BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,777,297	T→C	T1194A (ACG→GCG)	ypjA ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,777,297	0	T	C	100.0%	749.8 / NA	235	T1194A (ACG→GCG)	ypjA	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (135/100); total (135/100)

Only 100 of 245 total aligned reads displayed.

CATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA  >  NC_000913/2777207‑2777386

 atTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCaaa                                                                                        <  2:1041785/93‑1 (MQ=255)

 atTGGTCAGCTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCaaa                                                                                        <  2:5050901/93‑1 (MQ=255)

  ttGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAc                                                                                       <  2:2691439/93‑1 (MQ=255)

  ttGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAAc                                                                                       <  1:3971613/93‑1 (MQ=255)

    ggTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGa                                                                                     >  2:5213429/1‑93 (MQ=255)

      tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg                                                                                   >  1:6252753/1‑93 (MQ=255)

      tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg                                                                                   <  2:4138193/93‑1 (MQ=255)

      tCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAg                                                                                   >  2:42333/1‑93 (MQ=255)

        aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa                                                                                 >  2:2576301/1‑93 (MQ=255)

        aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa                                                                                 >  2:607841/1‑93 (MQ=255)

        aGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCa                                                                                 <  1:674007/93‑1 (MQ=255)

           ttCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcc                                                                              >  1:2147579/1‑93 (MQ=255)

           ttCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcc                                                                              >  2:2277987/1‑93 (MQ=255)

            tCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtccc                                                                             >  1:2603467/1‑93 (MQ=255)

            tCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtccc                                                                             >  1:1320880/1‑93 (MQ=255)

             ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc                                                                            >  1:5352537/1‑93 (MQ=255)

             ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc                                                                            >  2:1299666/1‑93 (MQ=255)

             ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc                                                                            >  2:775275/1‑93 (MQ=255)

             ccAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccc                                                                            >  2:3234868/1‑93 (MQ=255)

              cAGTTCCTGTTGCCGTCAATTTTCAGGACATACTAATAGGTCCCAAAATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccct                                                                           <  1:1195220/93‑1 (MQ=255)

                gTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctcc                                                                         >  1:5786088/1‑93 (MQ=255)

                gTTGCTGTTGCCGTCACTTTGCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctcc                                                                         <  2:536706/93‑1 (MQ=255)

                 ttGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCAtcccctccc                                                                        >  2:5937836/1‑93 (MQ=255)

                   gCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTccccc                                                                      >  1:780591/1‑93 (MQ=255)

                     tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCACCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTg                                                                    <  1:706932/93‑1 (MQ=255)

                     tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCCACCGAATCATCCCCTCCCCCTg                                                                    >  2:2768893/1‑93 (MQ=255)

                     tGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTg                                                                    >  2:2387148/1‑93 (MQ=255)

                      gTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGt                                                                   >  2:5989550/1‑93 (MQ=255)

                       ttGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCTCTCCCCCTgct                                                                  >  1:5850373/1‑91 (MQ=255)

                       ttGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGtt                                                                  <  2:4840133/93‑1 (MQ=255)

                         gCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACNNAGCATCCCCTCCCCNTGtntt                                                                >  1:2888564/1‑93 (MQ=255)

                         gCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGtttt                                                                <  1:4809330/93‑1 (MQ=255)

                          ccGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTc                                                               >  1:402244/1‑93 (MQ=255)

                          ccGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTc                                                               >  2:4870160/1‑93 (MQ=255)

                           cGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCa                                                              >  1:3096558/1‑93 (MQ=255)

                            gTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCAc                                                             >  1:3202032/1‑93 (MQ=255)

                             tCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCAcc                                                            >  2:4441885/1‑93 (MQ=255)

                               aCTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAg                                                          <  2:3128776/93‑1 (MQ=255)

                                cTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGc                                                         >  2:3199324/1‑93 (MQ=255)

                                 ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg                                                        >  2:1433125/1‑93 (MQ=255)

                                 ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg                                                        >  1:5616988/1‑93 (MQ=255)

                                 ttttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCg                                                        <  1:3864261/93‑1 (MQ=255)

                                   ttCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTc                                                      <  2:2016557/93‑1 (MQ=255)

                                       ggACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcg                                                  >  2:6267260/1‑93 (MQ=255)

                                        gACATACTCATAGGTCCCAAGATCAACGAATCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcgc                                                 <  2:1884216/93‑1 (MQ=255)

                                        gACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATcgc                                                 >  2:2099915/1‑93 (MQ=255)

                                            tACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcg                                             >  2:2117392/1‑93 (MQ=255)

                                            tACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATCGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcg                                             >  2:1592801/1‑93 (MQ=255)

                                             aCTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGcgtcgt                                            >  1:5146840/1‑93 (MQ=255)

                                               tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa                                          <  1:4845053/93‑1 (MQ=255)

