BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,392,487	T→C	T194A (ACC→GCC)	nuoL ←	NADH dehydrogenase I chain L

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,392,487	0	T	C	100.0%	612.3 / NA	192	T194A (ACC→GCC)	nuoL	NADH dehydrogenase I chain L
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/90); total (102/90)

Only 100 of 199 total aligned reads displayed.

CCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGCGC  >  NC_000913/2392397‑2392576

ccAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGgcgc                                                                                         >  1:1391329/1‑93 (MQ=255)

ccAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGgcgc                                                                                         >  1:1713230/1‑93 (MQ=255)

 cagcagCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGcc                                                                                        >  1:3987356/1‑93 (MQ=255)

 cagcagCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGcc                                                                                        >  1:1964480/1‑93 (MQ=255)

  agcagcATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                       >  1:2797665/1‑93 (MQ=255)

   gcagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCa                                                                                      >  2:3031498/1‑93 (MQ=255)

    cagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAg                                                                                     <  2:1925206/93‑1 (MQ=255)

    cagcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAg                                                                                     <  2:3207463/93‑1 (MQ=255)

     agcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGt                                                                                    <  1:6255009/93‑1 (MQ=255)

      gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                   >  2:4428178/1‑93 (MQ=255)

      gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                   <  1:3350889/93‑1 (MQ=255)

      gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                   <  1:3218356/93‑1 (MQ=255)

         tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                                >  2:5826713/1‑93 (MQ=255)

         tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                                <  2:3750246/93‑1 (MQ=255)

         tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                                <  1:5881378/93‑1 (MQ=255)

         tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                                <  1:3676227/93‑1 (MQ=255)

          cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                               >  1:2754839/1‑93 (MQ=255)

          cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                               <  2:448351/93‑1 (MQ=255)

           aGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTg                                                                              >  1:1858551/1‑93 (MQ=255)

            gCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGt                                                                             >  2:5424958/1‑93 (MQ=255)

            gCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGt                                                                             >  1:2868964/1‑93 (MQ=255)

              gTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaa                                                                           >  2:1584171/1‑93 (MQ=255)

              gTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaa                                                                           >  2:2518459/1‑93 (MQ=255)

              ctCGCCCACATCAGCATGTAATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaa                                                                           <  2:2746066/92‑1 (MQ=255)

               tCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaaa                                                                          <  2:4778124/93‑1 (MQ=255)

               tCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaaa                                                                          <  2:87323/93‑1 (MQ=255)

               gcGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaaa                                                                          <  2:2629464/92‑1 (MQ=255)

                cGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAg                                                                         <  2:1830949/93‑1 (MQ=255)

                 gCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGa                                                                        <  1:1447687/93‑1 (MQ=255)

                  cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                       >  2:2732895/1‑93 (MQ=255)

                    cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                     >  2:2394965/1‑93 (MQ=255)

                    cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                     >  1:4280743/1‑93 (MQ=255)

                    cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                     >  1:931052/1‑93 (MQ=255)

                      caTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAagaaagaa                                                                   >  2:743470/1‑93 (MQ=255)

                        tCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACa                                                                 >  1:1604462/1‑93 (MQ=255)

                         cAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGCATGAACAg                                                                <  2:6147037/93‑1 (MQ=255)

                          aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               >  1:2688782/1‑93 (MQ=255)

                          aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               >  1:1027270/1‑93 (MQ=255)

                          aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               >  1:6203203/1‑93 (MQ=255)

                          aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                               <  1:569582/93‑1 (MQ=255)

                           gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTg                                                              >  1:6194074/1‑93 (MQ=255)

                           gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTg                                                              <  1:1516541/93‑1 (MQ=255)

                           gCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTg                                                              <  2:1300189/93‑1 (MQ=255)

                            cATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACAATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGc                                                             <  2:4334141/93‑1 (MQ=255)

                             aTGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCg                                                            >  1:1169929/1‑93 (MQ=255)

                              tGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGa                                                           >  2:2153870/1‑93 (MQ=255)

                                  aTTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                       <  1:5761036/93‑1 (MQ=255)

                                   ttGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCg                                                      >  1:1252662/1‑93 (MQ=255)

                                   ttGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCg                                                      >  2:4090499/1‑93 (MQ=255)

                                    tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGa                                                     <  1:25235/93‑1 (MQ=255)

