BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,688,297	T→C	L295L (TTA→TTG)	yfhK ←	putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,688,297	0	T	C	100.0%	714.5 / NA	218	L295L (TTA→TTG)	yfhK	putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/120); total (98/120)

Only 100 of 220 total aligned reads displayed.

CAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA  >  NC_000913/2688207‑2688386

cAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCaa                                                                                         <  2:5415241/93‑1 (MQ=255)

   tttttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTc                                                                                      <  2:2325003/93‑1 (MQ=255)

      ttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGt                                                                                   >  1:4631833/1‑93 (MQ=255)

       tGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTg                                                                                  <  1:6001650/93‑1 (MQ=255)

           aaTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCt                                                                              <  2:1201484/93‑1 (MQ=255)

           aaTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCt                                                                              <  1:4302100/93‑1 (MQ=255)

            aTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTc                                                                             <  2:56445/93‑1 (MQ=255)

            aTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTc                                                                             >  1:2217295/1‑93 (MQ=255)

             ttGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcg                                                                            <  1:5283411/93‑1 (MQ=255)

              tGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcgc                                                                           <  2:2367613/93‑1 (MQ=255)

                 ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa                                                                        <  1:6305760/93‑1 (MQ=255)

                 ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa                                                                        >  2:1806949/1‑93 (MQ=255)

                  gctgctgctATCAAGAATGCTCACCGCCTCTTTTTGCTCTGTCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAt                                                                       <  2:4753031/93‑1 (MQ=255)

                    tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     >  2:5555673/1‑93 (MQ=255)

                    tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     >  1:4161200/1‑93 (MQ=255)

                    tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     >  1:4911758/1‑93 (MQ=255)

                     tctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    <  1:1761588/92‑1 (MQ=255)

                     gctgctATCAAGAATGCTCCCCACCTCTTTTTGCCCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    <  1:5171914/93‑1 (MQ=255)

                     gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    <  2:2191048/93‑1 (MQ=255)

                     gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    <  2:2820298/93‑1 (MQ=255)

                     gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    >  1:1172399/1‑93 (MQ=255)

                       tgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCg                                                                  >  1:2654131/1‑93 (MQ=255)

                        gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGc                                                                 >  2:3234385/1‑93 (MQ=255)

                        gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGc                                                                 >  1:1241488/1‑93 (MQ=255)

                         ctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGcc                                                                >  2:5354804/1‑93 (MQ=255)

                         ctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGcc                                                                >  1:1654523/1‑93 (MQ=255)

                          tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               <  2:182412/93‑1 (MQ=255)

                          tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               >  2:3608457/1‑93 (MQ=255)

                          tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               >  2:1355142/1‑93 (MQ=255)

                          tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               >  2:5314147/1‑93 (MQ=255)

                          tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               >  1:1794581/1‑93 (MQ=255)

                           aTCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAg                                                              >  1:6133001/1‑93 (MQ=255)

                            tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt                                                             >  2:1457196/1‑93 (MQ=255)

                            tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt                                                             <  1:2317165/93‑1 (MQ=255)

                            tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt                                                             >  2:5781585/1‑93 (MQ=255)

                             cAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTg                                                            <  2:1067630/93‑1 (MQ=255)

                              aaGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTgg                                                           >  2:605571/1‑93 (MQ=255)

                              aaGAATGCTCACCACCTCTTTTTGCGCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTgg                                                           <  1:4044550/93‑1 (MQ=255)

                               aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc                                                          <  2:2231409/93‑1 (MQ=255)

                               aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc                                                          >  1:5530111/1‑93 (MQ=255)

                               aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc                                                          >  1:4490137/1‑93 (MQ=255)

                                gAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCg                                                         <  1:960319/93‑1 (MQ=255)

                                 aaTGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGt                                                        <  2:4640375/93‑1 (MQ=255)

                                  aTGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGtt                                                       <  1:3408663/93‑1 (MQ=255)

                                    tcTCACCTCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGtttt                                                     <  1:5772475/92‑1 (MQ=255)

                                      tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa                                                   <  2:4980820/93‑1 (MQ=255)

                                      tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa                                                   >  1:2991789/1‑93 (MQ=255)

                                      tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa                                                   >  2:71046/1‑93 (MQ=255)

