BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,834,144	T→C	L435L (TTA→TTG)	hypF ←	transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,834,144	0	T	C	100.0%	772.7 / NA	241	L435L (TTA→TTG)	hypF	transcriptional regulatory protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/121); total (120/121)

Only 100 of 250 total aligned reads displayed.

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

ttCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCaa                                                                                         <  2:6213566/93‑1 (MQ=255)

   aCGCGCCCACTGTCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGc                                                                                      <  1:859715/93‑1 (MQ=255)

   aCGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGc                                                                                      <  2:5514259/93‑1 (MQ=255)

     gcgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCtt                                                                                    <  1:6008745/93‑1 (MQ=255)

     gcgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCtt                                                                                    <  2:190894/93‑1 (MQ=255)

      cgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTc                                                                                   <  2:6044804/93‑1 (MQ=255)

      cgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTc                                                                                   <  2:1330017/93‑1 (MQ=255)

       gcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTcg                                                                                  >  2:1363294/1‑93 (MQ=255)

         ccACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTcgcg                                                                                >  1:5956814/1‑93 (MQ=255)

            ctggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCa                                                                             >  1:2128221/1‑93 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  1:881577/1‑93 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        <  2:6307853/93‑1 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  2:5365574/1‑93 (MQ=255)

                   gagaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATc                                                                      <  1:5694639/93‑1 (MQ=255)

                    agaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCt                                                                     <  2:2205688/93‑1 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  <  2:1567024/93‑1 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  <  2:780584/93‑1 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  <  1:1978458/93‑1 (MQ=255)

                           gCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGcc                                                              >  1:1889562/1‑93 (MQ=255)

                           gCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGcc                                                              >  2:2559466/1‑93 (MQ=255)

                           gCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGcc                                                              >  2:4840454/1‑93 (MQ=255)

                            cccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCa                                                             >  2:3620295/1‑93 (MQ=255)

                             ccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCAt                                                            >  2:241422/1‑93 (MQ=255)

                             ccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCAt                                                            >  2:5164064/1‑93 (MQ=255)

                              cGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATc                                                           >  2:4596418/1‑93 (MQ=255)

                              cGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATc                                                           >  2:1699816/1‑93 (MQ=255)

                                 aTGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTc                                                        <  1:153190/93‑1 (MQ=255)

                                  tGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCa                                                       >  2:3845178/1‑93 (MQ=255)

                                  tGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCa                                                       >  2:695119/1‑93 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGTGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      <  2:4136798/93‑1 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      >  2:102240/1‑93 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      >  1:295768/1‑93 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      >  2:2739123/1‑93 (MQ=255)

                                    cgcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACt                                                     >  1:1410136/1‑93 (MQ=255)

                                    cgcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACt                                                     >  2:4385532/1‑93 (MQ=255)

                                     gcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACtt                                                    >  2:4680844/1‑93 (MQ=255)

                                       gTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaa                                                  <  2:5443400/93‑1 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  2:2145777/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  2:1937044/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGGAAAATCGTAGATGGTTTGCATCAGGCGCAACGCTTCGCGCCGCTGCATCTGGATGCCGTCGTCACTTaaa                                                 >  2:2302103/1‑93 (MQ=255)

                                         cATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAt                                                >  2:3724516/1‑93 (MQ=255)

                                         cATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAt                                                <  2:910126/93‑1 (MQ=255)

                                         cATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAt                                                <  1:604602/93‑1 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  2:6110673/1‑93 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  1:720115/1‑93 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  1:5127318/1‑93 (MQ=255)

                                            gCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGc                                             >  2:4025145/1‑93 (MQ=255)

                                             cacaACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGcc                                            <  2:3276341/93‑1 (MQ=255)

                                                 aCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGa                                        <  2:2803546/93‑1 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       <  1:3754164/93‑1 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      >  1:5245595/1‑93 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      >  2:2488344/1‑93 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      <  1:1173017/93‑1 (MQ=255)

                                                     aTTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCt                                    <  1:930970/93‑1 (MQ=255)

                                                      ttGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTg                                   >  1:3335978/1‑93 (MQ=255)

                                                      ttGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTg                                   >  1:2337396/1‑93 (MQ=255)

                                                         cGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACt                                >  1:414541/1‑93 (MQ=255)

                                                          ggggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTc                               <  1:2833369/93‑1 (MQ=255)

                                                          ggggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTc                               >  2:29519/1‑93 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  1:6234193/1‑93 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  2:5640406/1‑93 (MQ=255)

                                                                aaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACAcc                         <  1:1664266/93‑1 (MQ=255)

                                                                 aaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCg                        <  2:4953910/93‑1 (MQ=255)

                                                                 aaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCg                        >  2:5991630/1‑93 (MQ=255)

                                                                   tCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCt                      >  1:3158030/1‑93 (MQ=255)

                                                                   tCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCt                      <  2:3147242/93‑1 (MQ=255)

                                                                     gTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTg                    >  1:2317252/1‑93 (MQ=255)

                                                                     gTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTg                    >  2:3647637/1‑93 (MQ=255)

                                                                     gTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTg                    <  2:386399/93‑1 (MQ=255)

                                                                      tAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGt                   <  2:2533463/93‑1 (MQ=255)

                                                                      tAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGt                   >  2:671952/1‑93 (MQ=255)

                                                                       aGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGtt                  >  1:769678/1‑93 (MQ=255)

                                                                       aGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGtt                  <  1:1627149/93‑1 (MQ=255)

                                                                        gATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTc                 >  1:4886428/1‑93 (MQ=255)

                                                                        gATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTc                 <  1:5781163/93‑1 (MQ=255)

                                                                         aTGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCa                <  1:259830/93‑1 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               <  1:1371018/93‑1 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               >  1:3057101/1‑93 (MQ=255)

                                                                           gTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAcc              >  2:3510025/1‑93 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             <  1:4770955/93‑1 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAAAACCGCTTGTTCAAcg             >  1:5027550/1‑93 (MQ=255)

                                                                             tttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcgc            >  1:5876645/1‑93 (MQ=255)

                                                                             tttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcgc            <  1:4466172/93‑1 (MQ=255)

                                                                                gCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTCAATCGCCCAGATGCTGACTCAACCCCGCTTGTTCCCCGCGCa         <  1:3385561/93‑1 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAcc       <  2:2081444/93‑1 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAcc       <  2:627825/93‑1 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAcc       >  1:625099/1‑93 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAcc       >  1:2558349/1‑93 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGCTCACCGCGCAcc       >  1:3876636/1‑93 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      <  1:3976250/93‑1 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  2:3244044/1‑93 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  1:1150018/93‑1 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  2:5889585/93‑1 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  1:4716693/93‑1 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   >  1:18312/1‑93 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   >  1:2086759/1‑93 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   >  2:431258/1‑93 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGACCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   <  1:4442572/93‑1 (MQ=255)

                                                                                       gcgcAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCa  <  1:3574722/93‑1 (MQ=255)

                                                                                       gcgcAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCa  <  1:3688172/93‑1 (MQ=255)

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`