                                    tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGa                                                     <  2:4754387/93‑1 (MQ=255)

                                    tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGGGCGAAAGCGa                                                     <  2:3854987/93‑1 (MQ=255)

                                     gCCGTCATCAAAGTGCGCTGGGCCCAGTTCCACCATTTCGGGGAAGTTCAGGGCTGCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAg                                                    <  2:56640/93‑1 (MQ=255)

                                     gCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAg                                                    >  1:1016609/1‑93 (MQ=255)

                                      ccGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAgg                                                   >  2:5913541/1‑93 (MQ=255)

                                      ccGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCACCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAgg                                                   <  1:4549631/93‑1 (MQ=255)

                                         tCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGaaa                                                >  2:4194524/1‑92 (MQ=255)

                                         tCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAac                                                <  2:4636898/93‑1 (MQ=255)

                                         tCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAac                                                >  1:6005841/1‑93 (MQ=255)

                                         tCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAac                                                <  1:31107/93‑1 (MQ=255)

                                           aGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAacac                                              >  1:6154522/1‑93 (MQ=255)

                                            gCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACg                                             >  2:1393071/1‑93 (MQ=255)

                                             cAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGt                                            >  2:1172634/1‑93 (MQ=255)

                                             cAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGt                                            <  2:632701/93‑1 (MQ=255)

                                              aaaGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTc                                           >  2:863448/1‑93 (MQ=255)

                                               aaGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCa                                          >  2:5238596/1‑93 (MQ=255)

                                               aaGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGACa                                          >  2:3291478/1‑93 (MQ=255)

                                                 gTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAcc                                        >  2:4582523/1‑93 (MQ=255)

                                                 gTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAcc                                        <  2:6258871/93‑1 (MQ=255)

                                                     gcTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTGCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCcaca                                    <  1:2290834/93‑1 (MQ=255)

                                                       tGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACg                                  >  1:2544517/1‑93 (MQ=255)

                                                       tGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACg                                  <  2:4822832/93‑1 (MQ=255)

                                                          tGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACgggc                               >  2:5153347/1‑92 (MQ=255)

                                                           gCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTc                              <  2:1531267/93‑1 (MQ=255)

                                                            ccAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCa                             <  2:4964296/93‑1 (MQ=255)

                                                            ccAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCa                             >  1:5140219/1‑93 (MQ=255)

                                                              aGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacg                           <  2:5946089/93‑1 (MQ=255)

                                                               gTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacga                          >  1:1024835/1‑93 (MQ=255)

                                                               gTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacga                          >  2:4142465/1‑93 (MQ=255)

                                                                 tCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacgacg                        >  1:6077154/1‑93 (MQ=255)

                                                                   caccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGaa                      <  2:1709756/93‑1 (MQ=255)

                                                                    accaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAAc                     >  1:5833120/1‑93 (MQ=255)

                                                                      caTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGc                   >  1:5053044/1‑93 (MQ=255)

                                                                       aTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCt                  >  2:3284760/1‑93 (MQ=255)

                                                                       aTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCt                  >  1:2307631/1‑93 (MQ=255)

                                                                       aTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCt                  <  1:3818360/93‑1 (MQ=255)

                                                                         ttCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCttt                <  1:4513390/93‑1 (MQ=255)

                                                                          tCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTc               <  1:4120738/93‑1 (MQ=255)

                                                                            gcgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCAt             >  2:4517488/1‑93 (MQ=255)

                                                                            gcgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCAt             >  1:1464102/1‑93 (MQ=255)

                                                                              ggAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTg           <  1:2853814/93‑1 (MQ=255)

                                                                               gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc          >  1:5313983/1‑93 (MQ=255)

                                                                               gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc          >  2:1482663/1‑93 (MQ=255)

                                                                               gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc          >  1:3953872/1‑93 (MQ=255)

                                                                                aaGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGcc         <  1:87550/93‑1 (MQ=255)

                                                                                  gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc       >  1:3251637/1‑93 (MQ=255)

                                                                                    tCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTg     >  1:636725/1‑93 (MQ=255)

                                                                                     cAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc    <  2:2000073/93‑1 (MQ=255)

                                                                                      aGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgcg   >  1:4822452/1‑93 (MQ=255)

                                                                                      aGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgcg   >  1:4193790/1‑93 (MQ=255)

CCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGCGC  >  NC_000913/2392397‑2392576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`