BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,851,044	A→G	T296A (ACG→GCG)	hypD →	HypD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,851,044	0	A	G	100.0%	645.6 / NA	204	T296A (ACG→GCG)	hypD	HypD
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/96); total (108/96)

Only 100 of 210 total aligned reads displayed.

CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG  >  NC_000913/2850955‑2851133

cgcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGgcgc                                                                                        <  2:2238301/93‑1 (MQ=255)

cgcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGgcgc                                                                                        <  1:3511698/93‑1 (MQ=255)

 gcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGcc                                                                                       >  1:5762466/1‑93 (MQ=255)

   aaCAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCgg                                                                                     >  2:5379361/1‑93 (MQ=255)

       ggCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCCGATTa                                                                                 >  1:768954/1‑93 (MQ=255)

        gCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTAt                                                                                <  2:2815992/93‑1 (MQ=255)

         cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc                                                                               <  2:5582879/93‑1 (MQ=255)

         cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc                                                                               <  2:6125263/93‑1 (MQ=255)

           aTTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCaa                                                                             >  2:3767996/1‑93 (MQ=255)

           aTTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCaa                                                                             >  2:2993294/1‑93 (MQ=255)

            ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc                                                                            <  1:667941/93‑1 (MQ=255)

            ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCCGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc                                                                            <  1:4262332/93‑1 (MQ=255)

              gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa                                                                          <  2:3749156/93‑1 (MQ=255)

              gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa                                                                          <  2:5319886/93‑1 (MQ=255)

               ccGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGAt                                                                         <  2:5669065/93‑1 (MQ=255)

                cGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGAtt                                                                        <  1:981973/93‑1 (MQ=255)

                 tatttgtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       <  2:196354/89‑1 (MQ=255)

                 gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       >  2:1558771/1‑93 (MQ=255)

                 gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       <  1:3547533/93‑1 (MQ=255)

                  aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg                                                                      >  1:4627323/1‑93 (MQ=255)

                  aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg                                                                      >  1:3670509/1‑93 (MQ=255)

                  aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGGGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg                                                                      >  1:2075840/1‑93 (MQ=255)

                   tgtgTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGa                                                                     >  2:2478120/1‑93 (MQ=255)

                      gtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGc                                                                  >  2:4810305/1‑93 (MQ=255)

                      gtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGc                                                                  <  2:2320773/93‑1 (MQ=255)

                        tCTGTGTCAACGGCGACAGCGAATGGGGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCg                                                                >  1:755271/1‑93 (MQ=255)

                         cTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGa                                                               >  1:535528/1‑93 (MQ=255)

                           gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg                                                             >  2:206169/1‑93 (MQ=255)

                           gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg                                                             >  1:4126068/1‑93 (MQ=255)

                           gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg                                                             >  2:2404035/1‑93 (MQ=255)

                            tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc                                                            <  1:3752218/93‑1 (MQ=255)

                            tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc                                                            >  2:5863626/1‑93 (MQ=255)

                            tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc                                                            >  1:4321033/1‑93 (MQ=255)

                             gccAACGGCGACAGCGAGTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCTCCGGATTATCAACGATTCGATGCCGAAGca                                                           <  2:1408112/91‑1 (MQ=255)

                              tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac                                                          <  1:4378711/93‑1 (MQ=255)

                              tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac                                                          >  1:2414110/1‑93 (MQ=255)

                              tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac                                                          <  1:1464057/93‑1 (MQ=255)

                               cAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcaca                                                         <  2:3568486/93‑1 (MQ=255)

                                 aCGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAtt                                                       <  2:1562601/93‑1 (MQ=255)

                                   ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc                                                     <  1:5602324/93‑1 (MQ=255)

                                   ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc                                                     <  2:6216490/93‑1 (MQ=255)

                                    gCGACAGCGAATGGCGCGGCTTAGGCGTGATTGACTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACGTTTca                                                    >  2:394862/1‑92 (MQ=255)

                                    gCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTcc                                                    >  2:4003820/1‑93 (MQ=255)

                                    gCGACAGCGAATGGCGCGGCGTAGTCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATCTcc                                                    >  2:4484123/1‑93 (MQ=255)

                                      gACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGc                                                  >  2:3414485/1‑93 (MQ=255)

                                       aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc                                                 >  1:2883428/1‑93 (MQ=255)

