BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,429,483	T→C	E65E (GAA→GAG)	dedD ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,429,483	0	T	C	99.5%	672.7 / NA	211	E65E (GAA→GAG)	dedD	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (111/99); total (111/100)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 228 total aligned reads displayed.

GACCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCGG  >  NC_000913/2429393‑2429572

 aCCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCAcctct                                                                                        <  1:4292820/93‑1 (MQ=255)

 aCCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGGGCTGCGGCATCACCTGCCCGCAcctct                                                                                        >  2:5602873/1‑93 (MQ=255)

  ccGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCAcctctt                                                                                       <  1:256051/93‑1 (MQ=255)

    ggTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTcc                                                                                     <  1:2356696/93‑1 (MQ=255)

      tGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGc                                                                                   >  2:3436081/1‑93 (MQ=255)

       gCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCt                                                                                  <  1:277170/93‑1 (MQ=255)

       gCAGGTTCCGGTTCAAACCCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACCGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCt                                                                                  >  1:1217031/1‑93 (MQ=255)

         aGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgc                                                                                >  2:304292/1‑93 (MQ=255)

           gTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgcgc                                                                              <  1:5686001/93‑1 (MQ=255)

            ttCCGGTTCAAACTCGGTGTTATTGGCTGGAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGcc                                                                             >  1:4727034/1‑93 (MQ=255)

            ttCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGcc                                                                             >  1:6133692/1‑93 (MQ=255)

             tCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCt                                                                            >  2:1275578/1‑93 (MQ=255)

               cGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                                          >  1:3816122/1‑93 (MQ=255)

               cGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                                          >  2:1640522/1‑93 (MQ=255)

               cGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                                          <  2:291805/93‑1 (MQ=255)

                ggTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTcc                                                                         <  1:1430957/93‑1 (MQ=255)

                ggTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTcc                                                                         <  2:6227493/93‑1 (MQ=255)

                ggTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTcc                                                                         >  1:5113470/1‑93 (MQ=255)

                 gTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcg                                                                        <  1:29907/93‑1 (MQ=255)

                  ttCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcgg                                                                       >  2:3398399/1‑93 (MQ=255)

                   tCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcggc                                                                      >  1:2907701/1‑93 (MQ=255)

                   tCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCACACCTCTTCCGCTGCGCCTTCcggc                                                                      <  2:2327603/93‑1 (MQ=255)

                      aaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCCCCTGCCCGCACCTCTTCCGCTGCGCCTTCCggcggc                                                                   <  1:1602338/93‑1 (MQ=255)

                      aaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCggcggc                                                                   <  1:265574/93‑1 (MQ=255)

                      aaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCggcggc                                                                   >  1:1943587/1‑93 (MQ=255)

                       aCTCGGGTTTATTGGCTGCAATTGGGGCCGGATCCAGCGACGGTGCTGCGGCATCACCTTCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCt                                                                  <  1:5737924/93‑1 (MQ=255)

                          cGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCg                                                               >  1:324569/1‑93 (MQ=255)

                           ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTNCGCTGCGCCTTCCGGCGGCTGCGt                                                              >  2:2172981/1‑93 (MQ=255)

                           ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGt                                                              >  1:4408177/1‑93 (MQ=255)

                            gtgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                                             >  2:1797769/1‑93 (MQ=255)

                            gtgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                                             >  2:4890151/1‑93 (MQ=255)

                            gtgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                                             >  2:2566305/1‑93 (MQ=255)

                             tgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCg                                                            >  1:1005105/1‑93 (MQ=255)

                              gtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCgg                                                           >  1:1244036/1‑93 (MQ=255)

                                 aTTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTaa                                                        >  1:669986/1‑93 (MQ=255)

                                  ttGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAAc                                                       <  2:725116/93‑1 (MQ=255)

                                     gCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                                    <  1:367494/93‑1 (MQ=255)

                                      cTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCt                                                   <  2:5490951/93‑1 (MQ=255)

                                      cTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCt                                                   <  1:2706298/93‑1 (MQ=255)

                                       tGCAATAGTGGCCGGATCGAGCGAAGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTg                                                  <  1:1673928/93‑1 (MQ=255)

                                        gCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGCCTgg                                                 >  1:5356276/1‑93 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTggga                                               >  1:2313238/1‑92 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGt                                               <  2:3321616/93‑1 (MQ=255)

                                          aaTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGt                                               <  2:176722/93‑1 (MQ=255)

                                           aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTg                                              <  1:5620699/93‑1 (MQ=255)

                                           aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTg                                              <  2:81923/93‑1 (MQ=255)

