BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,935,409	T→C	intergenic (+28/‑51)	fucI → / → fucK	L‑fucose isomerase/L‑fuculokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,935,409	0	T	C	100.0%	862.0 / NA	268	intergenic (+28/‑51)	fucI/fucK	L‑fucose isomerase/L‑fuculokinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/138); total (130/138)

Only 100 of 273 total aligned reads displayed.

ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498

 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGc                                                                                        >  2:2427473/1‑93 (MQ=255)

 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGc                                                                                        <  1:4082405/93‑1 (MQ=255)

 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGc                                                                                        >  1:897476/1‑93 (MQ=255)

 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTA‑GGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCt                                                                                       >  1:1706065/1‑93 (MQ=255)

    atatTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTcc                                                                                     >  2:358937/1‑93 (MQ=255)

         gAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTa                                                                                >  2:669433/1‑93 (MQ=255)

         gAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTa                                                                                >  1:5077875/1‑93 (MQ=255)

          aaGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAc                                                                               <  1:4221574/93‑1 (MQ=255)

           aGGCTAGGATTACCGCGCTTGCCAGAACTACGGTCCGTCGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAcc                                                                              <  2:4610670/93‑1 (MQ=255)

           aGGCCAGGATTACCGCGCTTGCCAGACCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAcc                                                                              <  1:2094446/93‑1 (MQ=255)

            ggCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCg                                                                             <  2:3895242/93‑1 (MQ=255)

            ggCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCg                                                                             <  2:2005860/93‑1 (MQ=255)

            ggCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCg                                                                             <  2:3297769/93‑1 (MQ=255)

                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  1:5756350/1‑93 (MQ=255)

                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  1:3265373/1‑93 (MQ=255)

                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  2:1049033/1‑93 (MQ=255)

                  gATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTg                                                                       >  2:1534348/1‑93 (MQ=255)

                   aTTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGa                                                                      <  1:3058523/93‑1 (MQ=255)

                    ttACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGaa                                                                     <  2:4811363/93‑1 (MQ=255)

                      aCCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAca                                                                   >  1:4363461/1‑93 (MQ=255)

                       ccGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaa                                                                  <  1:3692353/93‑1 (MQ=255)

                       ccGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaa                                                                  >  2:3512066/1‑93 (MQ=255)

                        cgcgCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaag                                                                 <  2:4703269/93‑1 (MQ=255)

                           gcTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaa                                                              >  1:261049/1‑93 (MQ=255)

                           gcTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaa                                                              <  1:5329917/93‑1 (MQ=255)

                            cTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaag                                                             <  2:2682957/93‑1 (MQ=255)

                               gCCAGACCTCCGGTCCGTTGTACAAGCGTTAATACATTCCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGt                                                          <  2:1315320/93‑1 (MQ=255)

                               gCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGt                                                          <  1:4578181/93‑1 (MQ=255)

                                ccAGAACTACGGTCCGTGGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTg                                                         <  2:2206624/93‑1 (MQ=255)

                                 cAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGAgg                                                        >  2:4346358/1‑93 (MQ=255)

                                  aGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGt                                                       >  1:2932389/1‑93 (MQ=255)

                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      <  1:272330/93‑1 (MQ=255)

                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      <  2:254959/93‑1 (MQ=255)

                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATAACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      <  1:2237997/93‑1 (MQ=255)

                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  1:5238684/93‑1 (MQ=255)

                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  2:317772/93‑1 (MQ=255)

                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  1:999584/93‑1 (MQ=255)

                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  2:3411342/93‑1 (MQ=255)

                                    aaCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  2:1627332/93‑1 (MQ=255)

                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTat                                                    >  2:425703/1‑92 (MQ=255)

                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    <  2:5471510/93‑1 (MQ=255)

                                      cTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGc                                                   <  2:2047549/93‑1 (MQ=255)

                                        aCGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg                                                 <  2:1572798/93‑1 (MQ=255)

                                        aCGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg                                                 >  2:3028148/1‑93 (MQ=255)

                                        aCGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg                                                 >  1:2695926/1‑93 (MQ=255)

                                          ggTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa                                               <  1:346762/93‑1 (MQ=255)

                                           gTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAt                                              <  1:5953026/93‑1 (MQ=255)

                                           gTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAt                                              <  1:3114720/93‑1 (MQ=255)

