BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,779,396	C→T	S494N (AGT→AAT)	ypjA ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,779,396	0	C	T	100.0%	705.1 / NA	187	S494N (AGT→AAT)	ypjA	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/92); total (95/92)

Only 100 of 190 total aligned reads displayed.

TAATTAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCACTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGCCGTA  >  NC_000913/2779306‑2779485

tAATTAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTg                                                                                         >  1:194537/1‑93 (MQ=255)

 aaTTAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGc                                                                                        >  1:1862948/1‑93 (MQ=255)

  aTTAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGcc                                                                                       >  2:6256857/1‑93 (MQ=255)

   ttAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGccc                                                                                      >  2:286211/1‑93 (MQ=255)

     aGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGt                                                                                    <  1:413312/93‑1 (MQ=255)

     aGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGt                                                                                    <  1:3367465/93‑1 (MQ=255)

     aGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGt                                                                                    >  2:3577412/1‑93 (MQ=255)

      gCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGtc                                                                                   <  2:3340070/93‑1 (MQ=255)

      gCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGtc                                                                                   >  1:3059282/1‑93 (MQ=255)

        ctcccctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGtctc                                                                                 >  2:3375838/1‑93 (MQ=255)

         tcccctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTcc                                                                                >  1:1007283/1‑93 (MQ=255)

         tcccctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTcc                                                                                <  2:4500060/93‑1 (MQ=255)

          cccctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCt                                                                               >  2:2954396/1‑93 (MQ=255)

           ccctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTg                                                                              >  2:3825581/1‑93 (MQ=255)

            cctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTgg                                                                             >  1:3154275/1‑93 (MQ=255)

             ctccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGt                                                                            >  2:1005058/1‑93 (MQ=255)

               ccGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTa                                                                          <  1:4576674/93‑1 (MQ=255)

                cGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTaa                                                                         <  1:5437998/93‑1 (MQ=255)

                cGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTaa                                                                         <  1:2104959/93‑1 (MQ=255)

                 ggTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTTTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAAc                                                                        <  2:242532/93‑1 (MQ=255)

                  gTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAAcc                                                                       >  2:1154649/1‑93 (MQ=255)

                   tAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAAccc                                                                      <  1:2664219/93‑1 (MQ=255)

                    aaTAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAAcccc                                                                     >  2:3217162/1‑93 (MQ=255)

                     aTAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCa                                                                    >  2:6143600/1‑93 (MQ=255)

                       agtgaagtgaGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCAtg                                                                  <  2:600923/93‑1 (MQ=255)

                       agtgaagtgaGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCAtg                                                                  <  2:4881751/93‑1 (MQ=255)

                          gaagtgaGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGc                                                               <  1:4482231/93‑1 (MQ=255)

                            agtgaGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCaa                                                             <  2:5813078/93‑1 (MQ=255)

                               gagagaGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATAc                                                          <  1:2314307/93‑1 (MQ=255)

                               gagagaGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATAc                                                          <  1:5199330/93‑1 (MQ=255)

                                     gCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCgg                                                    >  1:1039237/1‑93 (MQ=255)

                                      cTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGt                                                   >  2:4189356/1‑93 (MQ=255)

                                      cTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGt                                                   <  2:2663913/93‑1 (MQ=255)

                                       ttgttgTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGta                                                  >  1:3659338/1‑93 (MQ=255)

                                       ttgttgTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGta                                                  <  2:1450302/93‑1 (MQ=255)

                                        tgttgtATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGtat                                                 >  2:1440407/1‑93 (MQ=255)

                                        tgttgtATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGtat                                                 >  1:5062791/1‑93 (MQ=255)

                                         gttgtATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGtata                                                <  1:5480565/93‑1 (MQ=255)

                                           tgtATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGa                                              >  1:4218181/1‑93 (MQ=255)

                                            gtATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGACCGTCTCATGGTTAACCCCATGTGCAATACCGCCGGTATAGAc                                             >  1:3879387/1‑93 (MQ=255)

                                              aTCCTTCGATATCAGTCCCTGCTCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCCATACCGCCGGAATAGACaa                                           <  2:6164494/93‑1 (MQ=255)

                                               tCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAAt                                          <  2:4783779/93‑1 (MQ=255)

                                                cgttCGAGATCAGTCCCTGCACCAGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATc                                         <  1:2996030/91‑1 (MQ=255)

                                                 cTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCa                                        >  2:3891863/1‑93 (MQ=255)

                                                  ttCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAg                                       >  1:1371608/1‑93 (MQ=255)

                                                  ttCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAg                                       <  1:4376631/93‑1 (MQ=255)

                                                  ttCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAg                                       >  1:3308763/1‑93 (MQ=255)

                                                   tCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGc                                      <  2:5679485/93‑1 (MQ=255)

                                                   tCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGc                                      >  2:69905/1‑93 (MQ=255)

                                                   tCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGc                                      <  1:4728723/93‑1 (MQ=255)

