BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,979,391	T→C	T272A (ACC→GCC)	araE ←	low‑affinity L‑arabinose transport system proton symport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,979,391	0	T	C	100.0%	752.4 / NA	232	T272A (ACC→GCC)	araE	low‑affinity L‑arabinose transport system proton symport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/127); total (105/127)

Only 100 of 240 total aligned reads displayed.

CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480

 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATATGCGGCGCGTAGTACATGATGATGTTCATACCGGCaac                                                                                        >  2:5206718/1‑92 (MQ=255)

 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTTATACCGGCaaa                                                                                        >  2:5571832/1‑93 (MQ=255)

 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        >  2:5225480/1‑93 (MQ=255)

 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        >  2:3307557/1‑93 (MQ=255)

  agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       <  1:1579320/93‑1 (MQ=255)

  agagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAc                                                                                       <  1:197938/93‑1 (MQ=255)

   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      >  2:37861/1‑93 (MQ=255)

   gagTCGCAATCATCAGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      >  2:3847971/1‑93 (MQ=255)

    agTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActg                                                                                     <  2:5913656/93‑1 (MQ=255)

     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    <  2:136875/93‑1 (MQ=255)

      tCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATATCGGCAAActgct                                                                                   <  1:3406328/93‑1 (MQ=255)

       cGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgctg                                                                                  >  2:1868847/1‑93 (MQ=255)

        gCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACtgctgc                                                                                 <  1:5908546/93‑1 (MQ=255)

         cAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCa                                                                                >  1:1380781/1‑93 (MQ=255)

          aaTCATCTGTTGTTCTGTGGGCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCac                                                                               >  1:5809806/1‑92 (MQ=255)

           atcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATc                                                                              >  2:398519/1‑93 (MQ=255)

           atcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATc                                                                              <  1:422518/93‑1 (MQ=255)

            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  1:289474/1‑93 (MQ=255)

            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  2:5639875/1‑93 (MQ=255)

               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          <  1:4825154/93‑1 (MQ=255)

               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          >  2:1751758/1‑93 (MQ=255)

               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          >  1:1134791/1‑93 (MQ=255)

                 tgttgtTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCttc                                                                        <  2:6211464/93‑3 (MQ=255)

                 tgttgtTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGc                                                                        <  2:2600559/93‑1 (MQ=255)

                   ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      <  1:3942837/93‑1 (MQ=255)

                   ttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaa                                                                      >  2:3907900/1‑93 (MQ=255)

                    tgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTCGTACATGATGATGTTCATACCGTCAAACTGCTGCATCGCCTGcaac                                                                     <  2:5073157/93‑1 (MQ=255)

                      ttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaacaa                                                                   <  2:2080113/93‑1 (MQ=255)

                        cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  2:4616800/93‑1 (MQ=255)

                        cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  1:4013607/93‑1 (MQ=255)

                         tgtgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAt                                                                <  2:3011078/93‑1 (MQ=255)

                         tgtgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAt                                                                >  2:1929520/1‑93 (MQ=255)

                           tgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAc                                                              <  1:3506435/93‑1 (MQ=255)

                           tgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAc                                                              >  1:5585881/1‑93 (MQ=255)

                            ggTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAcc                                                             <  1:5403775/93‑1 (MQ=255)

                              tCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCga                                                           <  2:5545740/93‑1 (MQ=255)

                                 tAAAGGCCGCCATTTTGAAGATACGCGGCGCGTAGGACATGATGATGTTCATACCGGCAAACTGCTGCATCGCGTGCAACAAAATACCGAGaa                                                        >  1:1888060/1‑93 (MQ=255)

                                 tAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaa                                                        <  1:4063513/93‑1 (MQ=255)

                                 tAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaa                                                        >  1:2286001/1‑93 (MQ=255)

                                  aaaGCCCGCCATTTTGAAGATACGCGGCGTGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaaa                                                       <  2:745831/93‑1 (MQ=255)

                                  aaaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaaa                                                       <  2:306537/93‑1 (MQ=255)

                                  aaaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaaa                                                       <  2:5374142/93‑1 (MQ=255)

                                  aaaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaaa                                                       >  1:3887100/1‑93 (MQ=255)