                                       caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa                                                  <  1:5291073/93‑1 (MQ=255)

                                       caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa                                                  >  1:6186070/1‑93 (MQ=255)

                                            ccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCAt                                             <  1:829402/93‑1 (MQ=255)

                                              tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga                                           <  1:1680814/93‑1 (MQ=255)

                                              tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga                                           <  2:4602003/93‑1 (MQ=255)

                                               ctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATgag                                          >  2:3136874/1‑93 (MQ=255)

                                               ctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATgag                                          <  1:3536028/93‑1 (MQ=255)

                                                 ttttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAt                                        <  1:1135171/93‑1 (MQ=255)

                                                  tttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATa                                       <  1:4005042/93‑1 (MQ=255)

                                                   ttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaa                                      >  2:3762272/1‑93 (MQ=255)

                                                    tGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaaa                                     <  1:3625206/93‑1 (MQ=255)

                                                     gCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAt                                    <  1:3488658/93‑1 (MQ=255)

                                                      ctctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATg                                   >  2:4458191/1‑93 (MQ=255)

                                                       tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt                                  >  1:3323248/1‑93 (MQ=255)

                                                       tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt                                  >  1:3192405/1‑93 (MQ=255)

                                                       tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt                                  >  1:5332133/1‑93 (MQ=255)

                                                        ctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTc                                 <  1:69187/93‑1 (MQ=255)

                                                         tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt                                <  2:147514/93‑1 (MQ=255)

                                                         tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt                                <  1:1413901/93‑1 (MQ=255)

                                                          ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt                               <  2:4946846/93‑1 (MQ=255)

                                                          ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt                               <  1:2957939/93‑1 (MQ=255)

                                                          ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt                               <  2:3887797/93‑1 (MQ=255)

                                                          ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGCGGCGTTTTTAATTCATGAGATAAATGTCtt                               >  2:4492812/1‑93 (MQ=255)

                                                            cGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaa                             <  2:4288006/93‑1 (MQ=255)

                                                              tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           <  1:2581655/93‑1 (MQ=255)

                                                              tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           <  2:3800040/93‑1 (MQ=255)

                                                              tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           >  1:3692060/1‑93 (MQ=255)

                                                              tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           <  2:2129628/93‑1 (MQ=255)

                                                               aaGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaaa                          >  2:5533869/1‑93 (MQ=255)

                                                                aGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAt                         >  2:880680/1‑93 (MQ=255)

                                                                 gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt                        <  1:3160855/93‑1 (MQ=255)

                                                                 gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt                        >  2:5026231/1‑93 (MQ=255)

                                                                  cGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTg                       <  2:6123526/93‑1 (MQ=255)

                                                                    gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt                     >  2:1104809/1‑93 (MQ=255)

                                                                    gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt                     <  1:1534316/93‑1 (MQ=255)

                                                                    gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt                     <  2:1392994/93‑1 (MQ=255)

                                                                     cccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATg                    <  2:4359328/93‑1 (MQ=255)

                                                                     cccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATg                    <  2:408154/93‑1 (MQ=255)

                                                                      ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg                   <  2:1296715/93‑1 (MQ=255)

                                                                      ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg                   <  2:571448/93‑1 (MQ=255)

                                                                      ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg                   <  2:3928080/93‑1 (MQ=255)

                                                                        gACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCg                 >  1:72452/1‑93 (MQ=255)

                                                                          cAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGtt               <  2:558146/93‑1 (MQ=255)

                                                                           aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              <  1:3451952/93‑1 (MQ=255)

                                                                           aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              >  2:6292674/1‑93 (MQ=255)

                                                                            aCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgg             >  2:3430304/1‑93 (MQ=255)

                                                                            aCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgg             <  1:4740157/93‑1 (MQ=255)

                                                                              cTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGa           <  2:4395449/93‑1 (MQ=255)

                                                                               tGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGGTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGAt          >  1:803947/1‑93 (MQ=255)

                                                                                 gTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTc        >  1:2910445/1‑93 (MQ=255)

                                                                                  tCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTcc       >  1:1964765/1‑93 (MQ=255)

                                                                                   cagccagcAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCa      <  1:1380605/93‑1 (MQ=255)

CAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA  >  NC_000913/2688207‑2688386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`