BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	298,742	A→G	Y473H (TAC→CAC)	yagR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	298,742	0	A	G	100.0%	745.8 / NA	231	Y473H (TAC→CAC)	yagR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/113); total (118/113)

Only 100 of 240 total aligned reads displayed.

AAACCGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTAGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCCAGCA  >  NC_000913/298652‑298831

aaaCCGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGc                                                                                         <  2:1783831/93‑1 (MQ=255)

 aaCCGGGAAACTAGAATCGCCGAGGTGAACCGCAGCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCt                                                                                        <  2:2785783/93‑1 (MQ=255)

  aCCGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTg                                                                                       <  1:4232955/93‑1 (MQ=255)

  aCCGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTg                                                                                       <  2:430032/93‑1 (MQ=255)

   ccGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGc                                                                                      >  2:5624799/1‑93 (MQ=255)

     gggAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCg                                                                                    <  1:5964898/93‑1 (MQ=255)

     gggAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCg                                                                                    >  2:2406228/1‑93 (MQ=255)

      ggAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGCATGGTGTGGCTGCCgg                                                                                   >  2:5640908/1‑93 (MQ=255)

       gAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGt                                                                                  <  1:651265/93‑1 (MQ=255)

        aaaCTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTg                                                                                 <  2:5871328/93‑1 (MQ=255)

         aaCTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGc                                                                                >  1:1952488/1‑93 (MQ=255)

          aCTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGcc                                                                               >  1:5728178/1‑93 (MQ=255)

           cTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCa                                                                              <  1:23103/93‑1 (MQ=255)

            tGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCaa                                                                             <  1:4529783/93‑1 (MQ=255)

            tGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCaa                                                                             <  2:4652434/93‑1 (MQ=255)

             ggAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAAt                                                                            >  1:2079328/1‑93 (MQ=255)

             ggAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAAt                                                                            <  1:1181739/93‑1 (MQ=255)

             ggAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAAt                                                                            >  1:3060699/1‑93 (MQ=255)

             ggAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAAt                                                                            <  2:4868950/93‑1 (MQ=255)

              gAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATg                                                                           <  1:3615984/93‑1 (MQ=255)

               aaTCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGt                                                                          <  1:366710/93‑1 (MQ=255)

               aaTCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGt                                                                          <  2:4175173/93‑1 (MQ=255)

                aTCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTc                                                                         >  1:2482728/1‑93 (MQ=255)

                 tCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCg                                                                        <  1:2613156/93‑1 (MQ=255)

                 tCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCg                                                                        >  2:659479/1‑93 (MQ=255)

                     cGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCa                                                                    <  2:5229423/93‑1 (MQ=255)

                     cGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCa                                                                    >  2:4053854/1‑93 (MQ=255)

                       aGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATg                                                                  <  1:3431260/93‑1 (MQ=255)

                        ggTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGt                                                                 <  1:2963946/93‑1 (MQ=255)

                        ggTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGt                                                                 <  2:2151340/93‑1 (MQ=255)

                        ggTGAACCGCAACCTGCTCCAGCGGCACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGTCGGTGCCAATGTCGGTCATGt                                                                 >  2:3040765/1‑93 (MQ=255)

                        ggTGAACCGCAACCTGCTCAAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGt                                                                 >  2:6134381/1‑93 (MQ=255)

                            aaCCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGt                                                             <  1:2246355/93‑1 (MQ=255)

                             aCCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGtt                                                            <  1:2850112/93‑1 (MQ=255)

                               cGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGATGCCAATGTCGGTCATGTCCGTTTc                                                          >  1:6086244/1‑93 (MQ=255)

                                gCAACCTGCTCCAGCGGTACGCCAAGCATTTCCACTGCCGTCTGGGCCAGCATGGTGTGGCTGACGGTGCCAATGTCGGCCATGTCCGTTTCt                                                         >  2:960793/1‑93 (MQ=255)

                                  agccTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTAc                                                       <  2:1542253/91‑1 (MQ=255)

                                  aaCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTAc                                                       >  1:5560909/1‑93 (MQ=255)

                                  aaCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTAc                                                       <  1:3298912/93‑1 (MQ=255)

                                  aaCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGGTTCTAc                                                       >  2:3450229/1‑93 (MQ=255)

                                   aCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACg                                                      <  1:2374329/93‑1 (MQ=255)

                                   aCCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACg                                                      >  1:3512445/1‑93 (MQ=255)

                                    ccTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACgg                                                     <  2:469650/93‑1 (MQ=255)

                                     cTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGt                                                    <  1:6026193/93‑1 (MQ=255)

                                      tGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTa                                                   >  1:4771347/1‑93 (MQ=255)

                                      tGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTa                                                   >  1:2025656/1‑93 (MQ=255)

                                         tCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACg                                                >  1:5917665/1‑93 (MQ=255)

                                          ccAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACgg                                               >  2:3925/1‑93 (MQ=255)

                                          ccAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACgg                                               <  2:1067628/93‑1 (MQ=255)

                                            aGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTg                                             >  1:3160969/1‑93 (MQ=255)

