BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,991,845	T→C	N62N (AAT→AAC)	b2853 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,991,845	0	T	C	100.0%	743.3 / NA	226	N62N (AAT→AAC)	b2853	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/120); total (106/120)

Only 100 of 229 total aligned reads displayed.

CACCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAATCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGTTCCTTT  >  NC_000913/2991755‑2991934

cacCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAAccc                                                                                         <  1:4464966/93‑1 (MQ=255)

cacCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAAccc                                                                                         >  2:5236461/1‑93 (MQ=255)

  ccAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTa                                                                                       >  2:2962158/1‑93 (MQ=255)

   cAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTAt                                                                                      <  2:2168110/93‑1 (MQ=255)

   cAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTAt                                                                                      <  2:5894458/93‑1 (MQ=255)

     gTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTAtct                                                                                    >  2:1694295/1‑93 (MQ=255)

      tGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTAtctc                                                                                   >  1:4975188/1‑93 (MQ=255)

         tACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCAcc                                                                                <  2:3693469/93‑1 (MQ=255)

          aCTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCt                                                                               >  1:4227977/1‑93 (MQ=255)

          aCTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCt                                                                               >  1:1515830/1‑93 (MQ=255)

            tGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTa                                                                             <  2:456936/93‑1 (MQ=255)

             gATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTAc                                                                            >  1:4848540/1‑93 (MQ=255)

              aTACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACt                                                                           >  1:5907067/1‑93 (MQ=255)

                aCAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACtat                                                                         >  1:5124470/1‑93 (MQ=255)

                aCAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACtat                                                                         >  2:4834500/1‑93 (MQ=255)

                aCAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACtat                                                                         <  2:5683551/93‑1 (MQ=255)

                 cAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACtata                                                                        <  1:1546252/93‑1 (MQ=255)

                 cAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACtata                                                                        >  2:4406132/1‑93 (MQ=255)

                   gATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATaaa                                                                      >  2:1740844/1‑93 (MQ=255)

                       aaaTACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTg                                                                  >  1:1624260/1‑93 (MQ=255)

                        aaTACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGa                                                                 >  2:2753697/1‑93 (MQ=255)

                        aaTACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGa                                                                 >  2:5772285/1‑93 (MQ=255)

                         aTACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAg                                                                <  1:1835651/93‑1 (MQ=255)

                          tACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGt                                                               <  1:942011/93‑1 (MQ=255)

                          tACAAGCATTTAAAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGt                                                               >  2:2498608/1‑93 (MQ=255)

                           aCAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTg                                                              <  1:917780/93‑1 (MQ=255)

                            cAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTgg                                                             >  2:3425462/1‑93 (MQ=255)

                             aaGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGt                                                            <  2:6046886/93‑1 (MQ=255)

                             aaGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGt                                                            <  1:4303017/93‑1 (MQ=255)

                             aaGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGt                                                            >  1:3293447/1‑93 (MQ=255)

                              aGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTa                                                           <  2:1936290/93‑1 (MQ=255)

                              aGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTa                                                           >  2:5140103/1‑93 (MQ=255)

                               gCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAg                                                          <  1:4018947/93‑1 (MQ=255)

                               gCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAg                                                          >  2:49729/1‑93 (MQ=255)

                                cATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGa                                                         >  2:2876873/1‑93 (MQ=255)

                                cATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGa                                                         <  1:5175922/93‑1 (MQ=255)

                                 aTTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGAc                                                        <  2:5412633/93‑1 (MQ=255)

                                 aTTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGAc                                                        >  1:2232768/1‑93 (MQ=255)

                                 aTTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAACTGAGTGGTAGAc                                                        <  2:5043105/93‑1 (MQ=255)

                                  tttATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACg                                                       >  1:1452670/1‑93 (MQ=255)

                                   ttATAGTTTCAACATGGATGGCGGCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGa                                                      >  2:4647495/1‑93 (MQ=255)

                                    tataGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGAt                                                     >  2:6242322/1‑93 (MQ=255)

                                    tataGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGAt                                                     >  1:4534052/1‑93 (MQ=255)

                                      taGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTg                                                   >  1:264745/1‑93 (MQ=255)

                                        gTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGAc                                                 <  1:5271017/93‑1 (MQ=255)

                                            cAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaa                                             <  1:2268913/93‑1 (MQ=255)

                                             aaCATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaat                                            <  1:658943/93‑1 (MQ=255)

                                             aaCATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaat                                            >  2:558665/1‑93 (MQ=255)

                                               cATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTTAGTGGTAGACGATTGACCaaataa                                          >  1:4742467/1‑93 (MQ=255)

                                               cATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaataa                                          >  2:3257222/1‑93 (MQ=255)

                                               cATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaataa                                          >  2:4726772/1‑93 (MQ=255)

                                                atggatggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaataaa                                         <  2:2545940/93‑1 (MQ=255)

                                                atggaaggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaataaa                                         <  1:1186842/93‑1 (MQ=255)

                                                 tggatggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCaaataaat                                        <  1:356574/93‑1 (MQ=255)

                                                  ggatggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATc                                       <  2:5332809/93‑1 (MQ=255)

                                                  ggatggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATc                                       <  1:6123930/93‑1 (MQ=255)

                                                   gatggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCa                                      <  1:2890330/93‑1 (MQ=255)

                                                    atggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCAt                                     <  2:635/93‑1 (MQ=255)

                                                      ggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATaa                                   <  1:382266/93‑1 (MQ=255)

                                                      ggCGCCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATaa                                   >  2:1294574/1‑93 (MQ=255)

                                                       gcgcCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAAc                                  >  1:755042/1‑93 (MQ=255)

                                                       gcgcCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAAc                                  <  2:4042135/93‑1 (MQ=255)

                                                         gcCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACga                                >  2:4868152/1‑93 (MQ=255)

                                                         gcCTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACga                                >  2:3575792/1‑93 (MQ=255)

                                                          ccTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACgag                               >  2:3812679/1‑93 (MQ=255)

                                                          ccTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACgag                               >  1:5485946/1‑93 (MQ=255)

                                                           cTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACgaga                              >  1:2391835/1‑93 (MQ=255)

                                                           cTTTTCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACgaga                              >  2:2370780/1‑93 (MQ=255)

                                                            ttttCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGAt                             >  2:265708/1‑93 (MQ=255)

                                                             tttCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATa                            <  1:1967667/93‑1 (MQ=255)

                                                             tttCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATa                            >  1:2588806/1‑93 (MQ=255)

                                                              ttCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATAc                           <  2:1118266/93‑1 (MQ=255)

                                                              ttCAAAATGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATAc                           >  1:5383518/1‑93 (MQ=255)

                                                                 aaaaTGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACttt                        <  1:28372/93‑1 (MQ=255)

                                                                    aTGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTtat                     >  2:5617688/1‑93 (MQ=255)

                                                                    aTGATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTtat                     >  1:5043051/1‑93 (MQ=255)

                                                                     tGATATGTATGCAGAAGATAACCCTATCTCGCCTGACTATAAAATTGAGTTGTAGACGATTGACCAAATAAATCATAACGAGATACTTTtata                    <  2:3960422/93‑1 (MQ=255)

                                                                      gATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataa                   >  1:3173008/1‑93 (MQ=255)

                                                                      gATATGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataa                   <  2:3074689/93‑1 (MQ=255)

                                                                       atatGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataat                  <  2:1536720/93‑1 (MQ=255)

                                                                        tatGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataata                 <  2:1449919/93‑1 (MQ=255)

                                                                        tatGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataata                 <  1:4498288/93‑1 (MQ=255)

                                                                        tatGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTataata                 <  1:4070116/93‑1 (MQ=255)

                                                                         atGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAg                <  2:5359723/93‑1 (MQ=255)

                                                                         atGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAg                <  2:4296902/93‑1 (MQ=255)

                                                                         atGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAg                <  2:4233150/93‑1 (MQ=255)

                                                                          tGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGt               <  2:3933780/93‑1 (MQ=255)

                                                                          tGTATTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGt               >  1:6110282/1‑93 (MQ=255)

                                                                             aTTCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTAtc            <  2:2232768/93‑1 (MQ=255)

                                                                              ttCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTAtct           >  1:1685996/1‑93 (MQ=255)

                                                                              ttCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTAtct           <  2:1181160/93‑1 (MQ=255)

                                                                              atCAGAAGATAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTAtct           >  2:829480/2‑93 (MQ=255)

                                                                                 agaagaTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGt        >  1:3118164/1‑93 (MQ=255)

                                                                                 agaagaTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGt        <  1:6200915/93‑1 (MQ=255)

                                                                                 agaagaTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGt        <  1:1093082/93‑1 (MQ=255)

                                                                                  gaagaTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGtt       >  2:3164599/1‑93 (MQ=255)

                                                                                  gaagaTAACCCGATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGtt       <  2:3876717/93‑1 (MQ=255)

                                                                                    agaTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGTTcc     <  2:3137900/93‑1 (MQ=255)

                                                                                      aTAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGTTCCtt   <  2:3936760/93‑1 (MQ=255)

                                                                                       tAACCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGTTCCttt  <  2:5629717/93‑1 (MQ=255)

CACCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAATCCTATCTCACCTTACTATAAAATTGAGTGGTAGACGATTGACCAAATAAATCATAACGAGATACTTTTATAATAGTATCTCGTTCCTTT  >  NC_000913/2991755‑2991934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`