BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,375,871	T→C	N470S (AAC→AGC)	menD ←	2‑oxoglutarate decarboxylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,375,871	0	T	C	100.0%	657.4 / NA	206	N470S (AAC→AGC)	menD	2‑oxoglutarate decarboxylase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/108); total (98/108)

Only 100 of 231 total aligned reads displayed.

GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCC  >  NC_000913/2375781‑2375960

gcgTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctg                                                                                         >  1:5725101/1‑93 (MQ=255)

 cgTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgt                                                                                        <  1:4229523/93‑1 (MQ=255)

 cgTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgt                                                                                        <  2:3754751/93‑1 (MQ=255)

 cgTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCAAGAAAATTTGCCCGCCgctgt                                                                                        <  1:4363259/93‑1 (MQ=255)

    gCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttgt                                                                                     >  2:3908011/1‑93 (MQ=255)

      tCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTc                                                                                   >  2:4720171/1‑93 (MQ=255)

      tCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTc                                                                                   >  1:3050052/1‑93 (MQ=255)

       cAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTca                                                                                  <  2:4978130/93‑1 (MQ=255)

        aaaaTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcac                                                                                 <  1:5504631/93‑1 (MQ=255)

           aTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGGCCGCAGCTGTTGTTaaccaa                                                                              >  2:4165089/1‑92 (MQ=255)

           aTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcaccac                                                                              >  1:4564880/1‑93 (MQ=255)

             ggACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACaa                                                                            >  1:5859950/1‑93 (MQ=255)

              gACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAAt                                                                           >  1:3987549/1‑93 (MQ=255)

                cGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTa                                                                         >  2:6274902/1‑93 (MQ=255)

                 cttttGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTaa                                                                        <  1:5282835/92‑1 (MQ=255)

                  ttttGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTACCCGCCGCTGTTGTTCACCACAATTaac                                                                       >  1:6060629/1‑92 (MQ=255)

                     tGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACAcc                                                                    >  1:256528/1‑93 (MQ=255)

                      gCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCa                                                                   <  1:3657888/93‑1 (MQ=255)

                        ggCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAgc                                                                 <  1:1950238/93‑1 (MQ=255)

                          cATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAgcgg                                                               >  1:2499415/1‑93 (MQ=255)

                           aTCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAgcggc                                                              <  1:3206099/93‑1 (MQ=255)

                           aTCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAgcggc                                                              >  2:1045817/1‑93 (MQ=255)

                               gATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAg                                                          >  2:364450/1‑93 (MQ=255)

                               gATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAg                                                          >  1:5143855/1‑93 (MQ=255)

                               gATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAg                                                          >  1:4483371/1‑93 (MQ=255)

                                aTAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGa                                                         <  2:3210669/93‑1 (MQ=255)

                                 tAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGaa                                                        <  1:4106576/93‑1 (MQ=255)

                                 tAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGaa                                                        >  1:1011086/1‑93 (MQ=255)

                                 tAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGaa                                                        >  2:5605811/1‑93 (MQ=255)

                                  aGAACCGCTCACGCTCGCTTGGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGaaa                                                       <  2:5319053/93‑1 (MQ=255)

                                   gAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAAc                                                      <  1:2976315/93‑1 (MQ=255)

                                     aaCGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCt                                                    >  1:2702042/1‑93 (MQ=255)

                                       cgctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGa                                                  <  2:790419/93‑1 (MQ=255)

                                        gctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAAACTGAc                                                 >  1:331192/1‑93 (MQ=255)

                                         ctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCTCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACg                                                >  1:4089124/1‑93 (MQ=255)

                                         ctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTTACCACAATTAACACCAGCGGCGCAGAAACCTGACg                                                >  2:4371184/1‑93 (MQ=255)

                                         ctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACg                                                <  2:1561381/93‑1 (MQ=255)

                                          tcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGc                                               >  1:6219156/1‑93 (MQ=255)

                                               ctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATaa                                          >  2:2474489/1‑93 (MQ=255)

                                               ctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATaa                                          <  2:693408/93‑1 (MQ=255)

                                                tcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAAc                                         >  1:3622118/1‑93 (MQ=255)

                                                tcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAAc                                         >  2:2068449/1‑93 (MQ=255)

                                                 cgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACg                                        <  1:5636270/93‑1 (MQ=255)

                                                  gctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAACGGCGCAGAAAACTGACGCCATAAAGc                                       >  1:4302427/1‑93 (MQ=255)

                                                   ctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACgtc                                      >  1:1862351/1‑91 (MQ=255)

                                                   ctTTGCGGCGTTGGCAACAGCGAGAAAATTTCCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGcc                                      <  1:2761574/93‑1 (MQ=255)

                                                    tttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAAAGCCa                                     >  1:1315705/1‑93 (MQ=255)

                                                    ttggcggcgTGGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCa                                     <  2:4481802/90‑1 (MQ=255)

                                                     ttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAg                                    <  2:3062212/93‑1 (MQ=255)

