BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	301,875	A→G	intergenic (‑78/‑340)	yagT ← / → yagU	putative xanthine dehydrogenase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	301,875	0	A	G	100.0%	710.2 / NA	218	intergenic (‑78/‑340)	yagT/yagU	putative xanthine dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/113); total (105/113)

Only 100 of 220 total aligned reads displayed.

CTTGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATAGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTTGATGATG  >  NC_000913/301785‑301964

cTTGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGt                                                                                         <  2:5181271/93‑1 (MQ=255)

 ttGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTc                                                                                        >  1:3441305/1‑93 (MQ=255)

 ttGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTc                                                                                        >  2:2484708/1‑93 (MQ=255)

  tGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCg                                                                                       <  1:3700151/93‑1 (MQ=255)

   ggTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCgg                                                                                      <  1:2743113/93‑1 (MQ=255)

     ttGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCg                                                                                    >  1:6090714/1‑93 (MQ=255)

     tcgCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCg                                                                                    <  2:3007765/91‑1 (MQ=255)

        cTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAca                                                                                 <  2:2619253/93‑1 (MQ=255)

         tCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGCGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAcag                                                                                >  1:4218857/1‑93 (MQ=255)

         tCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAcag                                                                                >  2:5129917/1‑93 (MQ=255)

         tCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAcag                                                                                <  2:1408978/93‑1 (MQ=255)

          cATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAcagc                                                                               >  2:2769130/1‑93 (MQ=255)

           aTACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGAcagca                                                                              <  1:116058/93‑1 (MQ=255)

             aCCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagg                                                                            <  1:2479356/93‑1 (MQ=255)

             aCCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagg                                                                            <  1:1737939/93‑1 (MQ=255)

             aCCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagg                                                                            >  1:5476893/1‑93 (MQ=255)

             aCCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagg                                                                            >  2:4417317/1‑93 (MQ=255)

             aCCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagg                                                                            >  1:5067534/1‑93 (MQ=255)

              ccAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCagga                                                                           <  2:1055301/93‑1 (MQ=255)

               cAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCaggag                                                                          <  2:1151506/93‑1 (MQ=255)

               cAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCaggag                                                                          >  1:5212016/1‑93 (MQ=255)

                aGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCaggagg                                                                         <  1:4184452/93‑1 (MQ=255)

                 ggCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAggagga                                                                        <  2:2804619/93‑1 (MQ=255)

                  gCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGat                                                                       >  2:1899763/1‑93 (MQ=255)

                  gCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGat                                                                       <  2:783928/93‑1 (MQ=255)

                  gCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGat                                                                       >  1:1554684/1‑93 (MQ=255)

                     tCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGattat                                                                    >  2:2062591/1‑93 (MQ=255)

                     tCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGattat                                                                    >  1:5712996/1‑93 (MQ=255)

                     tCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGattat                                                                    >  2:4133608/1‑93 (MQ=255)

                       cGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTc                                                                  <  1:329609/93‑1 (MQ=255)

                        ggTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCt                                                                 <  2:3520592/93‑1 (MQ=255)

                         gTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCtt                                                                >  1:719867/1‑93 (MQ=255)

                         gTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCtt                                                                >  2:288544/1‑93 (MQ=255)

                          tATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTa                                                               >  2:2433759/1‑93 (MQ=255)

                           aTTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaa                                                              >  2:4445841/1‑93 (MQ=255)

                           aTTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaa                                                              <  1:1341366/93‑1 (MQ=255)

                            ttCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaaa                                                             >  1:3148525/1‑93 (MQ=255)

                             tCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaaaa                                                            <  2:4687762/93‑1 (MQ=255)

                             tCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaaaa                                                            <  2:2338978/93‑1 (MQ=255)

                             tCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaaaa                                                            <  2:5938872/93‑1 (MQ=255)

                             tCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTaaaa                                                            >  1:2224788/1‑93 (MQ=255)

                             tCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTAATCTTaaaa                                                            <  2:6164561/93‑1 (MQ=255)

                               tAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAAcg                                                          >  1:5892127/1‑93 (MQ=255)

                               tAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAAcg                                                          >  1:6127506/1‑93 (MQ=255)

                                    gggAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAAt                                                     >  2:1489597/1‑93 (MQ=255)

                                     ggAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATg                                                    <  1:3442454/93‑1 (MQ=255)

                                     ggAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATg                                                    <  2:6208121/93‑1 (MQ=255)

                                     ggAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATg                                                    >  2:5621541/1‑93 (MQ=255)

                                         aaTAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGc                                                <  1:4709082/93‑1 (MQ=255)

                                         aaTAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGc                                                >  1:4410032/1‑93 (MQ=255)

                                          aTAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCt                                               >  1:1025818/1‑93 (MQ=255)

