BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,515,312	T→C	M181V (ATG→GTG)	b2395 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,515,312	0	T	C	100.0%	658.8 / NA	202	M181V (ATG→GTG)	b2395	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/95); total (107/95)

Only 100 of 217 total aligned reads displayed.

CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA  >  NC_000913/2515222‑2515401

ctTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgt                                                                                         >  1:3715130/1‑93 (MQ=255)

ctTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgt                                                                                         >  2:1344238/1‑93 (MQ=255)

 tttGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgtt                                                                                        >  2:1458828/1‑93 (MQ=255)

 tttGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgtt                                                                                        >  1:1463367/1‑93 (MQ=255)

    gCCCCACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTa                                                                                     <  2:6304377/93‑1 (MQ=255)

    gCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTa                                                                                     >  1:6165315/1‑93 (MQ=255)

      ccAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTaaa                                                                                   >  1:1972652/1‑93 (MQ=255)

       cAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAAt                                                                                  >  2:4561688/1‑93 (MQ=255)

        aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc                                                                                 <  2:1757810/93‑1 (MQ=255)

        aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc                                                                                 <  2:296277/93‑1 (MQ=255)

        aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc                                                                                 <  1:2595172/93‑1 (MQ=255)

        aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc                                                                                 >  2:1046019/1‑93 (MQ=255)

         acgacgGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGGGAGATAGTAGAAAAGCACGTTGTAAATCa                                                                                >  2:3175823/1‑93 (MQ=255)

              ggAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGcaca                                                                           <  2:4776215/93‑1 (MQ=255)

              ggAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGcaca                                                                           <  1:4084847/93‑1 (MQ=255)

               gAGCGATATCCCTGCGCCATAATATATGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCACCACAg                                                                          >  1:1859585/1‑93 (MQ=255)

               gAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAg                                                                          <  1:5892856/93‑1 (MQ=255)

                aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc                                                                         <  1:6001696/93‑1 (MQ=255)

                aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc                                                                         <  1:5402656/93‑1 (MQ=255)

                aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc                                                                         <  2:3305522/93‑1 (MQ=255)

                aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc                                                                         <  2:758880/93‑1 (MQ=255)

                 gCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCg                                                                        <  1:3100574/93‑1 (MQ=255)

                  cGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCgg                                                                       >  1:4391225/1‑93 (MQ=255)

                  cGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCgg                                                                       <  1:681584/93‑1 (MQ=255)

                   gATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGt                                                                      >  2:2395807/1‑93 (MQ=255)

                   gATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGt                                                                      <  1:2308223/93‑1 (MQ=255)

                    atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg                                                                     >  1:5227918/1‑93 (MQ=255)

                    atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg                                                                     >  2:3822781/1‑93 (MQ=255)

                    atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg                                                                     >  1:6287941/1‑93 (MQ=255)

                     tatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGa                                                                    >  2:497203/1‑93 (MQ=255)

                     tatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGa                                                                    >  1:4637416/1‑93 (MQ=255)

                       tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa                                                                  <  1:741178/93‑1 (MQ=255)

                       tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa                                                                  >  2:846708/1‑93 (MQ=255)

                       tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa                                                                  <  1:5162045/93‑1 (MQ=255)

                        cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa                                                                 <  1:5675553/93‑1 (MQ=255)

                        cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa                                                                 <  2:6228286/93‑1 (MQ=255)

                        cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa                                                                 <  1:1372605/93‑1 (MQ=255)

                         ccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAg                                                                >  2:151813/1‑93 (MQ=255)

                         ccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAg                                                                >  1:2540077/1‑93 (MQ=255)

                          cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaatg                                                               >  2:5383140/1‑91 (MQ=255)

                          cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAgg                                                               >  2:1313504/1‑93 (MQ=255)

                          cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAgg                                                               >  2:3243007/1‑93 (MQ=255)

                            gcgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCt                                                             <  1:3651423/93‑1 (MQ=255)

                             cgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt                                                            <  2:1211835/93‑1 (MQ=255)

                             cgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt                                                            <  2:206648/93‑1 (MQ=255)

                             cgcCACAATATCGGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGGAGAAAATCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt                                                            <  2:2156300/93‑1 (MQ=255)

                              gcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTa                                                           <  1:349886/93‑1 (MQ=255)

                               ccACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAg                                                          <  1:5657164/93‑1 (MQ=255)

                                cacaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGc                                                         >  2:4127820/1‑93 (MQ=255)

                                 acaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCa                                                        >  1:1099279/1‑93 (MQ=255)

