Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,794,501 A→G S103P (TCT→CCT)  ygaU ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,794,5010AG100.0% 660.9 / NA 202S103P (TCT→CCT) ygaUhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (111/91);  total (111/91)

Only 100 of 205 total aligned reads displayed.

TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG  >  NC_000913/2794411‑2794590
                                                                                          |                                                                                         
ttAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCt                                                                                         <  1:3966647/93‑1 (MQ=255)
   gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa                                                                                      <  1:4049461/93‑1 (MQ=255)
   gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa                                                                                      <  2:3671359/93‑1 (MQ=255)
   gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa                                                                                      <  2:191537/93‑1 (MQ=255)
   gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa                                                                                      <  1:6306849/93‑1 (MQ=255)
    cATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTATCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAAc                                                                                     <  2:5073753/93‑1 (MQ=255)
     aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg                                                                                    >  1:3865095/1‑93 (MQ=255)
     aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg                                                                                    <  2:4188296/93‑1 (MQ=255)
     aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg                                                                                    >  2:3114239/1‑93 (MQ=255)
      tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg                                                                                   >  2:5417466/1‑93 (MQ=255)
      tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg                                                                                   >  2:2923141/1‑93 (MQ=255)
        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 >  2:3045933/1‑93 (MQ=255)
        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 >  1:5211248/1‑93 (MQ=255)
        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 >  1:5712813/1‑93 (MQ=255)
          tttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGtata                                                                               >  1:1910123/1‑93 (MQ=255)
           ttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaa                                                                              <  2:5956362/93‑1 (MQ=255)
             aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa                                                                            >  1:1633346/1‑93 (MQ=255)
               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                          <  2:1630515/93‑1 (MQ=255)
               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                          <  1:1185621/93‑1 (MQ=255)
               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                          <  1:2660477/93‑1 (MQ=255)
                 gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg                                                                        >  2:5788474/1‑93 (MQ=255)
                 gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg                                                                        <  1:289865/93‑1 (MQ=255)
                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct                                                                      <  1:4115413/93‑1 (MQ=255)
                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGAGTCGCCAGGCTTAACGGTATAAAActggct                                                                      >  2:6000800/1‑93 (MQ=255)
                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg                                                                     <  2:2182990/93‑1 (MQ=255)
                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg                                                                     >  2:64504/1‑93 (MQ=255)
                     cGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctgg                                                                    <  2:5116005/93‑1 (MQ=255)
                      gAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACtggctggc                                                                   >  1:1386916/1‑93 (MQ=255)
                        aGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAg                                                                 >  1:3108878/1‑93 (MQ=255)
                         gATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGt                                                                <  2:697269/93‑1 (MQ=255)
                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                               <  2:3948850/93‑1 (MQ=255)
                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              >  2:3825705/1‑93 (MQ=255)
                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              <  1:5248497/93‑1 (MQ=255)
                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAAAGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              >  1:4437585/1‑93 (MQ=255)
                            tttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGc                                                             >  1:5982632/1‑93 (MQ=255)
                             ttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCt                                                            >  1:3526695/1‑93 (MQ=255)
                              tATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTg                                                           <  2:61821/93‑1 (MQ=255)
                               aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg                                                          >  1:2428739/1‑93 (MQ=255)
                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg                                                         >  1:4157671/1‑92 (MQ=255)
                                  gTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgt                                                       >  1:2167200/1‑93 (MQ=255)
                                   tACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgtg                                                      >  2:1234849/1‑92 (MQ=255)
                                    aCAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCg                                                     >  2:2498699/1‑93 (MQ=255)
                                     cAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGc                                                    >  2:5542901/1‑93 (MQ=255)
                                      aGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGcc                                                   >  2:4705536/1‑93 (MQ=255)
                                      aGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGcc                                                   <  2:5366971/93‑1 (MQ=255)
                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                  >  1:2495450/1‑93 (MQ=255)
                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                  >  2:4418136/1‑93 (MQ=255)
                                       gATTAGCGATACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                  >  2:6133723/1‑93 (MQ=255)
                                        aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCGGGTGTCGCCGt                                                 >  1:1282005/1‑93 (MQ=255)