                                           tAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTa                                              >  2:5676361/1‑93 (MQ=255)

                                              gagTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTATGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGa                                           <  1:1284249/93‑1 (MQ=255)

                                                gTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGc                                         <  1:5083901/93‑1 (MQ=255)

                                                 tGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGcc                                        <  1:4577140/93‑1 (MQ=255)

                                                   cGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCg                                      <  1:5627137/93‑1 (MQ=255)

                                                    gTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCgg                                     >  1:976655/1‑93 (MQ=255)

                                                     ttGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGc                                    <  1:3541293/93‑1 (MQ=255)

                                                     ttGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGc                                    >  2:3182801/1‑93 (MQ=255)

                                                         gagaGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaat                                >  2:5548719/1‑93 (MQ=255)

                                                         gagaGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaat                                <  2:4024663/93‑1 (MQ=255)

                                                         gagaGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaat                                >  2:3607334/1‑93 (MQ=255)

                                                         gagaGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaat                                >  2:339914/1‑93 (MQ=255)

                                                         gagaGTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaat                                >  1:2105939/1‑93 (MQ=255)

                                                          agagTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaata                               >  2:5783306/1‑93 (MQ=255)

                                                           gagTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCtaataa                              >  2:1763365/1‑93 (MQ=255)

                                                             gTGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAAt                            >  2:2489119/1‑93 (MQ=255)

                                                              tGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAAtt                           <  2:1646769/93‑1 (MQ=255)

                                                              tGCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAAtt                           <  1:2594771/93‑1 (MQ=255)

                                                               gCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTc                          <  2:751340/93‑1 (MQ=255)

                                                               gCTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTc                          >  1:1888236/1‑93 (MQ=255)

                                                                cTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCa                         >  2:2729204/1‑93 (MQ=255)

                                                                cTGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCa                         <  2:3983637/93‑1 (MQ=255)

                                                                 tGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCAt                        >  2:4091138/1‑93 (MQ=255)

                                                                 tGATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCAt                        >  1:537073/1‑93 (MQ=255)

                                                                  gATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATg                       >  1:4381610/1‑93 (MQ=255)

                                                                  gATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATg                       <  1:6238198/93‑1 (MQ=255)

                                                                  gATGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATg                       >  1:6056477/1‑93 (MQ=255)

                                                                    tGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGtt                     <  1:3051782/93‑1 (MQ=255)

                                                                    tGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGtt                     <  2:1460233/93‑1 (MQ=255)

                                                                    tGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGtt                     >  1:3746108/1‑93 (MQ=255)

                                                                    tGCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGtt                     <  1:5973852/93‑1 (MQ=255)

                                                                     gCTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTc                    >  2:3841059/1‑93 (MQ=255)

                                                                      cTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCg                   <  2:1940580/93‑1 (MQ=255)

                                                                      cTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCg                   <  2:1222027/93‑1 (MQ=255)

                                                                      cTTTTTTAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCg                   >  2:5899716/1‑93 (MQ=255)

                                                                       ttttttAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGc                  >  1:2935938/1‑93 (MQ=255)

                                                                       ttttttAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTAGc                  >  2:4860590/1‑93 (MQ=255)

                                                                            tAAACGTTAAGCATTGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATTAGCCCGGCTAATAAATTCATGTTCGCCGGGa             <  1:2968423/93‑1 (MQ=255)

                                                                            tAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGa             <  2:4396094/93‑1 (MQ=255)

                                                                            tAAACGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGa             <  1:409305/93‑1 (MQ=255)

                                                                             aaaCGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGAt            <  2:5057458/93‑1 (MQ=255)

                                                                                cGTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGtt         <  2:1300353/93‑1 (MQ=255)

                                                                                agTTAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGtt         <  1:2758427/92‑1 (MQ=255)

                                                                                   tAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgat      <  2:4561696/93‑1 (MQ=255)

                                                                                   tAAGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgat      <  1:5459212/93‑1 (MQ=255)

                                                                                     aGCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgatga    <  2:4636247/93‑1 (MQ=255)

                                                                                      gCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgatgat   <  2:3715098/93‑1 (MQ=255)

                                                                                      gCATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgatgat   >  1:481873/1‑93 (MQ=255)

                                                                                       cATGGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTtgatgatg  >  1:3893556/1‑93 (MQ=255)

CTTGGTTGCTCATACCAGGCCTCCGGTATTCTAAAGGGGAAAATAAGAGTGCGTTGCGAGAGTGCTGATGCTTTTTTAAACGTTAAGCATAGTCGGCGACAGCAGGAGGATTATTCTTAAAACGCGAATGCAGCTATGAGCCCGGCTAATAAATTCATGTTCGCCGGGATGTTGATGATG  >  NC_000913/301785‑301964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`