BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,613,076	T→C	T276A (ACT→GCT)	perM ←	putative permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,613,076	0	T	C	100.0%	684.7 / NA	208	T276A (ACT→GCT)	perM	putative permease
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/110); total (98/110)

Only 100 of 210 total aligned reads displayed.

TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGA  >  NC_000913/2612986‑2613165

tAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAc                                                                                         <  2:5390382/93‑1 (MQ=255)

tAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAc                                                                                         <  1:26203/93‑1 (MQ=255)

 aaCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAcc                                                                                        >  2:5721699/1‑93 (MQ=255)

 aaCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCAcc                                                                                        >  2:5492759/1‑93 (MQ=255)

  aCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCt                                                                                       >  1:1526655/1‑93 (MQ=255)

  aCCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCt                                                                                       <  2:4630825/93‑1 (MQ=255)

    cGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgc                                                                                     <  2:2414223/93‑1 (MQ=255)

    cGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgc                                                                                     >  1:3123005/1‑93 (MQ=255)

     gCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcg                                                                                    <  2:4924364/93‑1 (MQ=255)

     gCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcg                                                                                    >  2:1397168/1‑93 (MQ=255)

      cTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTgcgc                                                                                   <  1:1278788/93‑1 (MQ=255)

       ttCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGcc                                                                                  <  1:6037271/93‑1 (MQ=255)

          ggAGAACAACACCGGCACTAACAGGTTGCCGTCCAACGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCaaa                                                                               >  2:5322083/1‑93 (MQ=255)

          ggAGAACAACACCCGCACTGCCAGGTTGCCGTCCAGCGCCTGCATAATCAGATACACCGCGAAGCAGCTCCAGCATTCAGCCCCTGCGCCaac                                                                               >  2:2390464/1‑92 (MQ=255)

           gagaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAc                                                                              >  1:1120913/1‑93 (MQ=255)

           gagaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAAc                                                                              >  2:2361466/1‑93 (MQ=255)

            agaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACt                                                                             >  1:4838171/1‑93 (MQ=255)

             gaACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTg                                                                            >  2:6296460/1‑93 (MQ=255)

               acaacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGa                                                                          >  1:6124477/1‑93 (MQ=255)

                 aacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAAt                                                                        <  2:1722101/93‑1 (MQ=255)

                 aacaCCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAAt                                                                        <  1:3986152/93‑1 (MQ=255)

                    cccGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAgc                                                                     <  2:4153770/92‑1 (MQ=255)

                     ccGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAgag                                                                    >  1:4614091/1‑91 (MQ=255)

                        gCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgcca                                                                 >  1:3191775/1‑93 (MQ=255)

                        gCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgcca                                                                 <  2:1770472/93‑1 (MQ=255)

                         cACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccac                                                                <  2:892413/93‑1 (MQ=255)

                         cACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccac                                                                >  2:1844990/1‑93 (MQ=255)

                            tAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGcgccacgcc                                                             >  1:140520/1‑93 (MQ=255)

                              aCAGTTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCaa                                                           >  2:1683369/1‑93 (MQ=255)

                               cAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAac                                                          <  1:1061918/93‑1 (MQ=255)

                                 ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca                                                        >  2:4492744/1‑93 (MQ=255)

                                 ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca                                                        >  2:1070858/1‑93 (MQ=255)

                                 ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca                                                        <  1:2668563/93‑1 (MQ=255)

                                 ggTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAacca                                                        >  1:5177605/1‑93 (MQ=255)

                                  gTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccac                                                       >  2:2957390/1‑93 (MQ=255)

                                  gTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccac                                                       <  2:3164289/93‑1 (MQ=255)

                                   ttGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccacc                                                      <  2:708198/93‑1 (MQ=255)

                                   ttGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAaccacc                                                      <  1:5725542/93‑1 (MQ=255)

                                     gCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCgg                                                    >  1:4973218/1‑93 (MQ=255)

                                      ccGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGa                                                   <  1:5584834/93‑1 (MQ=255)

                                      ccGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGa                                                   >  1:2444578/1‑93 (MQ=255)

                                       cGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGaa                                                  >  2:2004684/1‑93 (MQ=255)

                                        gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt                                                 >  1:2112299/1‑93 (MQ=255)

                                        gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt                                                 >  1:166510/1‑93 (MQ=255)

                                        gTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAAt                                                 >  1:1812786/1‑93 (MQ=255)

                                         tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg                                                <  2:2583578/93‑1 (MQ=255)

                                         tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg                                                >  2:3130440/1‑93 (MQ=255)

                                         tCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATg                                                <  2:4789218/93‑1 (MQ=255)