                                                     ttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAg                                    <  2:2533369/93‑1 (MQ=255)

                                                     ttGCGCCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAg                                    <  2:1838466/93‑1 (MQ=255)

                                                         ggcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCCCAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGcccgcccg                                >  2:4356700/1‑93 (MQ=255)

                                                          gcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGt                               >  1:140657/1‑93 (MQ=255)

                                                           cgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGtt                              <  1:5807051/93‑1 (MQ=255)

                                                            gTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTTACCACCAATAAAACCCACGGGGCCCAAAACCGACGGAAAAAAGCCAGCGCGGTg                             >  2:4324129/1‑93 (MQ=255)

                                                             ttGGCAACAGCGAGAGAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTga                            >  1:5117073/1‑93 (MQ=255)

                                                             ttGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTga                            <  1:4765727/93‑1 (MQ=255)

                                                               ggCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          >  2:5835787/1‑93 (MQ=255)

                                                               ggCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  1:2928968/93‑1 (MQ=255)

                                                               ggCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  1:5380796/93‑1 (MQ=255)

                                                               ggCAAAAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  2:6001411/93‑1 (MQ=255)

                                                                gCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAt                         >  2:4434526/1‑93 (MQ=255)

                                                                gCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAt                         <  2:4557446/93‑1 (MQ=255)

                                                                gCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAt                         >  1:2083068/1‑93 (MQ=255)

                                                                gCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGAGTTGAGAt                         <  2:6149132/93‑1 (MQ=255)

                                                                 cAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAta                        >  2:4659298/1‑92 (MQ=255)

                                                                   aCAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGt                      <  2:1759570/93‑1 (MQ=255)

                                                                    cAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTa                     <  1:1645295/93‑1 (MQ=255)

                                                                    cAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTa                     <  1:4125707/93‑1 (MQ=255)

                                                                    cAGAGAGAAACTTGCCCCGCCGCTTTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTa                     <  2:2188233/93‑1 (MQ=255)

                                                                     aGCGAGAAAATTTGCCCGGCCCGGTTGTTTACCACAATTAACACCAGCGGCGCAGAAAACTGACGCAATAAAGGCACGGCGTTGAGAGCGGaa                    >  2:2314683/1‑93 (MQ=255)

                                                                      gCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTaaa                   <  1:4151838/93‑1 (MQ=255)

                                                                       gcagaAAATTGGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAg                  <  1:3114301/91‑1 (MQ=255)

                                                                       cGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAg                  >  2:3848950/1‑93 (MQ=255)

                                                                       cGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAg                  <  2:5676642/93‑1 (MQ=255)

                                                                        gagaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGt                 <  1:4611565/93‑1 (MQ=255)

                                                                        gagaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGt                 <  2:6104955/93‑1 (MQ=255)

                                                                        gagaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGt                 <  2:2164739/93‑1 (MQ=255)

                                                                        gagaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGGTGAGATCGTAAAGt                 >  2:3538544/1‑93 (MQ=255)

                                                                         agaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTg                >  2:5090176/1‑93 (MQ=255)

                                                                         agaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTg                >  2:1444184/1‑93 (MQ=255)

                                                                          gaAAATTTCCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGc               <  2:2882622/93‑1 (MQ=255)

                                                                          aaaaaTTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGc               <  2:5799185/92‑1 (MQ=255)

                                                                           aaaaTTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCg              <  2:3994520/93‑1 (MQ=255)

                                                                           aaaaTTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCg              >  1:5502529/1‑93 (MQ=255)

                                                                            aaaTTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCgg             <  1:5024795/93‑1 (MQ=255)

                                                                             aaTTTGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGga            >  2:2005946/1‑93 (MQ=255)

                                                                               tttGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgaga          <  2:6211062/93‑1 (MQ=255)

                                                                               tttGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAACGCGTTGAGATCGTAAAGTGCGgagc          >  1:659377/1‑92 (MQ=255)

                                                                               tttGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAAACTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagg          >  1:5818657/1‑92 (MQ=255)

                                                                                ttGCCCGTCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagag         >  2:5986631/1‑93 (MQ=255)

                                                                                ttGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagag         <  2:2632119/93‑1 (MQ=255)

                                                                                 tGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagaga        <  2:4104507/93‑1 (MQ=255)

                                                                                 tGCCCGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagaga        >  1:5236152/1‑93 (MQ=255)

                                                                                   cccGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATc      >  1:3563773/1‑93 (MQ=255)

                                                                                   cccGCCGCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATc      <  1:2630707/93‑1 (MQ=255)

                                                                                     cgccgcTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGc    <  2:1891718/93‑1 (MQ=255)

                                                                                      gccgCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGcc   <  2:2392242/93‑1 (MQ=255)

                                                                                       ccgCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGccc  >  2:2814550/1‑93 (MQ=255)

                                                                                       ccgCTGTTGTTCACCACAATTAACACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGccc  <  2:765485/93‑1 (MQ=255)

GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCC  >  NC_000913/2375781‑2375960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`