BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,289,578	G→A	L285L (CTG→TTG)	ccmH ←	CcmH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,289,578	0	G	A	99.2%	919.1 / NA	255	L285L (CTG→TTG)	ccmH	CcmH
Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (123/129); minor base C (1/1); total (124/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 261 total aligned reads displayed.

GCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGT  >  NC_000913/2289490‑2289667

gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       >  1:433485/1‑93 (MQ=255)

gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       <  2:2207193/93‑1 (MQ=255)

gCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGa                                                                                       >  2:2013086/1‑93 (MQ=255)

 cAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGAc                                                                                      <  1:735716/93‑1 (MQ=255)

  aaCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACg                                                                                     <  2:4151731/93‑1 (MQ=255)

  aaCGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACg                                                                                     >  2:1265842/1‑93 (MQ=255)

    cGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTa                                                                                   >  2:5637612/1‑93 (MQ=255)

     ggCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAg                                                                                  >  2:685034/1‑93 (MQ=255)

     ggCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAg                                                                                  >  2:5890286/1‑93 (MQ=255)

         tCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGt                                                                              <  2:1685848/93‑1 (MQ=255)

         tCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGt                                                                              <  2:5789368/93‑1 (MQ=255)

         tCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGt                                                                              <  2:923143/93‑1 (MQ=255)

          cGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGtt                                                                             <  1:1710864/93‑1 (MQ=255)

           gCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTc                                                                            >  2:5034613/1‑93 (MQ=255)

            ccAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCa                                                                           <  2:3542918/93‑1 (MQ=255)

             cAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAc                                                                          <  1:4925561/93‑1 (MQ=255)

             cAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAc                                                                          >  1:1227070/1‑93 (MQ=255)

             cAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAc                                                                          <  1:959086/93‑1 (MQ=255)

              aaaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGTCGTAGCAGTTCAcc                                                                         >  1:3599820/1‑93 (MQ=255)

              aaaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAcc                                                                         <  1:6235595/93‑1 (MQ=255)

              aaaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAcc                                                                         <  1:2498123/93‑1 (MQ=255)

               aaTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccg                                                                        <  2:3743760/93‑1 (MQ=255)

                aTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgc                                                                       <  2:5200883/93‑1 (MQ=255)

                aTCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgc                                                                       <  2:1713115/93‑1 (MQ=255)

                 tCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgcc                                                                      <  2:4918108/93‑1 (MQ=255)

                  cGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCAccgccg                                                                     <  2:3066849/93‑1 (MQ=255)

                   gctgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGa                                                                    >  1:1071292/1‑93 (MQ=255)

                   gctgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGa                                                                    <  2:2817918/93‑1 (MQ=255)

                   gctgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGa                                                                    <  1:22509/93‑1 (MQ=255)

                     tgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAgg                                                                  <  1:2033685/93‑1 (MQ=255)

                     tgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAgg                                                                  <  2:2141831/93‑1 (MQ=255)

                     tgctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAgg                                                                  >  2:2631422/1‑93 (MQ=255)

                      gctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGc                                                                 <  1:768265/93‑1 (MQ=255)

                      gctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGc                                                                 >  2:4782494/1‑93 (MQ=255)

                      gctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGc                                                                 >  1:5015151/1‑93 (MQ=255)

                      gctgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGc                                                                 >  2:2525845/1‑93 (MQ=255)

                        tgctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCgg                                                               <  2:1171401/93‑1 (MQ=255)

                          ctCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGtt                                                             <  2:2275009/93‑1 (MQ=255)

                            cAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGt                                                           >  2:5985151/1‑93 (MQ=255)

                            cAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGt                                                           <  1:4119688/93‑1 (MQ=255)

                                ggCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGtt                                                       <  2:1476646/93‑1 (MQ=255)

                                  gaTTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTgg                                                     <  1:3396747/92‑1 (MQ=255)

                                  gaTTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTgg                                                     <  1:1591676/92‑1 (MQ=255)

                                  cATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTgg                                                     >  2:2070500/1‑93 (MQ=255)

                                  cATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTgg                                                     >  2:1120655/1‑93 (MQ=255)

                                    ttAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGa                                                   >  2:5700674/1‑93 (MQ=255)

                                    ttAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGa                                                   <  2:4294554/93‑1 (MQ=255)

                                      aaaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATc                                                 >  1:284516/1‑93 (MQ=255)

                                      aaaCGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATc                                                 <  1:833376/93‑1 (MQ=255)

                                          gCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGAt                                             >  1:4770618/1‑93 (MQ=255)

                                           cATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATg                                            >  2:3563610/1‑93 (MQ=255)

