc                                   >  2:3418722/1‑93 (MQ=255)

                                                    tCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACg                                  >  2:2151152/1‑93 (MQ=255)

                                                      tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                >  1:2555544/1‑93 (MQ=255)

                                                      tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                >  1:517769/1‑93 (MQ=255)

                                                      tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTCCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                <  1:2862798/93‑1 (MQ=255)

                                                       gCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAg                               >  2:4686380/1‑93 (MQ=255)

                                                       gCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAg                               >  1:1678178/1‑93 (MQ=255)

                                                         cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  2:4563813/1‑93 (MQ=255)

                                                         cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  1:2336058/1‑93 (MQ=255)

                                                         cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             <  1:1965564/93‑1 (MQ=255)

                                                          acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  1:4966187/1‑93 (MQ=255)

                                                          acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  2:5841148/1‑93 (MQ=255)

                                                          acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            <  2:3679409/93‑1 (MQ=255)

                                                           caGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaaa                           <  2:1551127/93‑1 (MQ=255)

                                                           caGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaaa                           >  2:2732839/1‑93 (MQ=255)

                                                             gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         <  1:4133674/93‑1 (MQ=255)

                                                              ggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGa                        <  1:1268832/93‑1 (MQ=255)

                                                                tCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgc                      <  1:206483/93‑1 (MQ=255)

                                                                 cAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcg                     >  2:5172429/1‑93 (MQ=255)

                                                                 cAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcg                     >  2:1966887/1‑93 (MQ=255)

                                                                   aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   >  2:3495255/1‑93 (MQ=255)

                                                                   aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   <  1:5948762/93‑1 (MQ=255)

                                                                    ggAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcgg                  <  2:180077/93‑1 (MQ=255)

                                                                      aaaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggcg                <  1:5633300/93‑1 (MQ=255)

                                                                      aaaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggcg                <  1:707158/93‑1 (MQ=255)

                                                                      aaaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggcg                >  2:3717181/1‑93 (MQ=255)

                                                                       aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               >  2:3827217/1‑93 (MQ=255)

                                                                       aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               >  1:4941936/1‑93 (MQ=255)

                                                                          cACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaa            >  1:4222/1‑93 (MQ=255)

                                                                           aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           <  1:3030002/93‑1 (MQ=255)

                                                                            ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  1:4634547/93‑1 (MQ=255)

                                                                            ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:2261288/93‑1 (MQ=255)

                                                                             cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         >  2:3016918/1‑93 (MQ=255)

                                                                               aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  2:5875833/93‑1 (MQ=255)

                                                                                aCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCg      <  1:4596482/93‑1 (MQ=255)

                                                                                aCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCg      <  2:1703743/93‑1 (MQ=255)

                                                                                 ccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa     <  1:5376764/93‑1 (MQ=255)

                                                                                 ccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa     <  1:930665/93‑1 (MQ=255)

                                                                                 ccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCCACGCAGAAAATGAGCGCGGCGGCAAACGGCGa     <  2:2888409/93‑1 (MQ=255)

                                                                                  cGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAc    <  2:3944138/93‑1 (MQ=255)

                                                                                  cGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAc    <  2:1494273/93‑1 (MQ=255)

                                                                                   gggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAcc   >  1:507480/1‑93 (MQ=255)

                                                                                    ggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCa  >  1:6206097/1‑93 (MQ=255)

GCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990577‑1990753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`