                                          tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGttt                                               <  2:3104958/93‑1 (MQ=255)
                                          tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGttt                                               <  1:4244640/93‑1 (MQ=255)
                                              gTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAc                                           >  1:2963992/1‑93 (MQ=255)
                                              gTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAc                                           >  2:3400444/1‑93 (MQ=255)
                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAcc                                          <  2:1107614/93‑1 (MQ=255)
                                                tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                         <  1:6069192/93‑1 (MQ=255)
                                                 aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTg                                        <  2:4346395/93‑1 (MQ=255)
                                                 aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTg                                        <  2:4000431/93‑1 (MQ=255)
                                                 aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAACTg                                        >  1:964936/1‑93 (MQ=255)
                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca                                    <  1:3338115/93‑1 (MQ=255)
                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca                                    <  1:1704665/93‑1 (MQ=255)
                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca                                    >  1:5793668/1‑93 (MQ=255)
                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGCGTCGCCGTTTTCACCTGattc                                    >  2:1855661/1‑91 (MQ=255)
                                                       gACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcatc                                  >  1:4590253/1‑93 (MQ=255)
                                                        aCCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCg                                 >  1:714608/1‑93 (MQ=255)
                                                         ccTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGa                                <  2:3166866/93‑1 (MQ=255)
                                                          cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGGTTTCACCTGATCATCGac                               >  2:80289/1‑93 (MQ=255)
                                                          cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGTTTTCACCTGATCATCGac                               >  2:531572/1‑93 (MQ=255)
                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTTGCCGTTTTCACCTGATCATCGaca                              >  2:2006831/1‑93 (MQ=255)
                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGaca                              <  1:5267335/93‑1 (MQ=255)
                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAACTGATTATCGaga                              >  1:4720868/1‑91 (MQ=255)
                                                             tttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACt                            >  2:5876649/1‑93 (MQ=255)
                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                           <  1:2591227/93‑1 (MQ=255)
                                                                  aaaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCaa                       <  2:2825197/93‑1 (MQ=255)
                                                                   aaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAAt                      <  1:2061888/93‑1 (MQ=255)
                                                                    aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATa                     >  1:496101/1‑93 (MQ=255)
                                                                     tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc                    <  2:2397658/93‑1 (MQ=255)
                                                                     tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc                    <  2:1352758/93‑1 (MQ=255)
                                                                       gctcTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAACg                  >  2:2422962/4‑93 (MQ=255)
                                                                       gCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCg                  <  1:1958046/93‑1 (MQ=255)
                                                                        cACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCgg                 <  2:2691319/93‑1 (MQ=255)
                                                                          cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaa               <  1:2554248/93‑1 (MQ=255)
                                                                          cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaa               >  2:3470656/1‑93 (MQ=255)
                                                                           tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCCTCGACACTGGCAATACCCGaaa              >  2:1025159/1‑93 (MQ=255)
                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata            <  2:73687/93‑1 (MQ=255)
                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata            >  2:1127845/1‑93 (MQ=255)
                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata            <  2:2868772/93‑1 (MQ=255)
                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGGTTTCACCTGATCATCGACACTGGCAATACCGGAAata            >  2:5706433/1‑93 (MQ=255)
                                                                              gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAatat           >  1:5162550/1‑93 (MQ=255)
                                                                              gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAatat           >  1:1025459/1‑93 (MQ=255)
                                                                               agTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATAtt          <  2:4857815/93‑1 (MQ=255)
                                                                                gtgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTc         <  2:2821803/93‑1 (MQ=255)
                                                                                 tgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcc        <  2:5458524/93‑1 (MQ=255)
                                                                                  gtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTccc       <  1:6246463/93‑1 (MQ=255)
                                                                                  gtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTccc       <  2:4279267/93‑1 (MQ=255)
                                                                                   tCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc      <  2:3630727/93‑1 (MQ=255)
                                                                                   gcGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc      <  2:5564358/92‑1 (MQ=255)
                                                                                     gCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAc    >  1:5778320/1‑93 (MQ=255)
                                                                                      ccAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAcc   >  2:2627716/1‑93 (MQ=255)
                                                                                       cAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCg  >  2:1469862/1‑93 (MQ=255)
                                                                                       cAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTACCCACCg  >  1:5908766/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG  >  NC_000913/2794411‑2794590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: