BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,988,244	T→C	T51A (ACA→GCA)	yqeK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,988,244	0	T	C	100.0%	845.3 / NA	259	T51A (ACA→GCA)	yqeK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (133/126); total (133/126)

Only 100 of 263 total aligned reads displayed.

TGACAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGTCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAA  >  NC_000913/2988154‑2988333

tGACAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGccc                                                                                         <  1:1201578/93‑1 (MQ=255)

tGACAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGccc                                                                                         <  1:3920084/93‑1 (MQ=255)

 gACAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCa                                                                                        <  2:4303674/93‑1 (MQ=255)

   cAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGCTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCatg                                                                                      >  1:5961936/1‑93 (MQ=255)

    aGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCatga                                                                                     <  1:1880908/93‑1 (MQ=255)

    aGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCatga                                                                                     <  1:3407224/93‑1 (MQ=255)

     gATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCatgat                                                                                    >  2:4371352/1‑93 (MQ=255)

      aTCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCatgatg                                                                                   <  2:538277/93‑1 (MQ=255)

       tCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGAtgt                                                                                  <  1:5579135/93‑1 (MQ=255)

          tGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGAtgttgt                                                                               >  1:5697545/1‑93 (MQ=255)

          tGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGAtgttgt                                                                               <  1:4101284/93‑1 (MQ=255)

            atatatAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGttt                                                                             <  1:4690968/91‑1 (MQ=255)

             gaTATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTg                                                                            >  1:962875/1‑93 (MQ=255)

             gaTATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTg                                                                            >  2:4901604/1‑93 (MQ=255)

             gaTATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTg                                                                            >  2:1117555/1‑93 (MQ=255)

              atatAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGc                                                                           <  1:4861704/93‑1 (MQ=255)

               tataACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCg                                                                          >  1:3071693/1‑93 (MQ=255)

               tataACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCg                                                                          >  1:4531874/1‑93 (MQ=255)

                ataACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGt                                                                         >  1:3171442/1‑93 (MQ=255)

                ataACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGt                                                                         <  2:6251663/93‑1 (MQ=255)

                 taACTGTTTTTAACTTTTCTCTTTACGTGCACTATATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTg                                                                        <  1:3089419/93‑1 (MQ=255)

                 taACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTg                                                                        >  2:2362089/1‑93 (MQ=255)

                 taACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTg                                                                        >  2:250228/1‑93 (MQ=255)

                  aaCTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTga                                                                       >  1:1749366/1‑93 (MQ=255)

                  aaCTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTga                                                                       <  2:76395/93‑1 (MQ=255)

                     tGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGaa                                                                    >  2:5290681/1‑93 (MQ=255)

                      gTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAAc                                                                   >  2:1059823/1‑93 (MQ=255)

                      gTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAAc                                                                   <  1:744758/93‑1 (MQ=255)

                      gTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAAc                                                                   <  1:332228/93‑1 (MQ=255)

                      gTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAAc                                                                   <  1:4797170/93‑1 (MQ=255)

                      gTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAAc                                                                   >  2:1813316/1‑93 (MQ=255)

                       tttttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACa                                                                  >  2:3161948/1‑93 (MQ=255)

                       tttttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACa                                                                  <  1:6053001/93‑1 (MQ=255)

                       tttttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACa                                                                  >  1:1908187/1‑93 (MQ=255)

                        ttttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACAt                                                                 <  2:2047534/93‑1 (MQ=255)

                        ttttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACAt                                                                 <  1:2572728/93‑1 (MQ=255)

                          ttAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATtc                                                               <  2:5079273/93‑1 (MQ=255)

                            aaCTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATtctc                                                             <  2:1612199/93‑1 (MQ=255)

                            aaCTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATtctc                                                             <  2:5738101/93‑1 (MQ=255)

                              cTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAg                                                           <  2:2878272/93‑1 (MQ=255)

                              cTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAg                                                           >  2:4135642/1‑93 (MQ=255)

                               tttACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGc                                                          >  1:2853415/1‑93 (MQ=255)

                                ttACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCa                                                         <  1:2012409/93‑1 (MQ=255)

                                ttACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCa                                                         <  1:3764987/93‑1 (MQ=255)

                                 tACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCAt                                                        >  2:1891431/1‑93 (MQ=255)

                                 tACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCAt                                                        <  1:3382902/93‑1 (MQ=255)

                                 tACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCAt                                                        <  2:6288986/93‑1 (MQ=255)

                                 tACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCAt                                                        >  2:4467271/1‑93 (MQ=255)

                                 tACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCAt                                                        <  1:5497564/93‑1 (MQ=255)

                                    tctTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTaa                                                     <  2:5656015/93‑1 (MQ=255)

                                     ctTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAg                                                    <  2:6150532/93‑1 (MQ=255)

                                       ttACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGa                                                  >  1:6172148/1‑93 (MQ=255)