                                           cAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGt                                              <  2:4873545/93‑1 (MQ=255)

                                           cAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGt                                              <  1:119081/93‑1 (MQ=255)

                                            aGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTc                                             <  1:2263229/93‑1 (MQ=255)

                                              cgcCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTcac                                           <  2:2046919/93‑1 (MQ=255)

                                               gcCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAATCTGGAATAGCGCCACGCCAACCACCGGAATGGTcacc                                          <  2:4286273/93‑1 (MQ=255)

                                                  tGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACcaca                                       >  1:848285/1‑93 (MQ=255)

                                                  tGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACcaca                                       >  1:349373/1‑93 (MQ=255)

                                                    aataatCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACaaa                                     <  2:5143040/93‑1 (MQ=255)

                                                       aatCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgc                                  <  2:5060911/93‑1 (MQ=255)

                                                        atCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcg                                 >  2:1243677/1‑93 (MQ=255)

                                                         tCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcgc                                >  2:359627/1‑93 (MQ=255)

                                                         tCAGATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATgcgc                                >  2:5996966/1‑93 (MQ=255)

                                                            gATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCaa                             >  1:2814255/1‑93 (MQ=255)

                                                            gATACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCaa                             >  1:2221363/1‑93 (MQ=255)

                                                             aTACACCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAAt                            <  1:4449736/93‑1 (MQ=255)

                                                               acacCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCAGGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGt                          >  1:4174037/1‑93 (MQ=255)

                                                               acacCGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGt                          <  1:5848202/93‑1 (MQ=255)

                                                                  ccGCGAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACg                       >  2:1948968/1‑93 (MQ=255)

                                                                    gcgAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGa                     <  2:515430/93‑1 (MQ=255)

                                                                    gcgAAGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGa                     >  2:3552445/1‑93 (MQ=255)

                                                                       aaGCAGCTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATa                  >  1:4229228/1‑93 (MQ=255)

                                                                        agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACACATGCGCCAATGTACGGAATaa                 >  2:3914989/1‑93 (MQ=255)

                                                                        agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATaa                 <  1:2017602/93‑1 (MQ=255)

                                                                        agcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATaa                 <  1:5343547/93‑1 (MQ=255)

                                                                         gcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAg                >  2:3214406/1‑93 (MQ=255)

                                                                         gcagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAg                <  1:4482617/93‑1 (MQ=255)

                                                                          cagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGa               <  1:974498/93‑1 (MQ=255)

                                                                          cagcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGa               <  2:2281275/93‑1 (MQ=255)

                                                                           agcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGaa              >  1:5121469/1‑93 (MQ=255)

                                                                           agcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGaa              >  1:3661766/1‑93 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCTCGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             <  2:2805452/93‑1 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             <  2:3157804/93‑1 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             >  2:5196656/1‑93 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             >  1:380618/1‑93 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             >  1:5302882/1‑93 (MQ=255)

                                                                            gcTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAc             <  1:3348234/93‑1 (MQ=255)

                                                                             cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc            <  2:5572224/93‑1 (MQ=255)

                                                                             cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc            <  2:5410392/93‑1 (MQ=255)

                                                                             cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc            <  2:1472919/93‑1 (MQ=255)

                                                                             cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc            <  2:1625433/93‑1 (MQ=255)

                                                                             cTCCAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAAcc            <  2:3395349/93‑1 (MQ=255)

                                                                               ccAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCga          >  1:5001386/1‑93 (MQ=255)

                                                                                cAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgag         >  1:1990681/1‑93 (MQ=255)

                                                                                cAGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgag         <  2:5653078/93‑1 (MQ=255)

                                                                                 aGAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCgaga        <  2:5890276/93‑1 (MQ=255)

                                                                                  gAATTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGaa       <  1:4907811/93‑1 (MQ=255)

                                                                                   aaTTCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAg      >  1:3508012/1‑93 (MQ=255)

                                                                                   aaTTCAGCACCTGCGCCAAACTGGAATAGCCCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAg      >  2:1729323/1‑93 (MQ=255)

                                                                                     ttCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGcc    <  1:47728/93‑1 (MQ=255)

                                                                                      tCAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCg   <  1:5402504/93‑1 (MQ=255)

                                                                                       cAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGa  <  2:1003310/93‑1 (MQ=255)

                                                                                       cAGCACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGa  <  2:407250/93‑1 (MQ=255)

TAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACACCGCGAAGCAGCTCCAGAATTCAGTACCTGCGCCAAACTGGAATAGCGCCACGCCAACCACCGGAATGGTCACCACAAATGCGCCAATGTACGGAATAAGAACCGAGAAGCCGA  >  NC_000913/2612986‑2613165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`