Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,143,530 T→C L748P (CTG→CCG)  yegE → putative sensor‑type protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,143,5300TC99.5% 630.1 / NA 195L748P (CTG→CCG) yegEputative sensor‑type protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (97/97);  minor base A (1/0);  total (98/97)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 207 total aligned reads displayed.

TTATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCTGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAGCGCGC  >  NC_000913/2143440‑2143619
                                                                                          |                                                                                         
ttATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGa                                                                                         <  2:3700248/93‑1 (MQ=255)
ttATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGa                                                                                         <  2:3064214/93‑1 (MQ=255)
 tATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAg                                                                                        <  2:1780521/93‑1 (MQ=255)
 tATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAg                                                                                        >  1:2516141/1‑93 (MQ=255)
  aTCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGt                                                                                       >  2:746391/1‑93 (MQ=255)
  aTCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGt                                                                                       >  1:167355/1‑93 (MQ=255)
      aTCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgc                                                                                   >  1:5206630/1‑93 (MQ=255)
      aTCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgc                                                                                   <  1:6176285/93‑1 (MQ=255)
      aTCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgc                                                                                   >  1:1001517/1‑93 (MQ=255)
        cTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgctg                                                                                 >  1:2745159/1‑93 (MQ=255)
        cTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGAGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgctg                                                                                 >  1:4087974/1‑93 (MQ=255)
         ttGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTAtgctgc                                                                                <  1:3828905/93‑1 (MQ=255)
         ttGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGGGACGCTTTGCTGCGCGAACTGGCGTCGTTAATTGCGAGTAtgctgg                                                                                >  2:932414/1‑92 (MQ=255)
           gATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGCGACGCTTTGCTGCGCGAACTGGCGTCGCTAATGTCGAGTATGCCGCGt                                                                              >  2:1825363/1‑93 (MQ=255)
            aTCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGtt                                                                             >  2:2859772/1‑93 (MQ=255)
            aTCGCTTTAAAGCGGTGAATGACAGCGCCGCGCATGCGGCGGGCGACGGTTTGCTGCGCGAACTGTAGTCGTTAATGCCGCGGATGCTGTGtt                                                                             >  2:1344050/1‑93 (MQ=255)
              cGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGGGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGCATGCTGCGTTcc                                                                           >  2:4049351/1‑93 (MQ=255)
               gCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTccc                                                                          >  1:3692908/1‑92 (MQ=255)
               gCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCa                                                                          >  2:602245/1‑93 (MQ=255)
               gCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCa                                                                          <  2:1001191/93‑1 (MQ=255)
                cTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAg                                                                         >  2:3136806/1‑93 (MQ=255)
                cTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAg                                                                         >  2:910148/1‑93 (MQ=255)
                cTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAg                                                                         >  2:3253127/1‑93 (MQ=255)
                 tttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGc                                                                        >  1:1260118/1‑93 (MQ=255)
                 tttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGc                                                                        >  2:3968095/1‑93 (MQ=255)
                 tttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGc                                                                        >  2:4332812/1‑93 (MQ=255)
                 tttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGc                                                                        <  1:4902256/93‑1 (MQ=255)
                  ttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTGCAGCg                                                                       >  1:3166182/1‑93 (MQ=255)
                  ttAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCg                                                                       >  1:5551454/1‑93 (MQ=255)
                    aaaGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGAc                                                                     <  2:3921924/93‑1 (MQ=255)
                     aaGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACg                                                                    <  1:2857063/93‑1 (MQ=255)
                     aaGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACg                                                                    >  1:6193617/1‑93 (MQ=255)
                       gCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTg                                                                  <  2:2696400/93‑1 (MQ=255)
                       gCGGTGAATGACAGCGCCGGGCATGCGGAGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGACGAGTATGCTGCGTTCCACCAACGTg                                                                  >  2:6228303/1‑93 (MQ=255)
                        cGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGc                                                                 >  1:2065462/1‑93 (MQ=255)
                         ggTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCt                                                                <  2:4889041/93‑1 (MQ=255)
                            gAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGgc                                                             >  1:4952544/1‑93 (MQ=255)
                            gAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGgc                                                             >  2:228076/1‑93 (MQ=255)
                            gAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGgc                                                             >  2:5310066/1‑93 (MQ=255)
                              aTGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGgcgc                                                           <  2:2387599/93‑1 (MQ=255)
                               tGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGTCGAGTATGCTGCGTTCCAGCGACGTGCTGgcgtg                                                          >  2:3692943/1‑91 (MQ=255)
                               tGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGcgcg                                                          >  1:5128511/1‑93 (MQ=255)
                                 aCAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGAc                                                        <  1:4599223/93‑1 (MQ=255)
                                 aCAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGAc                                                        >  1:4415963/1‑93 (MQ=255)
                                   aGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTc                                                      >  1:434096/1‑93 (MQ=255)
                                   aGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCACCGACGTGCTGGCGCGACTc                                                      <  2:1217514/93‑1 (MQ=255)
                                    gcgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCg                                                     >  2:5296041/1‑93 (MQ=255)
                                    gcgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCg                                                     >  1:4476445/1‑93 (MQ=255)
