BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,998,039	A→G	Y124H (TAC→CAC)	fliY ←	putative periplasmic binding transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,998,039	0	A	G	100.0%	642.9 / NA	200	Y124H (TAC→CAC)	fliY	putative periplasmic binding transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/104); total (96/104)

Only 100 of 210 total aligned reads displayed.

CCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG  >  NC_000913/1997949‑1998128

 ccccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgg                                                                                        >  1:785333/1‑93 (MQ=255)

 ccccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCCTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgg                                                                                        >  1:2843591/1‑93 (MQ=255)

  cccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCggg                                                                                       >  1:1492997/1‑93 (MQ=255)

   ccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgggg                                                                                      >  1:4274953/1‑93 (MQ=255)

   ccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgggg                                                                                      >  1:539344/1‑93 (MQ=255)

   ccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgggg                                                                                      <  1:6021449/93‑1 (MQ=255)

     aCTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAAAGGGGGGCgggggg                                                                                    >  2:4026229/1‑91 (MQ=255)

      cTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTg                                                                                   >  2:2364738/1‑93 (MQ=255)

      cTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTg                                                                                   >  2:5356627/1‑93 (MQ=255)

       ttttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgc                                                                                  >  2:1675998/1‑92 (MQ=255)

       ttttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTga                                                                                  >  2:207878/1‑93 (MQ=255)

        tttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgag                                                                                 <  2:5744662/93‑1 (MQ=255)

        tttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgag                                                                                 <  1:3713010/93‑1 (MQ=255)

         ttttGCCTTTCAGATCATCGGCTGTTTTAATGGTTCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgaga                                                                                <  2:3823448/93‑1 (MQ=255)

            tGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAAt                                                                             <  2:3492559/93‑1 (MQ=255)

             gCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATc                                                                            >  2:4298551/1‑93 (MQ=255)

              ccTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCg                                                                           <  2:2899878/93‑1 (MQ=255)

                 ttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAt                                                                        >  2:5423107/1‑93 (MQ=255)

                   cAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCTGGGGTGAGAAATCGTAttt                                                                      >  1:5388558/1‑93 (MQ=255)

                   cAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAttt                                                                      >  1:2435960/1‑93 (MQ=255)

                   cAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAttt                                                                      <  2:4680392/93‑1 (MQ=255)

                    aGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt                                                                     <  1:2218742/93‑1 (MQ=255)

                    aGATCATCGGCTGTTTTAATGGTACCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt                                                                     <  2:5884701/93‑1 (MQ=255)

                      atcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttttt                                                                   <  1:487594/93‑1 (MQ=255)

                       tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc                                                                  <  2:1936277/93‑1 (MQ=255)

                       tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc                                                                  >  1:1578410/1‑93 (MQ=255)

                        catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCt                                                                 <  2:6237023/93‑1 (MQ=255)

                        catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCt                                                                 <  2:1556637/93‑1 (MQ=255)

                        catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCt                                                                 <  1:2583336/93‑1 (MQ=255)

                         atcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCtt                                                                <  2:4131450/93‑1 (MQ=255)

                          tcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTg                                                               >  1:3380162/1‑93 (MQ=255)

                           cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc                                                              <  1:4912588/93‑1 (MQ=255)

                             gCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgcgc                                                            >  1:2940574/1‑93 (MQ=255)

                             gCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgcgc                                                            <  1:4580674/93‑1 (MQ=255)

                              cTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCt                                                           <  2:1012576/93‑1 (MQ=255)

                              cTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCt                                                           >  2:4277412/1‑93 (MQ=255)

                               tGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtc                                                          >  1:3978786/1‑93 (MQ=255)

                               tGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtc                                                          <  2:1039120/93‑1 (MQ=255)

                               tGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtc                                                          >  1:4300231/1‑93 (MQ=255)

                                gTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtca                                                         >  1:739355/1‑93 (MQ=255)

                                 ttttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcat                                                        <  2:6169687/93‑1 (MQ=255)

                                  tttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcatc                                                       >  2:1709531/1‑93 (MQ=255)

                                    tAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGTGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAg                                                     <  1:5505711/93‑1 (MQ=255)

                                     aaTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGa                                                    >  1:1298529/1‑93 (MQ=255)

                                     aaTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGa                                                    <  2:3533889/93‑1 (MQ=255)

                                     aaTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGa                                                    <  2:4586194/93‑1 (MQ=255)

                                       tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa                                                  <  1:4604027/93‑1 (MQ=255)

                                       tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa                                                  <  2:2760256/93‑1 (MQ=255)

