BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,317,837	T→C	A4A (GCA→GCG)	rcsC ←	RcsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,317,837	0	T	C	100.0%	780.2 / NA	240	A4A (GCA→GCG)	rcsC	RcsC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/124); total (116/124)

Only 100 of 245 total aligned reads displayed.

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  1:1054590/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        <  1:5094562/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        <  2:3734499/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:4728973/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:5880699/1‑93 (MQ=255)

 tGACGAATTTCAGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGACAGAGCACTAACGCCAACGct                                                                                        >  2:4188384/1‑93 (MQ=255)

     gAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGa                                                                                    >  2:780308/1‑93 (MQ=255)

      aaTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGaa                                                                                   <  2:4456530/93‑1 (MQ=255)

       aTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAc                                                                                  <  2:677624/93‑1 (MQ=255)

        tttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACa                                                                                 >  1:806876/1‑93 (MQ=255)

          tCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATg                                                                               <  2:5550848/93‑1 (MQ=255)

           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              <  2:1313938/93‑1 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:3676726/93‑1 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  2:6287676/93‑1 (MQ=255)

             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAACCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            <  2:4059892/93‑1 (MQ=255)

             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            <  1:5435624/93‑1 (MQ=255)

             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            >  1:5980406/1‑93 (MQ=255)

             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            >  2:1027154/1‑93 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           >  1:3633742/1‑93 (MQ=255)

                tctcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcgc                                                                         <  1:3025543/93‑1 (MQ=255)

                tctcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcgc                                                                         >  2:1975047/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  1:481313/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  2:65159/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  2:2331161/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       <  1:370582/93‑1 (MQ=255)

                   cGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAg                                                                      <  2:1658074/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCATAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   >  2:5523715/1‑93 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   <  1:4721600/93‑1 (MQ=255)

                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  <  2:1362110/93‑1 (MQ=255)

                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  >  2:5036015/1‑93 (MQ=255)

                        aTGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCttt                                                                 >  1:2615988/1‑93 (MQ=255)

                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               >  1:5657375/1‑93 (MQ=255)

                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               <  1:194065/93‑1 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             <  2:2313255/93‑1 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             <  1:5170128/93‑1 (MQ=255)

                             aCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAggg                                                            <  2:1675607/93‑1 (MQ=255)

                             aCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAggg                                                            <  2:2749449/93‑1 (MQ=255)

                              cGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGt                                                           <  1:4233533/93‑1 (MQ=255)

                                 aTTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        >  1:717363/1‑93 (MQ=255)

                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    >  2:5905381/1‑93 (MQ=255)

                                       gATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaa                                                  >  2:669782/1‑93 (MQ=255)

                                         tGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaag                                                >  1:2174919/1‑93 (MQ=255)

                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               <  2:262830/93‑1 (MQ=255)

                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               <  1:376585/93‑1 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:4526944/93‑1 (MQ=255)

                                            aaaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaag                                             <  1:6038844/93‑1 (MQ=255)

                                               aaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCaa                                          <  2:296479/93‑1 (MQ=255)

                                               aaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCaa                                          <  1:1386824/93‑1 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        <  2:3560348/93‑1 (MQ=255)

                                                  cGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGt                                       <  2:866388/93‑1 (MQ=255)

                                                  cGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGt                                       <  1:384213/93‑1 (MQ=255)

                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  1:3189531/93‑1 (MQ=255)

                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  2:4851593/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTTCGAAAAGAAGCAAGGTAtt                                    <  1:1164067/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  2:610489/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:3153471/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    >  2:5142022/1‑93 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   >  1:2508877/1‑93 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   >  1:22599/1‑93 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   >  2:5102854/1‑93 (MQ=255)

                                                        aaaaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCa                                 >  2:109179/1‑93 (MQ=255)

                                                        aaaaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCa                                 >  1:411357/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:5554084/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  1:4596247/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  2:5242237/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  1:2870727/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:3127823/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:328119/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  1:3333417/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  1:3457814/93‑1 (MQ=255)

                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              >  2:2799446/1‑93 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             <  2:2661203/93‑1 (MQ=255)

                                                              cAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           >  1:2329460/1‑93 (MQ=255)

                                                              cAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           <  2:3927154/93‑1 (MQ=255)

                                                               aaTCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          <  1:3946546/93‑1 (MQ=255)

                                                               aaTCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          >  1:6079454/1‑93 (MQ=255)

                                                                aTCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCg                         >  2:1529179/1‑93 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      <  1:758489/93‑1 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      >  1:2058270/1‑93 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      <  2:6172469/93‑1 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  >  1:4386597/1‑93 (MQ=255)

                                                                        ccAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCg                 <  2:4698012/93‑1 (MQ=255)

                                                                         cAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGc                >  1:4366628/1‑93 (MQ=255)

                                                                          agagCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGcc               >  2:1607222/1‑93 (MQ=255)

                                                                           gagCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCt              >  2:1945829/1‑93 (MQ=255)

                                                                           gagCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCt              >  1:1725239/1‑93 (MQ=255)

                                                                            agCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTc             <  1:3574241/93‑1 (MQ=255)

                                                                            agCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTc             >  2:5762678/1‑93 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            <  2:1389431/93‑1 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            <  1:1600619/93‑1 (MQ=255)

                                                                                cTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGt         >  2:1566859/1‑93 (MQ=255)

                                                                                cTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGt         <  2:1441583/93‑1 (MQ=255)

                                                                                cTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGt         >  2:4316501/1‑93 (MQ=255)

                                                                                cTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGt         <  1:4034252/93‑1 (MQ=255)

                                                                                 tAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTg        >  2:3432448/1‑93 (MQ=255)

                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  1:1521864/93‑1 (MQ=255)

                                                                                      ccAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGa   <  2:3595728/93‑1 (MQ=255)

                                                                                      ccAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGa   >  1:1712189/1‑93 (MQ=255)

                                                                                      ccAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGa   <  2:2060952/93‑1 (MQ=255)

                                                                                       cAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAt  <  2:3311981/93‑1 (MQ=255)

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`