                                       aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc                                                 >  1:2699489/1‑93 (MQ=255)

                                       aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc                                                 >  2:1207649/1‑93 (MQ=255)

                                        cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc                                                >  2:2274993/1‑93 (MQ=255)

                                        cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc                                                >  1:2102816/1‑93 (MQ=255)

                                        cAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGccc                                                <  1:2532163/93‑1 (MQ=255)

                                          gCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCgg                                              >  1:539070/1‑93 (MQ=255)

                                            gAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCa                                            <  1:4893331/93‑1 (MQ=255)

                                            gAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCa                                            >  1:213808/1‑93 (MQ=255)

                                             aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc                                           >  2:1519717/1‑93 (MQ=255)

                                             aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc                                           >  2:2169218/1‑93 (MQ=255)

                                             aaTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAc                                           >  1:1996331/1‑93 (MQ=255)

                                              aTGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCAcc                                          <  1:1872188/93‑1 (MQ=255)

                                               tGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCg                                         >  1:2506038/1‑93 (MQ=255)

                                                ggCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgc                                        <  1:6233409/93‑1 (MQ=255)

                                                 gcgcGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgca                                       <  2:1123450/93‑1 (MQ=255)

                                                   gcgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagc                                     <  1:1605726/93‑1 (MQ=255)

                                                   gcgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagc                                     <  1:3802480/93‑1 (MQ=255)

                                                    cgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagca                                    <  2:6045826/93‑1 (MQ=255)

                                                    cgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagca                                    <  1:3239092/93‑1 (MQ=255)

                                                     ggCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGcagcag                                   >  2:2920553/1‑93 (MQ=255)

                                                      gCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAgg                                  >  2:5800188/1‑93 (MQ=255)

                                                       cTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGt                                 >  2:234277/1‑93 (MQ=255)

                                                       cTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGt                                 <  2:371718/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCTCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                <  1:3737511/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                >  2:4202588/1‑93 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                <  2:672696/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                <  1:1551837/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGAACATTTCCGCCCGGCACCGCAGCAGGTc                                >  1:1044317/1‑93 (MQ=255)

                                                          aGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTg                              <  1:1520762/93‑1 (MQ=255)

                                                           ggCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGc                             >  2:756307/1‑93 (MQ=255)

                                                           ggCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGc                             <  2:2952960/93‑1 (MQ=255)

                                                            gCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCCGCACCGCAGCAGGTCTGCg                            >  2:1453619/1‑93 (MQ=255)

                                                             cGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGa                           <  1:3058242/93‑1 (MQ=255)

                                                               tGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATg                         <  2:3171911/93‑1 (MQ=255)

                                                                gATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGa                        <  2:3111721/93‑1 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      <  1:1145108/93‑1 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      <  1:5167999/93‑1 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      >  2:4236891/1‑93 (MQ=255)

                                                                    gAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcg                    >  1:1778372/1‑93 (MQ=255)

                                                                      aTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcg                  <  1:4725359/93‑1 (MQ=255)

                                                                       tcttctGGCGTGCACATGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgc                 <  2:3036973/93‑1 (MQ=255)

                                                                        cttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcg                <  2:2753274/93‑1 (MQ=255)

                                                                            tGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgcgcg            >  1:4591884/1‑93 (MQ=255)

                                                                             ggCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGt           >  1:1575815/1‑93 (MQ=255)

                                                                              gCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGtt          <  1:5684044/93‑1 (MQ=255)

                                                                                gTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtgt        >  1:3505483/1‑93 (MQ=255)

                                                                                   cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt     <  2:4282212/93‑1 (MQ=255)

                                                                                   cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt     <  1:5289263/93‑1 (MQ=255)

                                                                                   cACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggt     >  1:5938333/1‑93 (MQ=255)

                                                                                    aCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg    <  2:4126068/93‑1 (MQ=255)

                                                                                    aCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg    <  1:4038501/93‑1 (MQ=255)

                                                                                     ccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGa   <  2:4627323/93‑1 (MQ=255)

                                                                                     ccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGa   >  2:2580181/1‑93 (MQ=255)

                                                                                      cTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAg  >  2:50882/1‑93 (MQ=255)

CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG  >  NC_000913/2850955‑2851133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`