BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	332,019	T→C	V142A (GTG→GCG)	yahA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	332,019	0	T	C	100.0%	731.8 / NA	227	V142A (GTG→GCG)	yahA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/115); total (112/115)

Only 100 of 239 total aligned reads displayed.

CCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAA  >  NC_000913/331929‑332108

ccATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGgcgc                                                                                         <  2:1362063/93‑1 (MQ=255)

 cATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCt                                                                                        >  1:1300194/1‑93 (MQ=255)

 cATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCt                                                                                        >  1:992485/1‑93 (MQ=255)

 cATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCt                                                                                        >  2:4067522/1‑93 (MQ=255)

  aTCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCtt                                                                                       <  1:1222722/93‑1 (MQ=255)

  aTCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCtt                                                                                       <  2:2881003/93‑1 (MQ=255)

   tCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTg                                                                                      >  2:2296812/1‑93 (MQ=255)

    cAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGt                                                                                     <  2:5554706/93‑1 (MQ=255)

     aGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTc                                                                                    <  2:5489009/93‑1 (MQ=255)

     aGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTc                                                                                    <  1:4014468/93‑1 (MQ=255)

     aGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTc                                                                                    <  1:139003/93‑1 (MQ=255)

      gTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTcc                                                                                   <  1:2245534/93‑1 (MQ=255)

      gTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTcc                                                                                   <  2:6112793/93‑1 (MQ=255)

          ggCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTg                                                                               <  2:5279681/93‑1 (MQ=255)

           gCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTgg                                                                              <  1:4489003/93‑1 (MQ=255)

           gCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTgg                                                                              <  1:705377/93‑1 (MQ=255)

           gCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTgg                                                                              <  2:4565315/93‑1 (MQ=255)

            cGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTggg                                                                             <  1:3890204/93‑1 (MQ=255)

              ttGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGaa                                                                           >  2:5162202/1‑93 (MQ=255)

              ttGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGaa                                                                           >  2:4339843/1‑93 (MQ=255)

               tGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAAc                                                                          >  2:4884408/1‑93 (MQ=255)

                ggAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACa                                                                         >  2:1105304/1‑93 (MQ=255)

                ggAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACa                                                                         >  1:3596356/1‑93 (MQ=255)

                ggAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCCGGGAACa                                                                         >  1:3444118/1‑93 (MQ=255)

                  aaaaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATc                                                                       <  2:5715796/93‑1 (MQ=255)

                  aaaaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATc                                                                       >  1:1307335/1‑93 (MQ=255)

                   aaaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATcc                                                                      >  1:4978646/1‑93 (MQ=255)

                    aaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCca                                                                     <  2:5950865/93‑1 (MQ=255)

                     aCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCcac                                                                    >  1:4685040/1‑93 (MQ=255)

                      ccACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCcaca                                                                   <  2:2077912/93‑1 (MQ=255)

                      ccACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCcaca                                                                   <  2:5360728/93‑1 (MQ=255)

                       cACGAATTCAAACCGCGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaa                                                                  >  2:3888053/1‑93 (MQ=255)

                          gAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACg                                                               >  2:5071402/1‑93 (MQ=255)

                          gAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACg                                                               <  1:1029236/93‑1 (MQ=255)

                           aaTTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAAAgg                                                              >  1:4520401/1‑93 (MQ=255)

                            aTTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACggg                                                             <  2:3371668/93‑1 (MQ=255)

                            aTTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACggg                                                             >  2:481144/1‑93 (MQ=255)

                             ttCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGa                                                            <  2:4726187/93‑1 (MQ=255)

                               cAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAAt                                                          <  1:1809033/93‑1 (MQ=255)

                                aacccGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTTTGATGGGTACATACACAAACGGGAAtt                                                         >  2:4251938/4‑93 (MQ=255)

                                aaaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAAtt                                                         <  2:3236735/93‑1 (MQ=255)

                                aaaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAAtt                                                         >  2:4412747/1‑93 (MQ=255)

                                aaaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAAtt                                                         <  2:6285008/93‑1 (MQ=255)

                                 aaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTa                                                        <  1:2461812/93‑1 (MQ=255)

                                  aCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTAt                                                       >  1:6265992/1‑93 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     <  1:837136/93‑1 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     <  1:317665/93‑1 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     >  2:5871376/1‑93 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     <  2:826949/93‑1 (MQ=255)

                                      tGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCa                                                   <  1:1878708/93‑1 (MQ=255)