                                            aGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTg                                             <  2:3992901/93‑1 (MQ=255)

                                            aGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTg                                             <  2:2585262/93‑1 (MQ=255)

                                             gCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGc                                            >  2:4994551/1‑93 (MQ=255)

                                             gCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGc                                            <  1:2226170/93‑1 (MQ=255)

                                              cGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGcc                                           <  1:4485501/93‑1 (MQ=255)

                                               ggTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACCGTGCCg                                          >  2:2976497/1‑93 (MQ=255)

                                                gTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGt                                         <  2:19126/93‑1 (MQ=255)

                                                 tACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGtt                                        <  2:3661535/93‑1 (MQ=255)

                                                     ccAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGt                                    >  2:3725753/1‑93 (MQ=255)

                                                      cAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGtt                                   <  1:3946015/93‑1 (MQ=255)

                                                      cAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGGTTCTACGGTAAGGGTGCCGTTTTGtt                                   >  1:920175/1‑93 (MQ=255)

                                                      cAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGAGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGtt                                   >  1:4089077/1‑93 (MQ=255)

                                                       aaGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTc                                  >  1:2672426/1‑93 (MQ=255)

                                                       aaGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTc                                  >  1:6139426/1‑93 (MQ=255)

                                                       aaGCATTTCCGCTGCCGCCTGGGCCAGAATGGTGTGGATGCCGGTGCCCATGTCGGTCATGTCCGTTTCTACGGTAATGGTGCCGTTTTGTTc                                  >  2:423393/1‑93 (MQ=255)

                                                        aGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCg                                 >  2:1632764/1‑93 (MQ=255)

                                                         gCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGa                                <  2:3235605/93‑1 (MQ=255)

                                                         gCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACCGTGCCGTTTTGTTCGa                                >  1:694036/1‑93 (MQ=255)

                                                          cATTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAg                               <  1:1482368/93‑1 (MQ=255)

                                                           aTTTCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAgg                              >  2:4644263/1‑93 (MQ=255)

                                                            tttCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGt                             >  2:4221704/1‑93 (MQ=255)

                                                            tttCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGt                             <  1:1803331/93‑1 (MQ=255)

                                                            tttCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGt                             <  2:730838/93‑1 (MQ=255)

                                                             ttCCGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTg                            <  2:3626833/93‑1 (MQ=255)

                                                               ccGCTGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGaa                          <  2:918735/93‑1 (MQ=255)

                                                                   tGCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCg                      >  2:1407719/1‑93 (MQ=255)

                                                                    gCCGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGa                     >  2:3107924/1‑93 (MQ=255)

                                                                      cGTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGc                   <  1:883118/93‑1 (MQ=255)

                                                                       gTCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCa                  <  2:5038086/93‑1 (MQ=255)

                                                                        tCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAc                 >  2:376550/1‑93 (MQ=255)

                                                                        tCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAc                 >  2:1350254/1‑93 (MQ=255)

                                                                        tCTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAc                 >  1:101285/1‑93 (MQ=255)

                                                                         cTGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAcc                <  1:5016260/93‑1 (MQ=255)

                                                                          tGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAccc               <  1:823718/93‑1 (MQ=255)

                                                                          tGGGCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCAccc               <  2:5448854/93‑1 (MQ=255)

                                                                           gggCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCg              <  2:3313791/93‑1 (MQ=255)

                                                                           gggCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCg              >  2:3440298/1‑93 (MQ=255)

                                                                           gggCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCg              <  2:5105390/93‑1 (MQ=255)

                                                                             gCCAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAt            >  2:4820249/1‑93 (MQ=255)

                                                                              ccAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAtt           <  2:2016279/93‑1 (MQ=255)

                                                                               cAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAttt          <  2:4087185/93‑1 (MQ=255)

                                                                               cAGAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAttt          >  1:4365067/1‑93 (MQ=255)

                                                                                 gAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAttttt        >  1:471506/1‑93 (MQ=255)

                                                                                 gAATGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGAttttt        >  2:6205259/1‑93 (MQ=255)

                                                                                  aaTGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTc       <  1:1734755/93‑1 (MQ=255)

                                                                                   aTGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTcc      <  1:1417689/93‑1 (MQ=255)

                                                                                    tGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCca     >  2:606157/1‑93 (MQ=255)

                                                                                    tGGTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCca     >  1:2084086/1‑93 (MQ=255)

                                                                                     ggTGTGGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCcag    >  2:4454232/1‑93 (MQ=255)

                                                                                       tgtgGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCcagca  <  1:1117686/93‑1 (MQ=255)

AAACCGGGAAACTGGAATCGCCGAGGTGAACCGCAACCTGCTCCAGCGGTACGCCAAGCATTTCCGCTGCCGTCTGGGCCAGAATGGTGTAGCTGCCGGTGCCAATGTCGGTCATGTCCGTTTCTACGGTAACGGTGCCGTTTTGTTCGAGGTGAACCCGAGCACCCGATTTTTCCAGCA  >  NC_000913/298652‑298831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`