                                            tAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTgg                                             >  1:3593508/1‑93 (MQ=255)

                                                 gCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCt                                        >  1:5894999/1‑93 (MQ=255)

                                                 gCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCt                                        <  2:6286022/93‑1 (MQ=255)

                                                  ccGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCCCCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTg                                       <  2:3518747/93‑1 (MQ=255)

                                                   cGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTgg                                      >  1:4732393/1‑93 (MQ=255)

                                                   cGGATCGAGCGACGGTGCTGCGCCATCACCTGCCCTCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTgg                                      <  2:4309999/93‑1 (MQ=255)

                                                    ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGc                                     <  1:3509024/93‑1 (MQ=255)

                                                    ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGc                                     >  2:1952492/1‑93 (MQ=255)

                                                    ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGCGGCGGCTGGc                                     >  1:4947388/1‑93 (MQ=255)

                                                    ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGCGGCGGCTGGc                                     >  2:4007909/1‑93 (MQ=255)

                                                      aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcat                                   <  1:2116357/93‑1 (MQ=255)

                                                        cGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatca                                 >  1:827492/1‑93 (MQ=255)

                                                          aGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCata                               >  2:5155340/1‑93 (MQ=255)

                                                           gCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCatat                              <  2:5253754/93‑1 (MQ=255)

                                                              gcGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  2:4080803/92‑1 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCTTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  2:3350655/93‑1 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           >  1:729973/1‑93 (MQ=255)

                                                              aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           >  2:2652219/1‑93 (MQ=255)

                                                              aCGGTGCTGCGACAGCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAg                           <  2:1098849/93‑1 (MQ=255)

                                                               cGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATGAgg                          >  2:5795268/1‑93 (MQ=255)

                                                                ggTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGc                         <  2:3972195/93‑1 (MQ=255)

                                                                 gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt                        >  1:2040906/1‑93 (MQ=255)

                                                                 gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt                        <  2:4499747/93‑1 (MQ=255)

                                                                 gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt                        <  2:3533753/93‑1 (MQ=255)

                                                                 gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt                        >  2:3141064/1‑93 (MQ=255)

                                                                    ctgcGGCATCCCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcat                     <  1:3283161/93‑1 (MQ=255)

                                                                     tgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatc                    >  1:4503336/1‑93 (MQ=255)

                                                                        ggCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACg                 >  1:411492/1‑93 (MQ=255)

                                                                        ggCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACg                 <  2:303092/93‑1 (MQ=255)

                                                                        ggCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACg                 >  2:5082667/1‑93 (MQ=255)

                                                                         gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGa                <  2:3813843/93‑1 (MQ=255)

                                                                         gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGa                <  1:3225558/93‑1 (MQ=255)

                                                                         gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGa                <  2:5193715/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               <  2:944228/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               <  1:3401441/93‑1 (MQ=255)

                                                                          cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGAt               >  1:5791114/1‑93 (MQ=255)

                                                                           aTCACCTCCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATc              <  1:6277173/93‑1 (MQ=255)

                                                                            tCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCTGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCg             >  1:444571/1‑93 (MQ=255)

                                                                             cACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGc            >  2:4530721/1‑93 (MQ=255)

                                                                              cccTTCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGcc           <  1:1260544/92‑1 (MQ=255)

                                                                              aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGAGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGcc           >  2:4708493/1‑93 (MQ=255)

                                                                               ccTGCCCGCTCCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGccc          <  2:2398808/93‑1 (MQ=255)

                                                                               ccTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGccc          <  1:995412/93‑1 (MQ=255)

                                                                                cTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCg         <  2:1431801/93‑1 (MQ=255)

                                                                                cTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCg         >  2:4398888/1‑93 (MQ=255)

                                                                                 tGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGc        <  1:6003225/93‑1 (MQ=255)

                                                                                 tGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGc        >  1:1454874/1‑93 (MQ=255)

                                                                                 tGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGc        >  2:6069433/1‑93 (MQ=255)

                                                                                 tGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGc        <  2:4483098/93‑1 (MQ=255)

                                                                                   cccGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCtt      <  2:647311/93‑1 (MQ=255)

                                                                                     cGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTc    <  1:5863739/93‑1 (MQ=255)

                                                                                      gCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCg   <  1:4536450/93‑1 (MQ=255)

                                                                                      gCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCg   >  1:927387/1‑93 (MQ=255)

                                                                                       cACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCgg  >  2:2119871/1‑93 (MQ=255)

GACCGGTGCAGGTTCCGGTTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATCACGATCGCCCGCTTTCGG  >  NC_000913/2429393‑2429572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`