BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,417,813	T→C	intergenic (‑8/+48)	b2300 ← / ← yfcF	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,417,813	0	T	C	100.0%	696.5 / NA	215	intergenic (‑8/+48)	b2300/yfcF	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/100); total (115/100)

Only 100 of 240 total aligned reads displayed.

GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC  >  NC_000913/2417723‑2417902

gCACCGCTTTGGGCAAACAGCTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccc                                                                                         <  2:2658360/93‑1 (MQ=255)

gCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccc                                                                                         <  1:4127476/93‑1 (MQ=255)

 cACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccct                                                                                        <  1:1187780/93‑1 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                      >  2:4397383/1‑93 (MQ=255)

    cGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgt                                                                                     >  2:717328/1‑93 (MQ=255)

     gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc                                                                                    >  1:2987432/1‑93 (MQ=255)

     gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc                                                                                    <  1:1929948/93‑1 (MQ=255)

      cTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtcg                                                                                   >  2:1111644/1‑93 (MQ=255)

       tttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGa                                                                                  >  2:1630156/1‑93 (MQ=255)

          gggCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGaaaa                                                                               >  1:4240191/1‑93 (MQ=255)

              aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACg                                                                           >  1:2171518/1‑93 (MQ=255)

               aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGt                                                                          >  2:6271338/1‑93 (MQ=255)

                acaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTa                                                                         <  2:6231660/93‑1 (MQ=255)

                  aacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAg                                                                       >  1:140193/1‑93 (MQ=255)

                   acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCACACATCAGTTTCATCACTCACCCCTCGTCGCAAAAACGTAAGc                                                                      >  1:2520276/1‑93 (MQ=255)

                   acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc                                                                      >  2:1885167/1‑93 (MQ=255)

                   acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc                                                                      >  1:462195/1‑93 (MQ=255)

                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                    <  1:4962349/93‑1 (MQ=255)

                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                    >  2:2471979/1‑93 (MQ=255)

                     tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                    <  1:5301465/93‑1 (MQ=255)

                       cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg                                                                  <  2:3299089/93‑1 (MQ=255)

                       cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg                                                                  >  1:4741494/1‑93 (MQ=255)

                        aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa                                                                 <  1:265251/93‑1 (MQ=255)

                         gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt                                                                >  1:4172068/1‑93 (MQ=255)

                         gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt                                                                >  2:1040157/1‑93 (MQ=255)

                            cacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt                                                             >  2:1588874/1‑93 (MQ=255)

                            cacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt                                                             >  2:3632934/1‑93 (MQ=255)

                            cacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt                                                             <  1:2364050/93‑1 (MQ=255)

                             acGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTg                                                            >  2:4629767/1‑93 (MQ=255)

                              cGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTgg                                                           >  2:4646428/1‑93 (MQ=255)

                               gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa                                                          >  1:5048590/1‑93 (MQ=255)

                                ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt                                                         >  2:349678/1‑93 (MQ=255)

                                ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt                                                         >  2:2838739/1‑93 (MQ=255)

                                ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt                                                         >  1:2918860/1‑93 (MQ=255)

                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCACACATCAGTTGCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                       <  1:5928861/93‑1 (MQ=255)

                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                       <  2:2037189/93‑1 (MQ=255)

                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                       <  2:2874494/93‑1 (MQ=255)

                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                       <  2:2995875/93‑1 (MQ=255)

                                   cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt                                                      <  1:3588381/93‑1 (MQ=255)

                                    gTCGCCGGTAACGACCCATGACTGTTCCATGCAAATATGAGGTTCATCACTCACCCCTCGACGAAAAAACGTAAGCTCTTATACTGTAGTCTg                                                     >  2:5962488/1‑93 (MQ=255)

                                    gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg                                                     <  2:883051/93‑1 (MQ=255)

                                        ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCATTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt                                                 <  1:4909495/93‑1 (MQ=255)

                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                                <  1:6058541/93‑1 (MQ=255)

                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                                <  1:3905219/93‑1 (MQ=255)

