BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,732,197	T→C	intergenic (‑4/+126)	clpB ← / ← yfiH	ClpB/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,732,197	0	T	C	100.0%	816.5 / NA	251	intergenic (‑4/+126)	clpB/yfiH	ClpB/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/142); total (109/142)

Only 100 of 266 total aligned reads displayed.

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

gATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccc                                                                                         >  1:4095846/1‑93 (MQ=255)

 aTAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccct                                                                                        <  1:4439637/93‑1 (MQ=255)

  tAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccctc                                                                                       <  2:5952302/93‑1 (MQ=255)

  tAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccctc                                                                                       >  1:4078866/1‑93 (MQ=255)

    aaTTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTccc                                                                                     >  2:5455123/1‑93 (MQ=255)

     aTTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCa                                                                                    <  2:2675908/93‑1 (MQ=255)

        ggTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATaa                                                                                 >  1:4398976/1‑93 (MQ=255)

         gTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAc                                                                                <  1:5123436/93‑1 (MQ=255)

         gTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAc                                                                                <  1:4811383/93‑1 (MQ=255)

          ttGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACg                                                                               <  1:1922982/93‑1 (MQ=255)

            gTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGa                                                                             >  2:5891115/1‑93 (MQ=255)

             tCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGAt                                                                            <  1:1215972/93‑1 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATTaa                                                                         <  2:5629761/93‑1 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         <  1:1099194/93‑1 (MQ=255)

                 gCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaaa                                                                        <  2:384281/93‑1 (MQ=255)

                 gCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaaa                                                                        >  1:3799391/1‑93 (MQ=255)

                   ccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGt                                                                      >  2:4361191/1‑93 (MQ=255)

                    cGAGTGCAAGTGATTGGGCATCGGCAAGACCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGtt                                                                     <  2:3687188/93‑1 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   <  1:2506734/93‑1 (MQ=255)

                      aGTGCAAGTCATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATATCCCCTCCCATAACGGATCAAAGTTGc                                                                   <  2:4077707/93‑1 (MQ=255)

                       gTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCt                                                                  >  2:1351085/1‑93 (MQ=255)

                       gTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCt                                                                  >  2:2957481/1‑93 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 <  1:3722718/93‑1 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 <  1:2665295/93‑1 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 >  2:1964502/1‑93 (MQ=255)

                         gCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTAc                                                                <  2:5736721/93‑1 (MQ=255)

                          cAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACt                                                               <  1:3525298/93‑1 (MQ=255)

                           aaGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTg                                                              <  1:3421808/93‑1 (MQ=255)

                            aGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTgg                                                             >  1:5057600/1‑93 (MQ=255)

                            aGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTgg                                                             <  2:1239995/93‑1 (MQ=255)

                             gTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGga                                                            <  1:2156967/93‑1 (MQ=255)

                              tcaTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgag                                                           >  2:3501344/3‑93 (MQ=255)

                              tGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgag                                                           <  1:2991799/93‑1 (MQ=255)

                               gATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgaga                                                          <  2:604575/93‑1 (MQ=255)

                                aTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAt                                                         >  1:2314925/1‑93 (MQ=255)

                                aTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAt                                                         >  2:2530320/1‑93 (MQ=255)

                                aTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAt                                                         >  1:5627692/1‑93 (MQ=255)

                                  tGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTa                                                       >  2:1481949/1‑93 (MQ=255)

                                    ggCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTaaa                                                     <  1:5800591/93‑1 (MQ=255)

                                       aTCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGa                                                  <  1:3140612/93‑1 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 >  2:6225442/1‑93 (MQ=255)

                                         cGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAgg                                                <  2:2553606/93‑1 (MQ=255)

                                           gCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATGAAAGTTGCTACTGGAGATTAAATGAGGTc                                              >  2:891655/1‑93 (MQ=255)

                                           gCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTc                                              >  2:2337840/1‑93 (MQ=255)

                                           gCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTc                                              <  2:479989/93‑1 (MQ=255)

                                            cAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCa                                             <  2:2865045/93‑1 (MQ=255)

                                            cAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCa                                             >  2:958422/1‑93 (MQ=255)

                                             aaGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCAt                                            >  1:430768/1‑93 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           <  1:1396411/93‑1 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           >  2:833222/1‑93 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           <  1:1372923/93‑1 (MQ=255)

                                               gagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATcc                                          >  1:5153707/1‑93 (MQ=255)

                                               gagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATcc                                          >  2:5973587/1‑93 (MQ=255)

                                                agCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATccc                                         <  1:5373161/93‑1 (MQ=255)

                                                   aaGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCa                                      >  1:3387082/1‑93 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    <  2:3542546/93‑1 (MQ=255)

                                                      cTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatt                                   >  2:4484340/1‑93 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  <  1:5149420/93‑1 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  <  1:2284394/93‑1 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  >  2:3085618/1‑93 (MQ=255)

                                                        ggAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattat                                 >  2:1783483/1‑93 (MQ=255)

                                                        ggAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattat                                 >  1:2898543/1‑93 (MQ=255)

                                                        ggAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattat                                 >  1:2718028/1‑93 (MQ=255)

                                                         gAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattatt                                <  1:545617/93‑1 (MQ=255)

                                                         gAATGTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattatt                                <  1:624682/93‑1 (MQ=255)

                                                          aaTTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTc                               >  2:4635327/1‑93 (MQ=255)

                                                            tttATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCaa                             <  2:1159049/93‑1 (MQ=255)

                                                               attaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGt                          <  1:787572/93‑1 (MQ=255)

                                                                ttaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGtt                         <  2:2214893/93‑1 (MQ=255)

                                                                ttaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGtt                         >  1:5997356/1‑93 (MQ=255)

                                                                  aGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAt                       <  1:697172/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  2:3554310/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  2:2241438/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  1:5504223/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  1:4843153/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  1:4829400/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      >  1:2115400/1‑93 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      >  1:2859303/1‑93 (MQ=255)

                                                                    tAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTg                     >  2:5471002/1‑93 (MQ=255)

                                                                     aaGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGa                    <  2:4243727/93‑1 (MQ=255)

                                                                     aaGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGa                    <  2:4920454/93‑1 (MQ=255)

                                                                        aCGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCa                 <  2:2814855/93‑1 (MQ=255)

                                                                         cGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGACATCCCTCAATTATTCAAGGTTATTGACCAg                >  1:1106417/1‑93 (MQ=255)

                                                                          gATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               >  2:1085579/1‑93 (MQ=255)

                                                                            tCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGTTTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAtt             >  2:6009407/1‑93 (MQ=255)

                                                                            tCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAtt             <  2:3174374/93‑1 (MQ=255)

                                                                            tCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAtt             >  1:57147/1‑93 (MQ=255)

                                                                              cAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTaa           >  2:4781600/1‑93 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         >  2:494126/1‑93 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGCCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         >  1:1851080/1‑93 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       >  2:4936525/1‑93 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       <  1:1704416/93‑1 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       <  1:3897153/93‑1 (MQ=255)

                                                                                    cATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaa     >  1:1514459/1‑93 (MQ=255)

                                                                                     aTAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaa    <  2:733659/93‑1 (MQ=255)

                                                                                     aTAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaa    <  2:1601622/93‑1 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   >  2:5799645/1‑93 (MQ=255)

                                                                                      tAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaa   >  2:5324983/1‑93 (MQ=255)

                                                                                       aaCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaag  <  1:4696070/93‑1 (MQ=255)

                                                                                       aaCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaag  >  1:4888735/1‑93 (MQ=255)

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`