BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,674,176	T→C	I224V (ATT→GTT)	yphD ←	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,674,176	0	T	C	100.0%	538.3 / NA	168	I224V (ATT→GTT)	yphD	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (87/81); total (87/81)

Only 100 of 176 total aligned reads displayed.

TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGC  >  NC_000913/2674086‑2674265

ttGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACgc                                                                                         <  1:1754706/93‑1 (MQ=255)

ttGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACgc                                                                                         <  1:4512952/93‑1 (MQ=255)

   cgccACCTGCGTTACCAGAACCGAGGCGCGCCACCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCa                                                                                      <  2:665137/90‑1 (MQ=255)

     gCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAcc                                                                                    >  1:5914459/1‑93 (MQ=255)

      cACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAccc                                                                                   <  1:4820943/93‑1 (MQ=255)

      cACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAccc                                                                                   <  1:4151966/93‑1 (MQ=255)

        ccTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcga                                                                                 <  2:1340787/93‑1 (MQ=255)

        ccTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcga                                                                                 >  2:763944/1‑93 (MQ=255)

         cTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgac                                                                                <  1:5712844/93‑1 (MQ=255)

         cTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgac                                                                                >  1:4318421/1‑93 (MQ=255)

           gCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgacga                                                                              >  1:1376965/1‑93 (MQ=255)

            cGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGaa                                                                             <  2:4295804/93‑1 (MQ=255)

              ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg                                                                           >  1:4818273/1‑93 (MQ=255)

              ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg                                                                           >  2:929768/1‑93 (MQ=255)

              ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg                                                                           >  2:4202125/1‑93 (MQ=255)

                  cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa                                                                       <  2:3363494/93‑1 (MQ=255)

                  cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa                                                                       <  1:5129730/93‑1 (MQ=255)

                  cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa                                                                       <  2:119158/93‑1 (MQ=255)

                   aGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAACCGACGAACGTTGAt                                                                      >  1:713335/1‑93 (MQ=255)

                    gAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATg                                                                     >  1:3899291/1‑93 (MQ=255)

                        cGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGc                                                                 >  2:5865367/1‑93 (MQ=255)

                          aGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGcac                                                               >  2:4573006/1‑93 (MQ=255)

                          aGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGcaa                                                               >  2:373365/1‑92 (MQ=255)

                             cgcgcCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAAc                                                            <  1:6291601/93‑1 (MQ=255)

                             cgcgcCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAAc                                                            <  1:5409945/93‑1 (MQ=255)

                               cgccgcCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTg                                                          >  1:2601316/1‑93 (MQ=255)

                                gccgccAACAAAATGCCGGTCCCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgc                                                         <  2:602549/93‑1 (MQ=255)

                                 ccgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcg                                                        >  2:2840639/1‑93 (MQ=255)

                                 ccgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcc                                                        >  1:5974216/1‑92 (MQ=255)

                                  cgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcgc                                                       >  1:1244350/1‑93 (MQ=255)

                                  cgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGAGCACCCGACGAACGTTGATGCCGCACAACTgcgc                                                       >  2:2166677/1‑93 (MQ=255)

                                   gccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGcgcc                                                      >  1:67969/1‑93 (MQ=255)

                                   gccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGcgcc                                                      >  1:2513473/1‑93 (MQ=255)

                                      aacaaAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCgccgcc                                                   >  1:5496076/1‑93 (MQ=255)

                                       acaaAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGccgccg                                                  >  2:6166655/1‑93 (MQ=255)

                                          aaaTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAg                                               >  2:1122781/1‑93 (MQ=255)

                                           aaTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGc                                              >  1:5417613/1‑93 (MQ=255)

                                            aTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCa                                             <  2:2821939/93‑1 (MQ=255)

                                              gCCGGCCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCAtt                                           <  2:3332002/93‑1 (MQ=255)

                                               ccGGTCACCGCCGATAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTa                                          <  2:2553033/93‑1 (MQ=255)

                                                cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         <  1:4757476/93‑1 (MQ=255)

                                                cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         <  2:375199/93‑1 (MQ=255)

                                                cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         <  2:5260859/93‑1 (MQ=255)

                                                cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         <  1:1765211/93‑1 (MQ=255)

                                                cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         >  1:141348/1‑93 (MQ=255)

                                                cGGTCACCGCCCCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc                                         <  2:1980999/93‑1 (MQ=255)

                                                 ggTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAcc                                        >  1:1437589/1‑93 (MQ=255)

                                                  gTCCCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCg                                       <  2:3567716/93‑1 (MQ=255)

                                                    cACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGcc                                     >  2:1433166/1‑93 (MQ=255)

                                                    cACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGcc                                     >  2:58975/1‑93 (MQ=255)

                                                     aCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCa                                    >  2:4457129/1‑93 (MQ=255)

                                                     aCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCa                                    >  1:1029659/1‑93 (MQ=255)

                                                      ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa                                   >  2:3468495/1‑93 (MQ=255)

                                                      ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa                                   <  2:3165726/93‑1 (MQ=255)

                                                      ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa                                   >  1:4276717/1‑93 (MQ=255)

                                                        gccgcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACg                                 >  2:2579448/1‑93 (MQ=255)

                                                           gcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCa                              >  2:5354900/1‑93 (MQ=255)

                                                           gcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCa                              >  2:4720836/1‑93 (MQ=255)

                                                            cTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaa                             <  1:1021513/93‑1 (MQ=255)

                                                             taataaTCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaa                            >  1:1685468/1‑93 (MQ=255)

                                                              aataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaa                           >  1:928466/1‑93 (MQ=255)

                                                              aataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaa                           >  1:3126661/1‑93 (MQ=255)

                                                               ataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaaa                          <  1:6255623/93‑1 (MQ=255)

                                                               ataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaaa                          <  1:3021728/93‑1 (MQ=255)

                                                                taatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAc                         <  2:3642309/93‑1 (MQ=255)

                                                                 aatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAcc                        >  1:778305/1‑93 (MQ=255)

                                                                 aatCCCGAAAGGGTAAAAATAAGAACGCGCACCCGACGAACGTTGATCCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAcc                        <  2:4031551/93‑1 (MQ=255)

                                                                  atCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCg                       >  2:4374776/1‑93 (MQ=255)

                                                                   tCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGa                      >  1:760086/1‑93 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     <  1:2132802/93‑1 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     <  2:4903867/93‑1 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     <  2:5128151/93‑1 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     <  1:2343474/93‑1 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     >  1:330037/1‑93 (MQ=255)

                                                                    cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg                     >  1:1535289/1‑93 (MQ=255)

                                                                     ccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAgc                    >  2:2460182/1‑93 (MQ=255)

                                                                     ccGAAAGGATAAAGATAAGACCGCGCACCAGACGAACGTTGATTCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAgc                    <  2:6196105/93‑1 (MQ=255)

                                                                        aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc                 >  1:3829914/1‑93 (MQ=255)

                                                                        aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc                 <  2:5021623/93‑1 (MQ=255)

                                                                        aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc                 >  1:4428520/1‑93 (MQ=255)

                                                                        aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATCCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc                 <  1:3990056/93‑1 (MQ=255)

                                                                         aaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGccc                <  1:2255662/93‑1 (MQ=255)

                                                                           gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa              >  2:2773930/1‑93 (MQ=255)

                                                                           gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa              >  2:811636/1‑93 (MQ=255)

                                                                           gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa              >  1:3567046/1‑93 (MQ=255)

                                                                            ggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGaa             >  1:6223630/1‑93 (MQ=255)

                                                                              tAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAgg           <  1:3472695/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  2:4738411/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  1:2494026/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          >  2:1805875/1‑93 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  2:5637386/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  1:3324837/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  1:2026716/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          <  1:4842999/93‑1 (MQ=255)

                                                                               aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc          >  2:2735743/1‑93 (MQ=255)

                                                                                aaGATAAGACCGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCg         <  1:2350365/93‑1 (MQ=255)

                                                                                aaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCg         >  2:2897906/1‑93 (MQ=255)

                                                                                 aGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCgg        >  2:2360657/1‑93 (MQ=255)

                                                                                       gAACGCGCCCCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGc  <  2:1711475/93‑1 (MQ=255)

                                                                                       gAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGc  <  1:6194747/93‑1 (MQ=255)

TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGC  >  NC_000913/2674086‑2674265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`