BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,012,629	T→C	V460A (GTA→GCA)	fliF →	FliF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,012,629	0	T	C	100.0%	679.6 / NA	208	V460A (GTA→GCA)	fliF	FliF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/83); total (125/83)

Only 100 of 210 total aligned reads displayed.

ATAGCAGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGTACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAGG  >  NC_000913/2012539‑2012718

aTAGCAGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCAc                                                                                         >  2:2354069/1‑93 (MQ=255)

     aGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGATGGCActgctg                                                                                    >  1:4646752/1‑93 (MQ=255)

      gTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCtgg                                                                                   >  1:2827130/1‑93 (MQ=255)

      gTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCtgg                                                                                   <  2:3410818/93‑1 (MQ=255)

        gACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCtggtg                                                                                 <  2:1428363/93‑1 (MQ=255)

         aCGAAAGAGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCtggtgg                                                                                >  2:3523041/1‑93 (MQ=255)

            aaaGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgt                                                                             <  1:561937/93‑1 (MQ=255)

             aaGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgtg                                                                            >  1:3449022/1‑93 (MQ=255)

               gcggcgGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgtggc                                                                          >  2:6094914/1‑93 (MQ=255)

               gcggcgGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgtggc                                                                          >  2:4928360/1‑93 (MQ=255)

               gcggcgGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgtggc                                                                          <  1:5790257/93‑1 (MQ=255)

               gcggcgGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGgtggcgcggc                                                                          >  2:850450/1‑93 (MQ=255)

                cggcggAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGgct                                                                         >  1:3425818/1‑93 (MQ=255)

                 ggcggAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGgctg                                                                        >  1:1720042/1‑93 (MQ=255)

                  gcggAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGgctgc                                                                       >  2:3255793/1‑93 (MQ=255)

                    ggAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGctgctg                                                                     >  2:5056459/1‑93 (MQ=255)

                     gagaACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCtgt                                                                    >  2:1216276/1‑93 (MQ=255)

                     gagaACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCtgt                                                                    <  2:1093863/93‑1 (MQ=255)

                     gagaACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCtgt                                                                    >  1:5764376/1‑93 (MQ=255)

                      agaACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCtgtg                                                                   <  2:2523863/93‑1 (MQ=255)

                       gaACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTgg                                                                  <  2:2086508/93‑1 (MQ=255)

                           tGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGa                                                              <  1:4317591/93‑1 (MQ=255)

                              cATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAg                                                           >  2:4756782/1‑93 (MQ=255)

                              cATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAg                                                           >  1:3784284/1‑93 (MQ=255)

                              cATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAg                                                           <  1:6096544/93‑1 (MQ=255)

                              cATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAg                                                           >  1:1132536/1‑93 (MQ=255)

                               aTTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGc                                                          >  2:1966766/1‑93 (MQ=255)

                                ttCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCg                                                         >  1:5959956/1‑93 (MQ=255)

                                ttCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCg                                                         <  1:165485/93‑1 (MQ=255)

                                 tCTGTCACCAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGTCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCgg                                                        <  1:5568106/93‑1 (MQ=255)

                                   tGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGGAAGTGGTa                                                      >  1:2794150/1‑93 (MQ=255)

                                   tGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTa                                                      >  2:3594404/1‑93 (MQ=255)

                                    ggCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTAc                                                     <  2:2778914/93‑1 (MQ=255)

                                    ggCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTAc                                                     <  1:2179047/93‑1 (MQ=255)

                                     gCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACg                                                    >  1:2021277/1‑93 (MQ=255)

                                       aaCAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTc                                                  <  1:3111881/93‑1 (MQ=255)

                                       aaCAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTc                                                  >  1:1877419/1‑93 (MQ=255)

                                       aaCAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTc                                                  <  2:5304567/93‑1 (MQ=255)

                                         cAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCg                                                >  1:4738007/1‑93 (MQ=255)

                                          aGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGc                                               >  2:180582/1‑93 (MQ=255)

                                            cAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGGAAGCGGTACGTCCGCAg                                             >  2:1510104/1‑93 (MQ=255)

                                             aaGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGc                                            >  2:4347316/1‑93 (MQ=255)

                                             aaGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGc                                            <  2:3290947/93‑1 (MQ=255)

                                               gCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTa                                          >  1:4244547/1‑93 (MQ=255)

                                               gCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTa                                          >  2:5943452/1‑93 (MQ=255)

                                                cGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTaa                                         <  2:1542682/93‑1 (MQ=255)

                                                 gTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAac                                        <  2:3985836/93‑1 (MQ=255)

                                                  tttATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCCGTACGTCCGCAGCTAaca                                       >  1:3959883/1‑93 (MQ=255)