                                       ttACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGa                                                  <  1:1530630/93‑1 (MQ=255)

                                        tACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGaa                                                 <  2:213420/93‑1 (MQ=255)

                                         aCGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAAt                                                <  2:4725330/93‑1 (MQ=255)

                                            ttGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAAtttt                                             >  1:1281276/1‑93 (MQ=255)

                                             tGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAAttttt                                            >  2:5958999/1‑93 (MQ=255)

                                              gACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAAtttttt                                           >  1:2338490/1‑93 (MQ=255)

                                                cTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTa                                         <  1:1388412/93‑1 (MQ=255)

                                                cTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTa                                         <  1:2644111/93‑1 (MQ=255)

                                                 tttATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTaa                                        >  1:5393771/1‑93 (MQ=255)

                                                 tttATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTa                                         >  1:2485370/1‑92 (MQ=255)

                                                  ttATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAAc                                       <  1:1725321/93‑1 (MQ=255)

                                                   tATTGACAGAGTTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGAGAGAACATTCTCAGCATTAAGGAATTTTTTTAACg                                      <  1:6298125/93‑1 (MQ=255)

                                                   tATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACg                                      >  2:1524743/1‑93 (MQ=255)

                                                   tATTGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACg                                      >  1:2402723/1‑93 (MQ=255)

                                                     ttGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGa                                    <  2:5418621/93‑1 (MQ=255)

                                                     ttGACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGa                                    >  2:3713112/1‑93 (MQ=255)

                                                       gACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGTGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAAt                                  <  2:4281255/93‑1 (MQ=255)

                                                       gACAGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAAt                                  <  2:3870859/93‑1 (MQ=255)

                                                          aGAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCt                               <  1:1158831/93‑1 (MQ=255)

                                                           gAATTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCtt                              >  1:5291968/1‑93 (MQ=255)

                                                            aaTTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTg                             >  1:4078243/1‑93 (MQ=255)

                                                             aTTAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTgg                            >  2:2274574/1‑93 (MQ=255)

                                                              ttAACATTCACATAGCGTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGt                           <  2:1257059/93‑1 (MQ=255)

                                                               tAACATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGtt                          >  1:513474/1‑93 (MQ=255)

                                                                 aCATTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTc                        >  1:3827969/1‑93 (MQ=255)

                                                                   aTTCACATATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCtt                      <  2:399387/93‑1 (MQ=255)

                                                                     tCACATATCTTGAATTTAATACCTGTGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTAAACGGAATCCTTGGTTTCtttt                    <  2:940329/93‑1 (MQ=255)

                                                                      cacaTATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCttttt                   <  1:2285854/93‑1 (MQ=255)

                                                                       acaTATCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTc                  >  2:4235187/1‑93 (MQ=255)

                                                                         atatCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGa                <  1:4222947/93‑1 (MQ=255)

                                                                          tatCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAg               >  2:2751578/1‑93 (MQ=255)

                                                                           agcTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGt              <  2:503010/91‑1 (MQ=255)

                                                                            tCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTc             <  1:5912103/93‑1 (MQ=255)

                                                                            tCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTc             <  1:1677205/93‑1 (MQ=255)

                                                                            tCTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTc             <  1:5076895/93‑1 (MQ=255)

                                                                             cTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTcc            >  2:5790827/1‑93 (MQ=255)

                                                                             cTTGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTcc            <  2:6027691/93‑1 (MQ=255)

                                                                              ttGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCg           >  1:5759504/1‑93 (MQ=255)

                                                                              ttGAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCg           >  1:52131/1‑93 (MQ=255)

                                                                                gAATTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGaa         >  2:1444639/1‑93 (MQ=255)

                                                                                 aaTTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAAt        <  2:3639575/93‑1 (MQ=255)

                                                                                 aaTTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAAt        <  2:2906563/93‑1 (MQ=255)

                                                                                  aTTTAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAAtt       >  2:4533539/1‑93 (MQ=255)

                                                                                   tttAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAAttt      <  1:4992935/93‑1 (MQ=255)

                                                                                   tttAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAAttt      >  2:856965/1‑93 (MQ=255)

                                                                                    ttAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGCATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTa     >  2:1933051/1‑93 (MQ=255)

                                                                                     tAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTAc    <  2:1363522/93‑1 (MQ=255)

                                                                                     tAATGCCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTAc    >  2:823352/1‑93 (MQ=255)

TGACAGATCGTGAGATATAACTGTTTTTAACTTTACTCTTTACGTTGACTTTATTGACAGAATTAACATTCACATATCTTGAATTTAATGTCCATGATGTTGTTTGCGTGAGAACATTCTCAGCATTAAGGAATTTTTTTAACGGAATCCTTGGTTTCTTTTTCGAGTCCGAATTTACAA  >  NC_000913/2988154‑2988333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`