BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,552,312	T→C	V297V (GTA→GTG)	yfeG ←	putative ARAC‑type regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,552,312	0	T	C	100.0%	758.5 / NA	238	V297V (GTA→GTG)	yfeG	putative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/133); total (105/133)

Only 100 of 242 total aligned reads displayed.

GGCAAATTGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGTACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGAC  >  NC_000913/2552222‑2552401

    aaTTGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCg                                                                                     >  1:1695926/1‑93 (MQ=255)

     aTTGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGt                                                                                    >  2:5712471/1‑93 (MQ=255)

     aTTGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGt                                                                                    <  1:3165003/93‑1 (MQ=255)

      ttGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGtt                                                                                   >  2:2520039/1‑93 (MQ=255)

      ttGCCCCAGACGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTTCGACCACGGACTTATCAGTTCGCGGCGCACGGCGtt                                                                                   >  2:3251547/1‑93 (MQ=255)

        gCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCa                                                                                 <  2:5171730/93‑1 (MQ=255)

        gCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCa                                                                                 <  2:1770446/93‑1 (MQ=255)

        gCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCa                                                                                 >  2:4733758/1‑93 (MQ=255)

         ccccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAg                                                                                <  2:2396906/93‑1 (MQ=255)

          cccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCATGGCGTTCAgg                                                                               <  2:1314338/93‑1 (MQ=255)

          cccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAgg                                                                               <  1:541129/93‑1 (MQ=255)

          cccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAgg                                                                               >  2:4563166/1‑93 (MQ=255)

          cccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAgg                                                                               <  1:636428/93‑1 (MQ=255)

           ccAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGc                                                                              <  1:3599867/93‑1 (MQ=255)

            cAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCg                                                                             >  2:673314/1‑93 (MQ=255)

            cAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCg                                                                             <  1:6218637/93‑1 (MQ=255)

             aGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGCCTTATACGTTCGCGGCGCCAGCCGCTCAGGCGa                                                                            >  1:330528/1‑93 (MQ=255)

             aGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGa                                                                            <  2:5395517/93‑1 (MQ=255)

              gATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGaa                                                                           <  1:5671868/93‑1 (MQ=255)

              gATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGaa                                                                           <  1:695893/93‑1 (MQ=255)

              gATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGaa                                                                           >  1:4331209/1‑93 (MQ=255)

               aTGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAAt                                                                          <  1:4754111/93‑1 (MQ=255)

                tGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATg                                                                         <  1:2735618/93‑1 (MQ=255)

                tGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATg                                                                         <  2:4815192/93‑1 (MQ=255)

                tGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATg                                                                         <  1:1788314/93‑1 (MQ=255)

                tGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATg                                                                         <  2:3626298/93‑1 (MQ=255)

                 gCCAGCATCCCCACTGCATGGCCGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGc                                                                        <  2:5112649/93‑1 (MQ=255)

                 gCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGc                                                                        <  1:646928/93‑1 (MQ=255)

                   cAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGt                                                                      <  1:2466617/93‑1 (MQ=255)

                   cAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGt                                                                      >  1:5812985/1‑93 (MQ=255)

                    aGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGtt                                                                     >  1:240885/1‑93 (MQ=255)

                      aaTCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTc                                                                   >  1:2544371/1‑93 (MQ=255)

                      aaTCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTc                                                                   <  1:52021/93‑1 (MQ=255)

                      aaTCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTc                                                                   <  1:2339833/93‑1 (MQ=255)

                       aTCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCa                                                                  >  2:3538875/1‑93 (MQ=255)

                         ccccACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGc                                                                <  1:2954337/93‑1 (MQ=255)

                          cccACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAgac                                                               <  1:413614/93‑3 (MQ=255)

                          cccACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGcc                                                               <  2:1005283/93‑1 (MQ=255)

                          cccACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGcc                                                               >  1:628799/1‑93 (MQ=255)

                           ccACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCa                                                              <  1:502472/93‑1 (MQ=255)

                            cACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCAc                                                             >  2:1215002/1‑93 (MQ=255)

                               tGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGTGTTCAGGCGAATGCGTTTCAGCCAcgcg                                                          >  2:1572660/1‑93 (MQ=255)

                                gCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGt                                                         >  2:1808245/1‑93 (MQ=255)

                                gCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGt                                                         <  1:4285245/93‑1 (MQ=255)

                                 cATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGtt                                                        <  1:167863/93‑1 (MQ=255)

                                 cATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGtt                                                        <  2:6065845/93‑1 (MQ=255)

                                      cggcgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGc                                                   >  1:5082403/1‑93 (MQ=255)

                                      cggcgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGc                                                   <  2:5340302/93‑1 (MQ=255)

                                       ggcgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGcc                                                  >  2:3933985/1‑93 (MQ=255)