                                               tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa                                          >  2:4955593/1‑93 (MQ=255)

                                               tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa                                          <  1:1450957/93‑1 (MQ=255)

                                               tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCa                                          <  2:4112638/93‑1 (MQ=255)

                                               tCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCACCCTGTTTTCACCAGCGTCATCGCGTCGTCa                                          >  2:2876909/1‑93 (MQ=255)

                                                cATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAg                                         >  2:4022135/1‑93 (MQ=255)

                                                 aTAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGa                                        >  1:648636/1‑93 (MQ=255)

                                                  tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc                                       >  1:4245598/1‑93 (MQ=255)

                                                  tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc                                       >  2:813363/1‑93 (MQ=255)

                                                  tAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGAc                                       >  2:5770639/1‑93 (MQ=255)

                                                   aGGACCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACt                                      <  1:1275071/93‑1 (MQ=255)

                                                    ggTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACtg                                     <  1:1835428/93‑1 (MQ=255)

                                                      tCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACtgtg                                   >  1:4340199/1‑93 (MQ=255)

                                                       cccAAGATCAACGAACCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTgg                                  <  2:299900/93‑1 (MQ=255)

                                                       cccAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTgg                                  <  2:4593650/93‑1 (MQ=255)

                                                         cAAGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGc                                >  1:4505436/1‑93 (MQ=255)

                                                         cAAGATAAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGc                                <  2:4992002/93‑1 (MQ=255)

                                                          aaGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCt                               >  1:4211084/1‑93 (MQ=255)

                                                          aaGATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCt                               >  2:3642121/1‑93 (MQ=255)

                                                            gATCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGa                             <  1:2719515/93‑1 (MQ=255)

                                                             aTCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGAc                            <  1:2400808/93‑1 (MQ=255)

                                                              tCAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACg                           >  1:2469125/1‑93 (MQ=255)

                                                               cAACGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGc                          >  2:3882780/1‑93 (MQ=255)

                                                                aaCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGcc                         <  2:5063129/93‑1 (MQ=255)

                                                                 aCGAAGCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCg                        <  2:687358/93‑1 (MQ=255)

                                                                 aCGAAACCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCg                        <  1:5393332/93‑1 (MQ=255)

                                                                    aaaCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTa                     >  2:2216748/1‑93 (MQ=255)

                                                                    aaaCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTa                     <  2:3754888/93‑1 (MQ=255)

                                                                      aCCGCCGGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATc                   <  2:7152/93‑1 (MQ=255)

                                                                       ccgccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATcc                  <  1:5506659/93‑1 (MQ=255)

                                                                        cggcgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCt                 <  1:927536/90‑1 (MQ=255)

                                                                        cgccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCt                 <  1:2972251/93‑1 (MQ=255)

                                                                         gccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTg                >  2:4425545/1‑93 (MQ=255)

                                                                         gccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTg                <  2:3456678/93‑1 (MQ=255)

                                                                          ccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGa               >  1:3788259/1‑93 (MQ=255)

                                                                          ccgGTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGa               <  1:1070022/93‑1 (MQ=255)

                                                                             gTATTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACa            >  2:1618037/1‑93 (MQ=255)

                                                                               aTTGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACaaa          >  1:4004225/1‑93 (MQ=255)

                                                                                ttGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAg         >  1:3750716/1‑93 (MQ=255)

                                                                                 tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa        <  1:2299879/93‑1 (MQ=255)

                                                                                 tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa        <  1:4377255/93‑1 (MQ=255)

                                                                                 tGCCCAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGa        <  2:906857/93‑1 (MQ=255)

                                                                                   cccAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtt      >  2:913481/1‑93 (MQ=255)

                                                                                   cccAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtt      >  2:1110761/1‑93 (MQ=255)

                                                                                     cAGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGAtttt    >  2:2929397/1‑93 (MQ=255)

                                                                                      aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa   <  1:4597006/93‑1 (MQ=255)

                                                                                      aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa   <  2:1233828/93‑1 (MQ=255)

                                                                                      aGCGCAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTa   <  1:6084726/93‑1 (MQ=255)

                                                                                       gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa  <  1:3684089/93‑1 (MQ=255)

                                                                                       gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa  <  2:1510024/93‑1 (MQ=255)

                                                                                       gcgcAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTaa  >  2:1218388/1‑93 (MQ=255)

CATTGGTCAGGTTCCAGTTGCTGTTGCCGTCACTTTTCAGGACATACTCATAGGTCCCAAGATCAACGAAACCGCCGGTATTGCCCAGCGTAAACGAAGCATCCCCTCCCCCTGTTTTCACCAGCGTCATCGCGTCGTCAGACTGTGGGCTGACGCCGGTATCCTGAACAAAGATTTTAA  >  NC_000913/2777207‑2777386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`