                                                     gacatCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGa                                    >  2:1621007/4‑93 (MQ=255)

                                                     gATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGa                                    <  2:5351790/93‑1 (MQ=255)

                                                     gATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGa                                    >  2:1843638/1‑93 (MQ=255)

                                                      atatCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAg                                   >  1:2952336/1‑93 (MQ=255)

                                                      atatCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAg                                   >  1:5909335/1‑93 (MQ=255)

                                                      atatCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAg                                   >  2:4432957/1‑93 (MQ=255)

                                                        atCAGTCCCTGCCCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGcc                                 <  2:4342005/93‑1 (MQ=255)

                                                        atCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGcc                                 <  1:4369388/93‑1 (MQ=255)

                                                         tCAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCt                                >  1:3445238/1‑93 (MQ=255)

                                                          cAGTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTc                               <  1:5488793/93‑1 (MQ=255)

                                                            gTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACTCCATGTGCAATCCCGCCGGTATAGACAATCAGCGAGCCTCCg                             <  1:3376041/93‑1 (MQ=255)

                                                            gTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCg                             <  2:798268/93‑1 (MQ=255)

                                                            gTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCg                             >  1:3997063/1‑93 (MQ=255)

                                                            gTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCg                             <  2:580234/93‑1 (MQ=255)

                                                            gTCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCg                             <  2:2287962/93‑1 (MQ=255)

                                                             tCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCgg                            <  2:936085/93‑1 (MQ=255)

                                                             tCCCTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCgg                            <  1:2941565/93‑1 (MQ=255)

                                                              cccTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGgc                           >  1:895980/1‑93 (MQ=255)

                                                               ccTGCACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGgcg                          >  1:6262818/1‑93 (MQ=255)

                                                                   cACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTaa                      <  2:174428/93‑1 (MQ=255)

                                                                   cACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTaa                      <  2:5504928/93‑1 (MQ=255)

                                                                   cACCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTaa                      <  2:4056046/93‑1 (MQ=255)

                                                                    aCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAat                     >  1:3274757/1‑93 (MQ=255)

                                                                    aCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAat                     >  1:1392620/1‑93 (MQ=255)

                                                                    aCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAat                     >  1:5774785/1‑93 (MQ=255)

                                                                    aCCCGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAat                     <  1:2531252/93‑1 (MQ=255)

                                                                     cccGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAata                    <  1:6107283/93‑1 (MQ=255)

                                                                     cccGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAata                    <  2:5183119/93‑1 (MQ=255)

                                                                     cccGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAata                    <  2:5120951/93‑1 (MQ=255)

                                                                     cccGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAata                    >  1:2366483/1‑93 (MQ=255)

                                                                      ccGTGTTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAatat                   <  2:2929817/93‑1 (MQ=255)

                                                                      ccGTGTGGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAatat                   <  2:18618/93‑1 (MQ=255)

                                                                       cGTGTTGGCACCTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATAtt                  <  1:4825538/93‑1 (MQ=255)

                                                                        gtgtTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATtg                 >  2:3382597/1‑93 (MQ=255)

                                                                         tgtTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATtgc                >  2:5978047/1‑93 (MQ=255)

                                                                          gtTGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGACTCCGGCGCTAATATtgct               >  1:2187930/1‑93 (MQ=255)

                                                                           ttGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATtgctg              >  2:1327971/1‑93 (MQ=255)

                                                                           ttGGCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATtgctg              >  2:1525779/1‑93 (MQ=255)

                                                                              gCAACTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCa           >  1:6023433/1‑93 (MQ=255)

                                                                                aaCTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAAt         <  1:5967204/93‑1 (MQ=255)

                                                                                aaCTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAAt         <  2:2161314/93‑1 (MQ=255)

                                                                                aaCTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAAt         <  2:2048494/93‑1 (MQ=255)

                                                                                aaCTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAAt         <  1:4982876/93‑1 (MQ=255)

                                                                                  cTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTg       >  2:1033246/1‑93 (MQ=255)

                                                                                  cTAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTg       >  2:1656426/1‑93 (MQ=255)

                                                                                   tAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGc      >  1:1602837/1‑93 (MQ=255)

                                                                                   tAAAGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGc      >  1:385111/1‑93 (MQ=255)

                                                                                    aaaGCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGcc     <  1:3915857/93‑1 (MQ=255)

                                                                                       gCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGCCGTa  >  1:5727996/1‑93 (MQ=255)

                                                                                       gCATTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGCCGTa  >  2:34122/1‑93 (MQ=255)

TAATTAGCCTCCCCTCCGGTAATAGTGAAGTGAGAGAGCTTGTTGTATCCTTCGATATCAGTCCCTGCACCCGTGTTGGCAACTAAAGCACTGCCCGTCTCCTGGTTAACCCCATGTGCAATACCGCCGGTATAGACAATCAGCGAGCCTCCGGCGCTAATATTGCTGCCAATTGCCGTA  >  NC_000913/2779306‑2779485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`