                                        gcgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGTCa                                                 >  2:2676506/1‑93 (MQ=255)

                                        gcgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCa                                                 >  2:451147/1‑93 (MQ=255)

                                         cgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCaa                                                <  1:3418387/93‑1 (MQ=255)

                                         cgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCaa                                                >  1:4635022/1‑93 (MQ=255)

                                         cgTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCaa                                                <  1:6269478/93‑1 (MQ=255)

                                            cTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGc                                             <  2:732305/93‑1 (MQ=255)

                                                 aCCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTaaa                                        >  1:1235172/1‑93 (MQ=255)

                                                   cGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAAt                                      <  1:3864423/93‑1 (MQ=255)

                                                   cGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGGTCAGGCGAATGCGTTTTAGCCACGCGTTCGGGGCAATGCCTACAAt                                      >  2:2243862/1‑93 (MQ=255)

                                                    gTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATa                                     <  2:5550815/93‑1 (MQ=255)

                                                     tCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAg                                    <  2:5736359/93‑1 (MQ=255)

                                                      cATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGc                                   <  2:4113786/93‑1 (MQ=255)

                                                      cATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGc                                   >  1:6019025/1‑93 (MQ=255)

                                                      cATACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGc                                   <  2:5629658/93‑1 (MQ=255)

                                                       aTACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCg                                  <  2:4215488/93‑1 (MQ=255)

                                                       aTACTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCg                                  >  1:3943045/1‑93 (MQ=255)

                                                        ttcTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGt                                 <  1:4518717/91‑1 (MQ=255)

                                                         aCTTTGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTg                                <  1:883555/93‑1 (MQ=255)

                                                           tttGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGaa                              >  1:1657574/1‑93 (MQ=255)

                                                           tttGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGaa                              >  1:3721494/1‑93 (MQ=255)

                                                            ttGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGaaa                             <  2:2902295/93‑1 (MQ=255)

                                                            ttGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGaaa                             <  1:2195166/93‑1 (MQ=255)

                                                            ttGCGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGaaa                             <  2:5831244/93‑1 (MQ=255)

                                                               cGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAAcgc                          <  2:5088264/93‑1 (MQ=255)

                                                               cGACCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAAcgc                          <  1:1031809/93‑1 (MQ=255)

                                                                 aCCACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGt                        >  1:2166939/1‑93 (MQ=255)

                                                                  ccACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGtt                       <  2:4056833/93‑1 (MQ=255)

                                                                  ccACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGtt                       <  1:4629173/93‑1 (MQ=255)

                                                                  ccACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGtt                       <  2:1895786/93‑1 (MQ=255)

                                                                   cACGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGttt                      >  1:4000417/1‑93 (MQ=255)

                                                                    aCGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGtttt                     <  2:3070603/93‑1 (MQ=255)

                                                                    aCGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGtttt                     <  2:4442122/93‑1 (MQ=255)

                                                                     cGGACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTg                    <  1:1169329/93‑1 (MQ=255)

                                                                      ggACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGt                   >  2:3836909/1‑93 (MQ=255)

                                                                      ggACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGt                   <  1:2096251/93‑1 (MQ=255)

                                                                      ggACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGt                   <  2:2279129/93‑1 (MQ=255)

                                                                       gACTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTa                  <  1:1360418/93‑1 (MQ=255)

                                                                        aCTTATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAg                 <  2:4271568/93‑1 (MQ=255)

                                                                          ttATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCg               >  1:2702458/1‑93 (MQ=255)

                                                                          ttATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCg               >  2:1989372/1‑93 (MQ=255)

                                                                           tATCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGt              <  2:6112882/93‑1 (MQ=255)

                                                                             tCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgc            >  2:3317043/1‑93 (MQ=255)

                                                                             tCAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgc            <  1:1450366/93‑1 (MQ=255)

                                                                              cAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgcg           >  2:2581123/1‑93 (MQ=255)

                                                                              cAGTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgcg           <  1:2245107/93‑1 (MQ=255)

                                                                                gTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgcggc         <  1:2835594/93‑1 (MQ=255)

                                                                                gTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgcggc         <  1:58838/93‑1 (MQ=255)

                                                                                gTTCGCGGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTgcggc         <  1:1725374/93‑1 (MQ=255)

                                                                                   cgcgGCGCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCggcggc      >  2:3948922/1‑93 (MQ=255)

                                                                                    gcggcgCACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCt     <  1:758598/93‑1 (MQ=255)

                                                                                       gcgcACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGAc  <  1:4923231/93‑1 (MQ=255)

GGCAAATTGCCCCAGATGCCAGAATCCCCACTGCATGGCGGCGTCTTTTACCGTCATACTTTGCGACCACGGACTTATCAGTTCGCGGCGTACGGCGTTCAGGCGAATGCGTTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGAC  >  NC_000913/2552222‑2552401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`