                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                                >  2:3379198/1‑93 (MQ=255)

                                           gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc                                              >  2:3045641/1‑93 (MQ=255)

                                              aCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTAt                                           >  2:1147621/1‑93 (MQ=255)

                                               cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc                                          <  2:2325116/93‑1 (MQ=255)

                                               cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc                                          >  1:6251375/1‑93 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                         >  2:6052210/1‑93 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                         <  2:5050521/93‑1 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                         >  2:4548312/1‑93 (MQ=255)

                                                gACCCATGAATGTCCAATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                         >  2:2141927/1‑93 (MQ=255)

                                                 aCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAg                                        >  1:2722812/1‑93 (MQ=255)

                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                     >  2:4105998/1‑93 (MQ=255)

                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                     >  2:5537635/1‑93 (MQ=255)

                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                     <  1:4385248/93‑1 (MQ=255)

                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                     <  1:1539666/93‑1 (MQ=255)

                                                     aTGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAg                                    >  1:2246015/1‑93 (MQ=255)

                                                      tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa                                   >  1:207662/1‑93 (MQ=255)

                                                      agAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa                                   <  1:3645439/92‑1 (MQ=255)

                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                 <  1:1233125/93‑1 (MQ=255)

                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                 <  2:3135197/93‑1 (MQ=255)

                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                 >  1:5854707/1‑93 (MQ=255)

                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                 >  1:5148384/1‑93 (MQ=255)

                                                         aTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTg                                <  1:1744066/93‑1 (MQ=255)

                                                           gTCCGATGCAAATATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCt                              >  2:5871795/1‑93 (MQ=255)

                                                           gTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCt                              >  2:5384526/1‑93 (MQ=255)

                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                             <  2:637819/93‑1 (MQ=255)

                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                             >  1:708842/1‑93 (MQ=255)

                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                             >  2:3763769/1‑93 (MQ=255)

                                                             ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTCTGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc                            <  2:5135423/93‑1 (MQ=255)

                                                             ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc                            <  1:2563680/93‑1 (MQ=255)

                                                              cgttGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCg                           <  2:4677908/90‑1 (MQ=255)

                                                              cGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCg                           >  1:3168601/1‑93 (MQ=255)

                                                               gATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGc                          >  2:1504559/1‑93 (MQ=255)

                                                                aTGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGcc                         <  2:5608265/93‑1 (MQ=255)

                                                                  gCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGa                       <  2:3933447/93‑1 (MQ=255)

                                                                  gCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGa                       >  1:3328024/1‑93 (MQ=255)

                                                                   cAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTAGCCGaa                      >  1:4645508/1‑93 (MQ=255)

                                                                    aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa                     >  1:6149348/1‑93 (MQ=255)

                                                                      aCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGt                   >  1:2789719/1‑93 (MQ=255)

                                                                      aCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGt                   >  1:5462448/1‑93 (MQ=255)

                                                                          cattttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa               <  2:5301944/90‑1 (MQ=255)

                                                                          cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAGTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa               <  2:1206469/93‑1 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCTAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt              >  1:5706536/1‑93 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt              <  2:493045/93‑1 (MQ=255)

                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa          >  1:907946/1‑93 (MQ=255)

                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa          <  1:3631488/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc         <  1:5570893/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc         <  1:4006626/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc         >  1:4559042/1‑93 (MQ=255)

                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg        >  1:5729985/1‑93 (MQ=255)

                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg        >  2:1730410/1‑93 (MQ=255)

                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc       >  2:3420143/1‑93 (MQ=255)

                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTAGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc       <  2:1917091/93‑1 (MQ=255)

                                                                                   cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt      >  1:1691295/1‑93 (MQ=255)

                                                                                    cctcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg     <  2:1660548/92‑1 (MQ=255)

                                                                                    actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg     <  2:2696624/93‑1 (MQ=255)

                                                                                      tcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGa   <  2:2547788/93‑1 (MQ=255)

GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC  >  NC_000913/2417723‑2417902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`