                                    gcgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCg                                                     <  1:3605883/93‑1 (MQ=255)
                                    gcgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCAGAGTATGCTGCGTTACAGCGACGTGCTGGCGCGACTCg                                                     >  1:1051740/1‑93 (MQ=255)
                                     cgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCgg                                                    <  1:4282900/93‑1 (MQ=255)
                                     cgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCgg                                                    <  1:2266829/93‑1 (MQ=255)
                                     cgcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCgg                                                    <  2:638606/93‑1 (MQ=255)
                                      gcCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGt                                                   <  1:2986387/93‑1 (MQ=255)
                                       ccGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTg                                                  >  2:3783200/1‑93 (MQ=255)
                                       ccGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTg                                                  <  1:5804131/93‑1 (MQ=255)
                                       ccGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTg                                                  <  2:2920246/93‑1 (MQ=255)
                                       ccGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTg                                                  <  2:5606639/93‑1 (MQ=255)
                                       ccGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTg                                                  <  1:4748643/93‑1 (MQ=255)
                                          ggCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGgggggg                                               >  2:4564009/1‑93 (MQ=255)
                                             aTGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGGTg                                            >  2:2242009/1‑93 (MQ=255)
                                             aTGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATg                                            >  1:646598/1‑93 (MQ=255)
                                              tGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGa                                           >  1:1377198/1‑93 (MQ=255)
                                              tGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGa                                           <  1:1118164/93‑1 (MQ=255)
                                               gcggcgGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGGGGGGATGaa                                          >  2:3014920/1‑93 (MQ=255)
                                                    gggTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTgg                                     >  2:2080114/1‑93 (MQ=255)
                                                     ggTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGt                                    >  1:5291641/1‑93 (MQ=255)
                                                      gTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGtt                                   >  2:2577657/1‑92 (MQ=255)
                                                      gTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTc                                   <  2:4179857/93‑1 (MQ=255)
                                                      gTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTc                                   <  2:1381547/93‑1 (MQ=255)
                                                       tGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTct                                  >  1:932175/1‑93 (MQ=255)
                                                        gACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTctg                                 <  2:3217970/93‑1 (MQ=255)
                                                         aCGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTctgc                                <  1:3954154/93‑1 (MQ=255)
                                                          cGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTctgct                               >  1:469009/1‑93 (MQ=255)
                                                          cGCTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTctgct                               >  1:1560740/1‑93 (MQ=255)
                                                            cTTTGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCtgctgc                             >  2:3964387/1‑93 (MQ=255)
                                                             tttGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTgctgct                            >  1:1810398/1‑93 (MQ=255)
                                                              ttGCTGCGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTa                           <  1:5068983/93‑1 (MQ=255)
                                                               tgctgcGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTAc                          <  1:416392/93‑1 (MQ=255)
                                                                  tgcGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAg                       >  2:588711/1‑93 (MQ=255)
                                                                  tgcGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAg                       >  1:6079318/1‑93 (MQ=255)
                                                                  tgcGCGAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAg                       >  2:5111186/1‑93 (MQ=255)
                                                                    cgcgAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGAc                     <  2:5783806/93‑1 (MQ=255)
                                                                    cgcgAACTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGAc                     <  2:4440384/93‑1 (MQ=255)
                                                                        aaCTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTa                 >  1:19315/1‑93 (MQ=255)
                                                                         aCTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTaa                <  2:5435034/93‑1 (MQ=255)
                                                                         aCTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTaa                >  2:5750057/1‑93 (MQ=255)
                                                                         aCTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTaa                <  1:3263111/93‑1 (MQ=255)
                                                                          cTGGCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAAt               <  2:1080701/93‑1 (MQ=255)
                                                                             gCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGtt            <  1:5483847/93‑1 (MQ=255)
                                                                             gCGTCGTTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGtt            >  1:5922013/1‑93 (MQ=255)
                                                                               gtcgtTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGa          >  1:3362744/1‑93 (MQ=255)
                                                                                 cgtTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGaaa        <  2:4192789/93‑1 (MQ=255)
                                                                                 cgtTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGaaa        <  2:1715250/93‑1 (MQ=255)
                                                                                 cgtTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGaaa        >  2:762860/1‑93 (MQ=255)
                                                                                 cgtTAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGaaa        <  1:2634299/93‑1 (MQ=255)
                                                                                   ttAATGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAgc      >  1:2103073/1‑93 (MQ=255)
                                                                                     aaTGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCTACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAgcgc    <  1:687503/93‑1 (MQ=255)
                                                                                      aTGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAgcgcg   <  1:572436/93‑1 (MQ=255)
                                                                                       tGCCGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAgcgcgc  <  2:2848163/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCTGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAGCGCGC  >  NC_000913/2143440‑2143619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: