BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,519,341	A→G	noncoding (69/76 nt)	lysV →	tRNA‑Lys

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,519,341	0	A	G	100.0%	381.2 / NA	151	noncoding (69/76 nt)	lysV	tRNA‑Lys
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (64/87); total (64/87)

Only 100 of 157 total aligned reads displayed.

TCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCG  >  NC_000913/2519251‑2519430

   cGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCccac                                                                                      <  1:949425/93‑1 (MQ=37)

      catcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGACCACCaa                                                                                   >  2:2843205/1‑93 (MQ=255)

       atcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGGCCACCAAt                                                                                  >  2:1602878/1‑93 (MQ=255)

       atcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAAt                                                                                  <  1:2682649/93‑1 (MQ=255)

        tcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATg                                                                                 >  2:2473414/1‑93 (MQ=255)

        tcaCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATg                                                                                 <  2:60678/93‑1 (MQ=255)

         cacccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGt                                                                                <  2:147763/93‑1 (MQ=255)

           cccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaa                                                                              >  1:3673782/1‑93 (MQ=255)

           cccaccACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaa                                                                              >  2:3871740/1‑93 (MQ=255)

            ccaccaCTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaa                                                                             <  1:1357202/93‑1 (MQ=255)

            ccaccaCTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaa                                                                             >  1:1401079/1‑93 (MQ=255)

            ccaccaCTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaa                                                                             >  1:3107199/1‑93 (MQ=255)

            ccaccaCTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaa                                                                             >  2:5830972/1‑93 (MQ=255)

            ccaccaCTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaa                                                                             >  1:2171076/1‑93 (MQ=255)

             caccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaaa                                                                            >  1:3508115/1‑93 (MQ=255)

             caccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaaa                                                                            <  1:1212057/93‑1 (MQ=255)

             caccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaaa                                                                            <  1:4515507/93‑1 (MQ=255)

               ccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaaaaa                                                                          <  1:3042407/93‑1 (MQ=255)

               ccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTaaaaaa                                                                          >  2:4047724/1‑93 (MQ=255)

                 ccTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAgc                                                                        <  1:1558934/92‑1 (MQ=21)

                 acTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAgc                                                                        >  2:5185580/1‑93 (MQ=25)

                 acTGCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAgc                                                                        <  1:1331154/93‑1 (MQ=12)

                  cTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAgcg                                                                       >  1:1573758/1‑93 (MQ=21)

                                      tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTAc                                                   <  1:5808896/93‑1 (MQ=17)

                                       ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGTCCTAAAGGCGCTTTTTTACt                                                  <  1:5894658/93‑1 (MQ=16)

                                        gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTa                                                 >  2:2146689/1‑93 (MQ=18)

                                        gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTa                                                 <  1:677486/93‑1 (MQ=18)

                                         tAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTAt                                                <  1:2799150/93‑1 (MQ=18)

                                         tAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTAt                                                <  1:2799151/93‑1 (MQ=18)

                                          agagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATc                                               <  1:3844023/93‑1 (MQ=18)

                                           gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCt                                              <  2:3725746/93‑1 (MQ=21)

                                           gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCt                                              <  2:3473855/93‑1 (MQ=21)

                                            cgCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTg                                             >  2:1525206/2‑93 (MQ=18)

                                            agCAGTTGACTTTTAATCAATTGGTGGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTg                                             <  1:1599917/93‑1 (MQ=16)

                                            agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGTCGCTTTTTTACTATCTg                                             <  1:4084279/93‑1 (MQ=255)

                                            agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTg                                             <  1:5516815/93‑1 (MQ=21)

                                              cAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCg                                           <  2:3030641/93‑1 (MQ=18)

                                               aGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGTCCACCAATGTAGAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGa                                          >  1:3084055/1‑93 (MQ=255)

                                               aGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGa                                          <  2:1667827/93‑1 (MQ=18)

                                                gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGAt                                         <  2:765731/93‑1 (MQ=21)

                                                  tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATAc                                       >  2:1143768/1‑93 (MQ=18)

                                                   gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAAGCGCGGTTTTACTATCTGCGATACt                                      >  2:1112464/1‑93 (MQ=11)

                                                     cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCa                                    <  2:358259/93‑1 (MQ=18)

                                                      ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCaa                                   >  1:2963889/1‑93 (MQ=18)

                                                       tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCaaa                                  <  2:692495/93‑1 (MQ=21)

                                                        ttAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAg                                 <  2:3090177/93‑1 (MQ=21)