                                            tCCTTTGTACAAGCGTTAATACATTACTCCATGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             <  2:6194238/93‑1 (MQ=255)

                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             <  2:4351212/93‑1 (MQ=255)

                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             <  2:1363639/93‑1 (MQ=255)

                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             >  1:2563747/1‑93 (MQ=255)

                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             <  1:2783438/93‑1 (MQ=255)

                                             ccGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa                                            >  2:744116/1‑93 (MQ=255)

                                              cGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAg                                           >  1:2435505/1‑93 (MQ=255)

                                              cGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCCGCTaaa                                           >  1:1432144/1‑92 (MQ=255)

                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc                                          <  2:5284725/93‑1 (MQ=255)

                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc                                          <  2:4072130/93‑1 (MQ=255)

                                                ttGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCa                                         >  2:2364490/1‑93 (MQ=255)

                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGGAATGtt                                    >  2:4890585/1‑93 (MQ=255)

                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt                                    >  2:596319/1‑93 (MQ=255)

                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt                                    >  2:3696565/1‑93 (MQ=255)

                                                      aaGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa                                   >  2:5215581/1‑93 (MQ=255)

                                                      aaGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATATTa                                   >  1:5937171/1‑93 (MQ=255)

                                                       aGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGGAATGTTAt                                  >  1:6268282/1‑93 (MQ=255)

                                                        gCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATc                                 <  2:1632328/93‑1 (MQ=255)

                                                        gCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATc                                 <  2:2920545/93‑1 (MQ=255)

                                                        gCGTGAGTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATc                                 <  1:5509510/93‑1 (MQ=255)

                                                         cGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATcc                                <  1:3416867/93‑1 (MQ=255)

                                                         cGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATcc                                <  1:5177129/93‑1 (MQ=255)

                                                            tAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc                             >  1:1333750/1‑93 (MQ=255)

                                                             aaTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGGCGGATAAGGAATGTTATTCTGCt                            >  2:5773037/1‑93 (MQ=255)

                                                              aTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtt                           >  1:4152401/1‑92 (MQ=255)

                                                              aTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCta                           >  2:4949098/1‑93 (MQ=255)

                                                               tACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATTCGGCtat                          >  1:503463/1‑93 (MQ=255)

                                                               tACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat                          <  2:1841759/93‑1 (MQ=255)

                                                                aCATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata                         >  1:3916373/1‑93 (MQ=255)

                                                                 cATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat                        >  2:4845951/1‑93 (MQ=255)

                                                                  aTTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt                       <  1:602834/93‑1 (MQ=255)

                                                                    tACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGc                     <  2:5144683/93‑1 (MQ=255)

                                                                     aCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa                    <  1:6094497/93‑1 (MQ=255)

                                                                     aCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAGAAGCACTGTTATTCGGCTATATTGCa                    >  2:2106312/1‑93 (MQ=255)

                                                                        cccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa                 <  2:4567186/93‑1 (MQ=255)

                                                                          cTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTTTATTGCAGGAgg               >  2:1282671/1‑92 (MQ=255)

                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGa             <  2:5058436/93‑1 (MQ=255)

                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            >  2:1071560/1‑93 (MQ=255)

                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            <  2:838955/93‑1 (MQ=255)

                                                                             atgtgatgCCCGGCCGCTCCGGCTACCAGGCATGAACAGACAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            <  1:6306722/93‑1 (MQ=255)

                                                                               gtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa          <  1:1523685/93‑1 (MQ=255)

                                                                                tgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATTCGGCTATATTGCAGGAGCGATTAt         >  2:5336989/1‑93 (MQ=255)

                                                                                tgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAt         <  2:1875892/93‑1 (MQ=255)

                                                                                 gatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAta        >  2:5713158/1‑92 (MQ=255)

                                                                                  atgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa       <  2:3097977/93‑1 (MQ=255)

                                                                                  atgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa       <  2:2731742/93‑1 (MQ=255)

                                                                                   tgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaa      >  2:4024330/1‑93 (MQ=255)

                                                                                    gCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa     <  1:1058120/93‑1 (MQ=255)

                                                                                     cccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc    <  2:907219/93‑1 (MQ=255)

                                                                                      ccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa   >  1:492287/1‑93 (MQ=255)

                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  <  1:4412932/93‑1 (MQ=255)

                                                                                       cGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa  <  1:1258646/93‑1 (MQ=255)

ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`