                                         gCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCa                                                <  2:1535564/93‑1 (MQ=255)

                                          ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               >  1:2846816/1‑93 (MQ=255)

                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              <  1:3236018/93‑1 (MQ=255)

                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:2797893/1‑93 (MQ=255)

                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:4327220/1‑93 (MQ=255)

                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  1:2344149/1‑93 (MQ=255)

                                            aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             <  1:3826690/93‑1 (MQ=255)

                                            aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             <  2:1845040/93‑1 (MQ=255)

                                            aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             <  2:2185218/93‑1 (MQ=255)

                                            aTTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacga                                             <  1:2972914/93‑1 (MQ=255)

                                             ttttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgac                                            <  1:6039209/93‑1 (MQ=255)

                                              tttGAAGATGCGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgacg                                           <  2:2354717/93‑1 (MQ=255)

                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  2:1646449/93‑1 (MQ=255)

                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         <  2:4550725/93‑1 (MQ=255)

                                                  aaGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacggacg                                       >  1:5210395/1‑93 (MQ=255)

                                                  aaGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacggacg                                       >  1:4577854/1‑93 (MQ=255)

                                                   aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      >  1:3403527/1‑93 (MQ=255)

                                                   aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      <  2:2860674/93‑1 (MQ=255)

                                                    gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGtt                                     >  1:2107/1‑93 (MQ=255)

                                                     aTACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTa                                    <  2:1059964/93‑1 (MQ=255)

                                                      tACGCGGCGCGTAGTACATGATGATGTTCATACGGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAc                                   >  2:5281597/1‑93 (MQ=255)

                                                         gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                <  2:930823/93‑1 (MQ=255)

                                                         gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                >  1:292075/1‑93 (MQ=255)

                                                         gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                >  1:4527925/1‑93 (MQ=255)

                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              >  1:1811066/1‑93 (MQ=255)

                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGCTACGGCTg                              >  2:2921230/1‑93 (MQ=255)

                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACAGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              <  1:810258/93‑1 (MQ=255)

                                                             cgcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAt                            <  2:2537750/93‑1 (MQ=255)

                                                               cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          >  1:3559120/1‑93 (MQ=255)

                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  1:5298782/1‑93 (MQ=255)

                                                                   gtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTaaa                      >  1:3020668/1‑93 (MQ=255)

                                                                     aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    >  1:5052829/1‑93 (MQ=255)

                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  <  2:1999049/93‑1 (MQ=255)

                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  <  2:1222371/93‑1 (MQ=255)

                                                                        tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGTACGTTACGGTTGATCTTAAACAGTg                 >  1:475018/1‑93 (MQ=255)

                                                                        tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTg                 >  1:2871344/1‑93 (MQ=255)

                                                                        tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTg                 >  2:470613/1‑93 (MQ=255)

                                                                          atgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGcc               <  1:6188025/93‑1 (MQ=255)

                                                                           tgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGccc              <  1:5279165/93‑1 (MQ=255)

                                                                           tgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGccc              >  1:2352712/1‑93 (MQ=255)

                                                                            gatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCa             >  2:4462475/1‑93 (MQ=255)

                                                                            gatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCa             >  2:3200478/1‑93 (MQ=255)

                                                                             atgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCaa            >  2:148197/1‑93 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCCCGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  1:4351917/93‑1 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  2:4243383/93‑1 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           >  2:4998753/1‑93 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  2:5864393/93‑1 (MQ=255)

                                                                               gTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAcc          <  2:3575074/93‑1 (MQ=255)

                                                                                ttCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCg         >  1:1062533/1‑93 (MQ=255)

                                                                                   aTACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      <  2:2779301/93‑1 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     <  1:1258777/93‑1 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     <  2:276366/93‑1 (MQ=255)

                                                                                     aCCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTg    <  1:1090348/93‑1 (MQ=255)

                                                                                      ccGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGt   <  2:242989/93‑1 (MQ=255)

                                                                                       cGGCAAACTTCCACATCGCCTGCAACAACAAACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  2:743164/93‑1 (MQ=255)

                                                                                       cGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  2:917553/93‑1 (MQ=255)

                                                                                       cGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACAGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  2:4098211/93‑1 (MQ=255)

CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`