                                       ggATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCAc                                                  <  2:5821997/93‑1 (MQ=255)

                                       ggATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCAc                                                  >  2:3201114/1‑93 (MQ=255)

                                         aTCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCg                                                >  1:2354410/1‑93 (MQ=255)

                                         aTCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCg                                                <  2:5618757/93‑1 (MQ=255)

                                         aTCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCg                                                <  1:5057286/93‑1 (MQ=255)

                                          tCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCgg                                               >  1:2077186/1‑93 (MQ=255)

                                          tCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCgg                                               >  1:5778674/1‑93 (MQ=255)

                                            cAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGAt                                             >  2:2546855/1‑93 (MQ=255)

                                             aaCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATc                                            >  2:4535891/1‑93 (MQ=255)

                                              aCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCa                                           <  1:4892717/93‑1 (MQ=255)

                                               ccGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAg                                          <  1:2595271/93‑1 (MQ=255)

                                                cGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGt                                         >  2:3643725/1‑93 (MQ=255)

                                                 ggTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAggt                                        >  1:5514288/1‑91 (MQ=255)

                                                 ggTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGtt                                        >  1:4786238/1‑93 (MQ=255)

                                                 ggTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGtt                                        <  2:6022962/93‑1 (MQ=255)

                                                  gTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCCCCGGATCAGttt                                       >  2:149906/1‑93 (MQ=255)

                                                   ttttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTa                                      >  1:2277926/1‑93 (MQ=255)

                                                    tttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTAt                                     <  1:6004801/93‑1 (MQ=255)

                                                    tttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTAt                                     <  1:517806/93‑1 (MQ=255)

                                                     ttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTAtt                                    >  1:1748125/1‑93 (MQ=255)

                                                     ttCTGCGCGCAGACTGGCCTACTGACGGTCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTAtt                                    <  1:2763540/93‑1 (MQ=255)

                                                      tCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTc                                   <  2:578319/93‑1 (MQ=255)

                                                        tGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCct                                 >  1:286395/1‑93 (MQ=255)

                                                          cgcgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCctct                               <  2:2982715/93‑1 (MQ=255)

                                                          cacgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCctct                               <  2:2635570/91‑1 (MQ=255)

                                                           gcgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTg                              >  2:1323960/1‑93 (MQ=255)

                                                           gcgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTg                              >  1:1527363/1‑93 (MQ=255)

                                                             gcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGc                            >  2:3600258/1‑93 (MQ=255)

                                                             gcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGc                            <  1:3731829/93‑1 (MQ=255)

                                                             gcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGc                            <  1:5390772/93‑1 (MQ=255)

                                                              cAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCg                           <  1:1820208/93‑1 (MQ=255)

                                                                gACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACACACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCggg                         >  2:1667867/1‑92 (MQ=255)

                                                                gACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGa                         <  1:5240540/93‑1 (MQ=255)

                                                                  cTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGt                       >  1:3484851/1‑93 (MQ=255)

                                                                   tGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTc                      >  1:4234059/1‑93 (MQ=255)

                                                                    ggCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCa                     >  1:2961801/1‑93 (MQ=255)

                                                                    ggCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCa                     >  1:5561900/1‑93 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAGCGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  1:1151661/93‑1 (MQ=255)

                                                                        tACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCg                 >  1:4729357/1‑93 (MQ=255)

                                                                        tACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCg                 <  1:3923386/93‑1 (MQ=255)

                                                                        tACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCg                 <  1:3394395/93‑1 (MQ=255)

                                                                         aCTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCgg                >  1:594412/1‑93 (MQ=255)

                                                                            gACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGGCATCCAGTCt             >  2:911414/1‑93 (MQ=255)

                                                                               gggCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTAt          >  1:4177403/1‑93 (MQ=255)

                                                                                ggCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTAtt         <  2:4019402/93‑1 (MQ=255)

                                                                                ggCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTAtt         <  2:179127/93‑1 (MQ=255)

                                                                                   tgtgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTc      <  2:4666317/93‑1 (MQ=255)

                                                                                    gtgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCa     <  2:3961581/93‑1 (MQ=255)

                                                                                    gtgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCa     <  2:2115191/93‑1 (MQ=255)

                                                                                      gAGGCGCTTGTCCGCTGGGAACATCCACAATCGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATa   <  2:2714392/93‑1 (MQ=255)

CCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAA  >  NC_000913/331929‑332108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`