BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	307,684	T→C	L291L (TTA→TTG)	yagX ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	307,684	0	T	C	100.0%	727.4 / NA	225	L291L (TTA→TTG)	yagX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/113); total (112/113)

Only 100 of 228 total aligned reads displayed.

CGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGTAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTCCC  >  NC_000913/307595‑307773

cGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaaa                                                                                        >  2:4387966/1‑93 (MQ=255)

 gggTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaaaa                                                                                       >  1:1110166/1‑93 (MQ=255)

  ggTATCCACTTCATGATTGCCCCTAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaaaaa                                                                                      >  2:5918464/1‑93 (MQ=255)

  ggTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCaaaaa                                                                                      <  2:1710275/93‑1 (MQ=255)

   gTATCCCCTTCATGATTGCCCATAGGAAAGTACTGAACGCTTAGTACCCGCCCATCGCGGGTGAGATGTACTGCGCCCGCCGCCGGCAAAAAg                                                                                     <  2:5468466/93‑1 (MQ=255)

   gTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAg                                                                                     <  1:4530138/93‑1 (MQ=255)

   gTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAg                                                                                     <  1:4041031/93‑1 (MQ=255)

   gTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAg                                                                                     >  2:4153580/1‑93 (MQ=255)

   gTATCCACTTCATGATTCCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAg                                                                                     <  2:3662718/93‑1 (MQ=255)

      tCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCg                                                                                  >  1:2877345/1‑93 (MQ=255)

       ccACTTCATGATTGCCCATAGTGAAGTTCTGACCGCTTAGTAGCCGCCAATCCCGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGa                                                                                 <  2:4444525/93‑1 (MQ=255)

       ccACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGa                                                                                 >  2:2684034/1‑93 (MQ=255)

        cACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGAt                                                                                >  1:330683/1‑93 (MQ=255)

        cACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGAt                                                                                >  1:386799/1‑93 (MQ=255)

         ccTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATc                                                                               <  1:2493244/92‑1 (MQ=255)

         aCTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATc                                                                               <  1:3521551/93‑1 (MQ=255)

          cTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCa                                                                              <  2:1983033/93‑1 (MQ=255)

            tCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACt                                                                            <  2:4012765/93‑1 (MQ=255)

            tCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACt                                                                            >  1:1881186/1‑93 (MQ=255)

             cATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTg                                                                           >  2:2094495/1‑93 (MQ=255)

               tGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGc                                                                         >  1:420142/1‑93 (MQ=255)

                 aTTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGt                                                                       >  2:595410/1‑93 (MQ=255)

                 aTTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGt                                                                       <  2:1060063/93‑1 (MQ=255)

                  ttGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTg                                                                      >  1:4290029/1‑93 (MQ=255)

                   tGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTgg                                                                     >  2:582967/1‑93 (MQ=255)

                    gCCCATAGGGAACTTCTGAACGCTTAGTAGCCGCCCATCCCGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGc                                                                    <  1:1514735/93‑1 (MQ=255)

                       cATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGa                                                                 >  1:5635069/1‑93 (MQ=255)

                        aTAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGAc                                                                >  2:478913/1‑93 (MQ=255)

                        aTAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGAc                                                                >  2:3124345/1‑93 (MQ=255)

                         tAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACt                                                               <  2:5430209/93‑1 (MQ=255)

                             gAAGTTCTTAACGCTTAGTGGCCGCCAATCGCGGGTTAGTTTTATTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTAGCTGACTGgct                                                           <  2:1169994/93‑1 (MQ=255)

                              aaGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctg                                                          >  1:2019734/1‑93 (MQ=255)

                                gTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGgctgct                                                        >  1:5568030/1‑93 (MQ=255)

                                 ttCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGctgctg                                                       >  1:3194163/1‑93 (MQ=255)

                                 ttCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGctgctg                                                       >  1:6089298/1‑93 (MQ=255)

                                 ttCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCCGCAAAAAGGCGATCACTGGCGTGGCTGACTGGctgctg                                                       >  1:2292097/1‑93 (MQ=255)

                                   cTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTc                                                     >  1:108826/1‑93 (MQ=255)

                                    tGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCg                                                    >  1:4992800/1‑93 (MQ=255)

                                       aCGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAg                                                 >  2:2154886/1‑93 (MQ=255)

                                       aCGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAg                                                 <  2:868619/93‑1 (MQ=255)

                                        cgtttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                <  2:1467821/90‑1 (MQ=255)

                                        cGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                <  1:4219890/93‑1 (MQ=255)

                                        cGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                <  1:2990636/93‑1 (MQ=255)

                                        cGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGa                                                >  1:6303871/1‑93 (MQ=255)

                                         gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               <  2:1875032/93‑1 (MQ=255)

                                         gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               >  1:993513/1‑93 (MQ=255)

                                         gCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               >  1:762310/1‑93 (MQ=255)

                                         cctcagtagCCGCCCACCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAt                                               <  2:5724121/89‑1 (MQ=255)

                                          cTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtg                                              >  2:4239336/1‑93 (MQ=255)

                                           ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             <  2:4914403/93‑1 (MQ=255)

                                           ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             >  1:2689114/1‑93 (MQ=255)