                                                        ttAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAg                                 >  1:2398757/1‑93 (MQ=18)

                                                         tAATCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGa                                <  2:2462079/93‑1 (MQ=18)

                                                          aaTCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAt                               <  1:5773022/93‑1 (MQ=18)

                                                          aaTCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAt                               <  2:5428064/93‑1 (MQ=18)

                                                          aaTCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAt                               <  1:635877/93‑1 (MQ=18)

                                                          aaTCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAt                               >  1:1934245/1‑93 (MQ=18)

                                                           aTCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAtt                              <  1:3879798/93‑1 (MQ=18)

                                                              aaTTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGa                           >  1:4857403/1‑93 (MQ=18)

                                                              aaTTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGa                           >  2:4107599/1‑93 (MQ=18)

                                                               aTTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGaa                          >  1:2949310/1‑93 (MQ=18)

                                                               aTTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGaa                          >  2:5108296/1‑93 (MQ=18)

                                                               aTTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGaa                          >  2:5580177/1‑93 (MQ=18)

                                                                ttGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAc                         <  2:5942333/93‑1 (MQ=18)

                                                                ttGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAc                         <  1:1977332/93‑1 (MQ=21)

                                                                ttGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAc                         <  1:969772/93‑1 (MQ=18)

                                                                 tGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAcc                        <  2:487299/93‑1 (MQ=21)

                                                                 tGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAcc                        <  1:864261/93‑1 (MQ=21)

                                                                  ggTCGCAGGTTCGAATCCTGCACGGTCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCt                       <  1:6089228/93‑1 (MQ=16)

                                                                  ggTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGGTACTCAAAGATTCGAACCt                       <  2:6191882/93‑1 (MQ=16)

                                                                  ggTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCt                       <  1:181142/93‑1 (MQ=21)

                                                                  ggTCGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCt                       <  2:78075/93‑1 (MQ=21)

                                                                     cGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgca                    >  1:3726890/1‑93 (MQ=18)

                                                                     cGCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgca                    >  1:3508469/1‑93 (MQ=18)

                                                                      gCAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcag                   >  1:4767635/1‑93 (MQ=18)

                                                                       cAGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcagc                  <  2:4147598/93‑1 (MQ=18)

                                                                        aGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcagca                 >  1:1899716/1‑93 (MQ=18)

                                                                        aGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcagca                 <  1:6142070/93‑1 (MQ=21)

                                                                        aGGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcagca                 >  2:2088918/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  1:3209895/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  1:2145053/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  2:3841835/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  2:2277057/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  2:5603565/1‑93 (MQ=18)

                                                                         ggTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGcagcag                >  1:5921871/1‑93 (MQ=18)

                                                                          gTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg               <  1:2615845/93‑1 (MQ=18)

                                                                           ttCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGt              <  2:2414358/93‑1 (MQ=18)

                                                                           ttCGAATAATGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCGTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGt              >  2:3268993/1‑93 (MQ=11)

                                                                            tCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGtt             <  2:3214917/93‑1 (MQ=21)

                                                                            tCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGtt             <  2:4582596/93‑1 (MQ=18)

                                                                             cGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGttt            <  1:3669448/93‑1 (MQ=18)

                                                                             cGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGttt            <  1:5339951/93‑1 (MQ=18)

                                                                               aaTCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttga          <  1:4021909/93‑1 (MQ=21)

                                                                                aTCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgag         <  1:1229687/93‑1 (MQ=18)

                                                                                aTCCTCCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgag         <  2:1218007/93‑1 (MQ=16)

                                                                                 tCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagt        >  2:3919283/1‑93 (MQ=18)

                                                                                 tCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagt        <  2:1613939/93‑1 (MQ=21)

                                                                                 tCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagt        >  1:6208835/1‑93 (MQ=18)

                                                                                    tGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga     <  2:3752409/93‑1 (MQ=18)

                                                                                    tGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga     <  1:4419356/93‑1 (MQ=21)

                                                                                    tGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga     <  1:1988599/93‑1 (MQ=18)

                                                                                     gCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttgag    <  1:739710/93‑1 (MQ=18)

                                                                                     gCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttgag    <  1:3269202/93‑1 (MQ=18)

                                                                                      cACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgc   <  1:5465388/93‑1 (MQ=18)

                                                                                       aCGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGGgcg  >  1:5019120/1‑93 (MQ=16)

TCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCG  >  NC_000913/2519251‑2519430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`