                                 acaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCa                                                        >  1:3345132/1‑93 (MQ=255)

                                  caATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCaa                                                       >  2:4303658/1‑93 (MQ=255)

                                   aaTATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCaaa                                                      >  1:1262098/1‑93 (MQ=255)

                                    atatCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAAt                                                     >  1:3908147/1‑93 (MQ=255)

                                     tatCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATc                                                    <  2:336432/93‑1 (MQ=255)

                                       tCTGCTCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCaa                                                  >  2:5693073/1‑93 (MQ=255)

                                        cTGGGCGAAGGGGGGAGTTACAATCATGCGGGTGAAATATTAGAAAAGCACGTTTAAAATCAGAACAGCGGTGAAAAGCCTTAGCAAATCAAc                                                 <  2:4029296/93‑1 (MQ=255)

                                          gcgcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGa                                               >  1:414169/1‑93 (MQ=255)

                                           cgcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGAc                                              <  2:1547571/93‑1 (MQ=255)

                                            gcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGAcc                                             >  2:5258309/1‑93 (MQ=255)

                                              aaaGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGt                                           >  1:6038230/1‑93 (MQ=255)

                                               aaGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTg                                          >  2:2552747/1‑93 (MQ=255)

                                                   ggggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGaaaa                                      <  2:1248411/93‑1 (MQ=255)

                                                   ggggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGaaaa                                      <  1:2533408/93‑1 (MQ=255)

                                                    gggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAAt                                     >  1:4327344/1‑93 (MQ=255)

                                                     ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg                                    <  2:925405/93‑1 (MQ=255)

                                                     ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg                                    <  1:2273214/93‑1 (MQ=255)

                                                     ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg                                    <  1:4957075/93‑1 (MQ=255)

                                                      gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg                                   >  2:595029/1‑93 (MQ=255)

                                                      gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg                                   <  1:57100/93‑1 (MQ=255)

                                                      gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg                                   >  1:2031049/1‑93 (MQ=255)

                                                       aCTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGc                                  <  2:1471454/93‑1 (MQ=255)

                                                        cTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCa                                 >  2:3933439/1‑93 (MQ=255)

                                                          tACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATc                               <  1:2442405/93‑1 (MQ=255)

                                                           aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc                              >  1:866731/1‑93 (MQ=255)

                                                           aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc                              <  2:4860333/93‑1 (MQ=255)

                                                           aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc                              >  1:3746986/1‑93 (MQ=255)

                                                            cAATCATGCGAGTGAGATAGCAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCg                             >  1:924097/1‑93 (MQ=255)

                                                             aaTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGc                            >  2:1587634/1‑93 (MQ=255)

                                                             aaTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGc                            <  1:1756204/93‑1 (MQ=255)

                                                              aTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCa                           <  1:1547085/93‑1 (MQ=255)

                                                              aTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCa                           <  2:4696181/93‑1 (MQ=255)

                                                               tCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCAt                          <  2:1981614/93‑1 (MQ=255)

                                                                 aTGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCg                        >  2:1107158/1‑93 (MQ=255)

                                                                  tGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGc                       >  1:2089774/1‑93 (MQ=255)

                                                                  tGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGc                       >  2:606059/1‑93 (MQ=255)

                                                                        tGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGaaaa                 <  2:5605671/93‑1 (MQ=255)

                                                                         gagaTAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGaaaaa                <  1:5859310/93‑1 (MQ=255)

                                                                          agaTAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAg               <  1:2969359/93‑1 (MQ=255)

                                                                             tagtagAAAAGCACGTTGTAAATTAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg            <  2:2490270/93‑1 (MQ=255)

                                                                             tagtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg            >  1:4212641/1‑93 (MQ=255)

                                                                             tagtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg            >  1:5524523/1‑93 (MQ=255)

                                                                               gtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGa          <  2:3707311/93‑1 (MQ=255)

                                                                                tagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGat         <  1:3280162/93‑1 (MQ=255)

                                                                                   aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc      <  1:3162762/93‑1 (MQ=255)

                                                                                   aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc      >  2:864244/1‑93 (MQ=255)

                                                                                   aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc      >  1:1247182/1‑93 (MQ=255)

                                                                                      aGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCttt   <  1:4503676/93‑1 (MQ=255)

                                                                                       gCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTa  <  1:1839195/93‑1 (MQ=255)

                                                                                       gCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGGGGATATCtttg  >  2:3479687/1‑92 (MQ=255)

CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA  >  NC_000913/2515222‑2515401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`