                                           ttAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             >  1:2105424/1‑93 (MQ=255)

                                           ttAGTAGCCGCCCATCACGGGTGAGATGCACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtgg                                             >  1:1001687/1‑93 (MQ=255)

                                            tagtagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggg                                            >  2:2820867/1‑92 (MQ=255)

                                             attagCCCCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtg                                           <  1:2867462/91‑1 (MQ=255)

                                             agtagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtg                                           >  2:3267533/1‑93 (MQ=255)

                                              ttagCGGCCCACCAGGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtgg                                          <  2:1190972/92‑1 (MQ=255)

                                              gtagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtgg                                          <  1:130121/93‑1 (MQ=255)

                                              gtagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtgg                                          <  2:3840289/93‑1 (MQ=255)

                                              gtagCCGCCCAGCGCGGGTGGGGGGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGAtggtgg                                          <  1:1192848/93‑1 (MQ=255)

                                               tagCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGa                                         <  1:3021046/93‑1 (MQ=255)

                                                 gccgccCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGc                                       <  1:2545963/93‑1 (MQ=255)

                                                 gcccccCATCACGGGTGAGATGTCCTCCGCCCGCCGCCGGCAAAAAGGCGCTCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGc                                       <  1:3385740/93‑1 (MQ=255)

                                                     cccATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGc                                   >  2:1605509/1‑93 (MQ=255)

                                                     cccATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGc                                   >  2:6248259/1‑93 (MQ=255)

                                                      ccATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGcc                                  <  1:4848826/93‑1 (MQ=255)

                                                       cATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCt                                 >  1:1616094/1‑93 (MQ=255)

                                                       cATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCt                                 <  1:1741005/93‑1 (MQ=255)

                                                       cATCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCCGTCGAAGATGGTGGAGCTGGCCt                                 >  1:1388866/1‑93 (MQ=255)

                                                        aTCAGGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTg                                <  1:4817307/93‑1 (MQ=255)

                                                        aTCACGGGTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGGAGATGGTGGAGCTGGCCTg                                >  1:5508468/1‑93 (MQ=255)

                                                          cACGGGTGAGATTTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGt                              <  1:3696301/93‑1 (MQ=255)

                                                               gTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTccc                         <  2:2604879/93‑1 (MQ=255)

                                                               gTGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTccc                         <  2:424651/93‑1 (MQ=255)

                                                                tGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGGGCTGGCCTGGTTTcccc                        >  2:5628957/1‑93 (MQ=255)

                                                                tGAGATGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTcccc                        >  2:638370/1‑93 (MQ=255)

                                                                  agaTGTCCTTCCCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAg                      <  2:4840066/93‑1 (MQ=255)

                                                                    aTGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGa                    <  1:1270508/93‑1 (MQ=255)

                                                                     tGTACTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGaa                   >  1:3145839/1‑93 (MQ=255)

                                                                       tccTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAg                 <  2:5162685/91‑1 (MQ=255)

                                                                       tACTCCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAg                 <  2:2378905/93‑1 (MQ=255)

                                                                        aCTTCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAgg                >  1:1012183/1‑93 (MQ=255)

                                                                         ctccgcccgccGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGc               <  1:2365908/90‑1 (MQ=255)

                                                                          ttCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGcc              >  1:5178593/1‑93 (MQ=255)

                                                                          ttCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGcc              >  2:610332/1‑93 (MQ=255)

                                                                           tCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCg             <  2:74628/93‑1 (MQ=255)

                                                                           tCGCCCGCCGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCg             >  2:252182/1‑93 (MQ=255)

                                                                              cccgccGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTaa          >  2:5010218/1‑93 (MQ=255)

                                                                              cccgccGCCGGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTaa          >  1:6006299/1‑93 (MQ=255)

                                                                               ccgccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTaaa         >  1:5374311/1‑93 (MQ=255)

                                                                                cgccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAAt        >  1:2932776/1‑93 (MQ=255)

                                                                                 gccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAAtt       >  1:5273538/1‑92 (MQ=255)

                                                                                  ccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCt      >  1:51451/1‑93 (MQ=255)

                                                                                  ccgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCt      >  1:3680185/1‑93 (MQ=255)

                                                                                   cgccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCtt     <  1:3548891/93‑1 (MQ=255)

                                                                                     ccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTcc   >  2:1347866/1‑93 (MQ=255)

                                                                                     ccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTcc   <  1:5331182/93‑1 (MQ=255)

                                                                                     ccgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTcc   <  1:508260/93‑1 (MQ=255)

                                                                                      cgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTccc  >  2:317181/1‑93 (MQ=255)

                                                                                      cgGCAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTccc  <  2:1438807/93‑1 (MQ=255)

CGGGTATCCACTTCATGATTGCCCATAGTGAAGTTCTGAACGCTTAGTAGCCGCCCATCACGGGTGAGATGTACTTCGCCCGCCGCCGGTAAAAAGGCGATCACTGGCGTGGCTGACTGGCTGCTGTCGAAGATGGTGGAGCTGGCCTGGTTTCCCCAGGAAAGGCCGTAAATCTTCCC  >  NC_000913/307595‑307773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`