                                           cATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATg                                            >  1:3335441/1‑93 (MQ=255)

                                           cATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATg                                            >  1:4472800/1‑93 (MQ=255)

                                            aTACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGa                                           <  2:933430/93‑1 (MQ=255)

                                            aTACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGa                                           >  1:1099902/1‑93 (MQ=255)

                                            aTACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGa                                           <  1:5302878/93‑1 (MQ=255)

                                            aTACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGGTGTCGTTGGGTTCAGATGa                                           <  2:6122511/93‑1 (MQ=255)

                                             tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          <  2:3322286/93‑1 (MQ=255)

                                             tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          <  2:5838031/93‑1 (MQ=255)

                                             tACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGaa                                          <  2:2744040/93‑1 (MQ=255)

                                               cATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACg                                        >  2:5251409/1‑93 (MQ=255)

                                                 tGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAg                                      >  1:5759792/1‑93 (MQ=255)

                                                  gCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGt                                     >  2:3771515/1‑93 (MQ=255)

                                                  gCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGt                                     <  1:274456/93‑1 (MQ=255)

                                                  gCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGt                                     >  2:961312/1‑93 (MQ=255)

                                                   cTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTc                                    <  1:1809132/93‑1 (MQ=255)

                                                   cTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTc                                    <  2:4416280/93‑1 (MQ=255)

                                                    ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   >  2:2860582/1‑93 (MQ=255)

                                                    ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   >  1:1972395/1‑93 (MQ=255)

                                                    ttAGCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCa                                   <  2:1590239/93‑1 (MQ=255)

                                                     tAGCACACGGACATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCaa                                  >  1:4980169/1‑93 (MQ=255)

                                                       gCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACg                                >  1:234521/1‑93 (MQ=255)

                                                       gCACACGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACg                                >  1:3019490/1‑93 (MQ=255)

                                                         acacGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCt                              >  2:406805/1‑93 (MQ=255)

                                                            cGGATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCa                           <  1:4533327/93‑1 (MQ=255)

                                                             ggATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAg                          <  1:3226550/93‑1 (MQ=255)

                                                              gATATTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGc                         <  2:4024949/93‑1 (MQ=255)

                                                                tatTGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGt                       >  1:226761/1‑93 (MQ=255)

                                                                   tGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATc                    <  2:1835827/93‑1 (MQ=255)

                                                                   tGCTATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATc                    <  2:1016240/93‑1 (MQ=255)

                                                                      tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 <  2:5555284/93‑1 (MQ=255)

                                                                      tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 <  1:1422323/93‑1 (MQ=255)

                                                                      tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 >  1:4373994/1‑93 (MQ=255)

                                                                      tATGGTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCa                 >  2:1518190/1‑93 (MQ=255)

                                                                          gTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgc             <  1:3308414/93‑1 (MQ=255)

                                                                          gTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgc             <  2:3398382/93‑1 (MQ=255)

                                                                          gTCCGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATACCAGTgc             >  1:3510864/1‑93 (MQ=255)

                                                                             cGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagc          <  2:3370616/93‑1 (MQ=255)

                                                                             cGTTCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTgcagc          >  1:491336/1‑93 (MQ=255)

                                                                               ttCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCAt        >  1:2077576/1‑93 (MQ=255)

                                                                               ttCTCACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCAt        >  1:6103825/1‑93 (MQ=255)

                                                                                tctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATc       <  1:1373540/93‑1 (MQ=255)

                                                                                 ctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCa      <  2:3627082/93‑1 (MQ=255)

                                                                                 ctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCa      >  1:3931841/1‑93 (MQ=255)

                                                                                 ctcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCa      >  1:4055612/1‑93 (MQ=255)

                                                                                  tcACCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCAc     >  1:5498729/1‑93 (MQ=255)

                                                                                   ccccAACTGACGTAGCAGGTCGCCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCCCt    <  1:178816/91‑1 (MQ=255)

                                                                                    aCCAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTg   >  2:6205809/1‑93 (MQ=255)

                                                                                     ccAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGt  <  1:663308/93‑1 (MQ=255)

                                                                                     ccAACTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGt  <  2:869024/93‑1 (MQ=255)

GCAACGGCTTCGCCAAATCGCTGCTGCTCAAAGGCATTAAACGCATACATGCTTAGCACACGGATATTGCTATGGTCCGTTCTCACCAGCTGACGTAGCAGTTCACCGCCGAGGCGGTTGTCGTTGGGATCAGATGAACGAGTCAACGCTTCAGCGTATCCCAGTGCAGCATCACTGT  >  NC_000913/2289490‑2289667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`