                                        ggTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAt                                                 <  1:4531490/93‑1 (MQ=255)

                                        ggTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAt                                                 <  2:2121060/93‑1 (MQ=255)

                                          tGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATgg                                               >  1:3952369/1‑93 (MQ=255)

                                           tccTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGt                                              <  1:915271/92‑1 (MQ=255)

                                           gCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGt                                              >  1:1779271/1‑93 (MQ=255)

                                           gCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGt                                              <  2:46749/93‑1 (MQ=255)

                                            ccTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGGAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTg                                             >  1:216843/1‑93 (MQ=255)

                                              ttCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAc                                           <  2:5103628/93‑1 (MQ=255)

                                              ttCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAc                                           >  2:1210535/1‑93 (MQ=255)

                                               tCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAcc                                          <  2:356145/93‑1 (MQ=255)

                                                 gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg                                        >  1:4194401/1‑93 (MQ=255)

                                                 gTTACCTCTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg                                        >  1:1537317/1‑93 (MQ=255)

                                                  ttACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGa                                       >  2:6036448/1‑93 (MQ=255)

                                                   tACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAt                                      >  1:5775010/1‑93 (MQ=255)

                                                     ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa                                    >  1:1972085/1‑93 (MQ=255)

                                                     ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa                                    >  1:4118548/1‑93 (MQ=255)

                                                     ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa                                    >  1:109763/1‑93 (MQ=255)

                                                      cTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTaa                                   >  2:3794189/1‑93 (MQ=255)

                                                      cTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTaa                                   >  1:3188810/1‑93 (MQ=255)

                                                        tttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATc                                 <  2:2011350/93‑1 (MQ=255)

                                                           ttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcacc                              <  2:131668/93‑1 (MQ=255)

                                                                cAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATc                         >  1:5837577/1‑93 (MQ=255)

                                                                cAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATc                         >  2:3671037/1‑93 (MQ=255)

                                                                    gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa                     <  1:2303609/93‑1 (MQ=255)

                                                                    gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa                     <  2:6089070/93‑1 (MQ=255)

                                                                       tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt                  >  1:4782475/1‑93 (MQ=255)

                                                                         aaTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGttt                >  1:2100615/1‑93 (MQ=255)

                                                                          aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa               <  1:3801902/93‑1 (MQ=255)

                                                                           tACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTag              >  1:5626379/1‑93 (MQ=255)

                                                                            aCCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTaga             <  1:5477906/93‑1 (MQ=255)

                                                                             ccAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTagag            >  1:5703661/1‑93 (MQ=255)

                                                                              cAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGt           <  1:1752277/93‑1 (MQ=255)

                                                                              cAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGt           <  1:2344401/93‑1 (MQ=255)

                                                                               aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCGATACGTTTAGAGTc          >  2:137216/1‑93 (MQ=255)

                                                                                gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc         >  2:2059187/1‑93 (MQ=255)

                                                                                gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc         <  2:415636/93‑1 (MQ=255)

                                                                                gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc         <  2:5534454/93‑1 (MQ=255)

                                                                                gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc         >  1:52299/1‑93 (MQ=255)

                                                                                gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc         >  1:4855266/1‑93 (MQ=255)

                                                                                 aaaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCa        >  1:3301905/1‑93 (MQ=255)

                                                                                 aaaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCa        <  1:360770/93‑1 (MQ=255)

                                                                                 aaaTGGTGTGCGGGGTTGAGAAATCGTATGTTTTCTTGCGCTCATCAGAAGTGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCa        <  2:3348594/93‑1 (MQ=255)

                                                                                  aaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAg       <  1:1348298/93‑1 (MQ=255)

                                                                                  aaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAg       <  2:5495457/93‑1 (MQ=255)

                                                                                  aaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAg       <  1:2752010/93‑1 (MQ=255)

                                                                                   aTGGTGTGCGGTGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGc      <  2:4459261/93‑1 (MQ=255)

                                                                                   aTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGc      <  1:687131/93‑1 (MQ=255)

                                                                                     ggTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAAAACGTTTAGAGTCCAGCGa    <  2:242246/93‑1 (MQ=255)

                                                                                      gtgtGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc   >  2:2244502/1‑93 (MQ=255)

                                                                                      gtgtGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc   <  1:2580928/93‑1 (MQ=255)

                                                                                      gtgtGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc   <  1:1257036/93‑1 (MQ=255)

                                                                                       tgtgCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACg  <  2:4320654/93‑1 (MQ=255)

CCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG  >  NC_000913/1997949‑1998128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`