                                                   ttATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAacac                                      <  1:127543/93‑1 (MQ=255)

                                                    tATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACg                                     >  2:3857041/1‑93 (MQ=255)

                                                     aTCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGt                                    <  1:5478123/93‑1 (MQ=255)

                                                      tCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTc                                   <  1:2347227/93‑1 (MQ=255)

                                                      tCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTc                                   <  2:3699361/93‑1 (MQ=255)

                                                      tCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTc                                   <  1:3237084/93‑1 (MQ=255)

                                                        gATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTcgc                                 >  1:1603423/1‑93 (MQ=255)

                                                        gATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTcgc                                 <  2:1899227/93‑1 (MQ=255)

                                                          tCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCgcgc                               >  2:5624455/1‑93 (MQ=255)

                                                          tCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCgcgc                               >  1:2625519/1‑93 (MQ=255)

                                                           cAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCt                              >  1:1068741/1‑93 (MQ=255)

                                                           cAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCt                              >  1:1228291/1‑93 (MQ=255)

                                                           cAGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCt                              >  1:1218148/1‑93 (MQ=255)

                                                            aGTTACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTg                             >  2:4054300/1‑93 (MQ=255)

                                                              ttACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAg                           <  1:6036395/93‑1 (MQ=255)

                                                              ttACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAg                           >  1:5041241/1‑93 (MQ=255)

                                                              ttACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAg                           <  2:6114219/93‑1 (MQ=255)

                                                              ttACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAg                           >  1:783337/1‑93 (MQ=255)

                                                               tACTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAgg                          <  2:2736311/93‑1 (MQ=255)

                                                                aCTTGCTGCCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGc                         >  1:4631626/1‑93 (MQ=255)

                                                                     ctgcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGa                    <  2:4889963/93‑1 (MQ=255)

                                                                      tgcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGaa                   >  2:5501894/1‑93 (MQ=255)

                                                                      tgcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGaa                   <  1:67100/93‑1 (MQ=255)

                                                                      tgcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGaa                   >  2:5701308/1‑93 (MQ=255)

                                                                      tgcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGaa                   >  1:3353250/1‑93 (MQ=255)

                                                                       gcCGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGaaa                  >  1:445926/1‑93 (MQ=255)

                                                                       gcCGGTCGCTGGATGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTTCGTCCGCAGCTAACACGTCGCGCTGAGGCGATGcaa                  >  1:3661979/1‑93 (MQ=255)

                                                                        ccGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAg                 >  1:5724313/1‑93 (MQ=255)

                                                                         cGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGc                >  1:3590876/1‑93 (MQ=255)

                                                                         cGGTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGc                >  2:2138310/1‑93 (MQ=255)

                                                                          ggTCGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCt               >  1:1989862/1‑93 (MQ=255)

                                                                             cGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTa            <  2:3754865/93‑1 (MQ=255)

                                                                             cGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTa            <  1:1470773/93‑1 (MQ=255)

                                                                             cGCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTa            >  2:4153421/1‑93 (MQ=255)

                                                                              gCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTAc           >  1:1815363/1‑93 (MQ=255)

                                                                              gCTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTAc           >  1:1779031/1‑93 (MQ=255)

                                                                               cTGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACa          <  2:4279339/93‑1 (MQ=255)

                                                                                tGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAg         >  2:2570917/1‑93 (MQ=255)

                                                                                tGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAg         >  2:4837093/1‑93 (MQ=255)

                                                                                tGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAg         >  2:1330745/1‑93 (MQ=255)

                                                                                tGGTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAg         >  1:5375147/1‑93 (MQ=255)

                                                                                  gTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCa       >  1:616587/1‑93 (MQ=255)

                                                                                  gTTGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCa       <  1:5946813/93‑1 (MQ=255)

                                                                                   ttGCTGGCACTGCTGGTGGCGTGGCTTCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCaa      >  2:746006/1‑93 (MQ=255)

                                                                                   ttGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCaa      >  1:1953324/1‑93 (MQ=255)

                                                                                    tGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAAc     <  2:1955957/93‑1 (MQ=255)

                                                                                    tGCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAAc     <  2:543144/93‑1 (MQ=255)

                                                                                     gCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACa    <  2:2407524/93‑1 (MQ=255)

                                                                                     gCTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACa    <  1:4215635/93‑1 (MQ=255)

                                                                                      cTGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGCGGCGATGAGAGCTGCACAGCAACAg   >  1:5271640/1‑93 (MQ=255)

                                                                                       tGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAgg  >  1:2555742/1‑93 (MQ=255)

                                                                                       tGGCACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAgg  >  1:5056082/1‑93 (MQ=255)

ATAGCAGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGTACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAGG  >  NC_000913/2012539‑2012718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`