BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,008,642	C→T	A198A (GCC→GCT)	b2873 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,008,642	0	C	T	100.0%	858.4 / NA	230	A198A (GCC→GCT)	b2873	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (98/132); total (98/132)

Only 100 of 235 total aligned reads displayed.

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCAC  >  NC_000913/3008552‑3008730

aTTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATcgctgc                                                                                        <  2:1753763/93‑1 (MQ=255)

 ttACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCa                                                                                       >  1:4511941/1‑93 (MQ=255)

     gccgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGt                                                                                   >  1:964009/1‑93 (MQ=255)

     gccgcTTGCATGAATCCGGCGCGCCGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGt                                                                                   <  2:2370807/93‑1 (MQ=255)

      ccgcTTGCTTGAATCCGGCGCGCTGACCACCGTGCACCCGGAAGATGATGCGGCTATCGCCAGCAAACGGGCGGAATTTATCGCTGCAGGGtt                                                                                  <  2:6296818/93‑1 (MQ=255)

      ccgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGtt                                                                                  <  1:4691125/93‑1 (MQ=255)

       cgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTa                                                                                 >  1:4108667/1‑93 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                >  2:4011634/1‑93 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                >  2:3910351/1‑93 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                               <  1:3411958/93‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                               >  2:1308180/1‑93 (MQ=255)

          ttGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAcc                                                                              <  1:1010732/93‑1 (MQ=255)

          ttGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAcc                                                                              >  2:2815024/1‑93 (MQ=255)

            gCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgc                                                                            >  1:3238813/1‑93 (MQ=255)

             cATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcg                                                                           >  1:4852804/1‑93 (MQ=255)

              aTGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTTCAGGGTTAAccgcgc                                                                          >  1:5558567/1‑93 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgcc                                                                         >  2:3378409/1‑93 (MQ=255)

                  aTCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgccgcg                                                                      >  2:3991614/1‑93 (MQ=255)

                   tCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACcgcgccgcgc                                                                     <  2:6049408/93‑1 (MQ=255)

                    ccGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCt                                                                    >  2:2536476/1‑93 (MQ=255)

                      ggCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTAt                                                                  <  1:841285/93‑1 (MQ=255)

                       gcgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATc                                                                 <  2:4037996/93‑1 (MQ=255)

                        cgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCa                                                                >  2:4322707/1‑93 (MQ=255)

                         gcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCAt                                                               <  2:2167594/93‑1 (MQ=255)

                          cgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATg                                                              <  2:5603343/93‑1 (MQ=255)

                           gcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGCTAACCGCGCCGCGCTATCATGc                                                             >  1:3309211/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                          <  1:1192138/93‑1 (MQ=255)

                               accaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTg                                                         >  1:4404305/1‑93 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                        <  1:1259456/93‑1 (MQ=255)

                                 caccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAg                                                       >  2:2218851/1‑93 (MQ=255)

                                  accGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                      <  2:5228775/93‑1 (MQ=255)

                                   ccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTc                                                     >  1:3988385/1‑93 (MQ=255)

                                     gTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGc                                                   >  2:4782509/1‑93 (MQ=255)

                                      tGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGcc                                                  >  2:2459455/1‑93 (MQ=255)

                                       gCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGccc                                                 >  1:1023934/1‑93 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              <  1:664249/93‑1 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              >  2:1701468/1‑93 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              <  1:6177448/93‑1 (MQ=255)

                                           ccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTg                                             >  1:137132/1‑93 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            <  2:1327528/93‑1 (MQ=255)

                                            cGGAAAATGATACGGCTATGGCCAGCAAGCGGACGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGCGTCGCCCTCTgg                                            <  2:4449078/93‑1 (MQ=255)

                                             ggAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGa                                           >  1:300505/1‑93 (MQ=255)

                                             ggAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGa                                           >  2:1024932/1‑93 (MQ=255)

                                             ggAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGa                                           >  2:4554358/1‑93 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                          <  2:4638729/93‑1 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                          >  1:2559202/1‑93 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                          <  2:4480151/93‑1 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                          >  2:4998195/1‑93 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                          <  1:6108363/93‑1 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         >  2:4689894/1‑93 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         >  1:4905176/1‑93 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         >  2:723141/1‑93 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         <  2:356640/93‑1 (MQ=255)

                                                  atgatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCg                                      >  1:3755587/1‑93 (MQ=255)

                                                     atgCGGCTATCGCCAGCAAGCGGGCTGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAg                                   <  1:2800018/93‑1 (MQ=255)

                                                     atgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAg                                   <  1:2146290/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  1:5304133/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  1:2837832/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  1:1713407/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  2:3791290/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  2:3485032/93‑1 (MQ=255)

                                                        cGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCgg                                <  2:4148236/93‑1 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               <  2:2310645/93‑1 (MQ=255)

                                                          gcgaTCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGaa                              <  1:1079113/90‑1 (MQ=255)

                                                          gCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGaa                              <  1:5706956/93‑1 (MQ=255)

                                                           cTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAg                             <  2:3834450/93‑1 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                            <  1:3910794/93‑1 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                            <  2:2583402/93‑1 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGACGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                            >  1:3360061/1‑93 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                         <  2:1143372/93‑1 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                         <  1:1687762/93‑1 (MQ=255)

                                                                gCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATc                        >  2:5937315/1‑93 (MQ=255)

                                                                 ccAGCAAGCTGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCg                       <  2:1465650/93‑1 (MQ=255)

                                                                 ccAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCg                       <  2:3085898/93‑1 (MQ=255)

                                                                   aGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGcc                     <  1:3585919/93‑1 (MQ=255)

                                                                   aGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGcc                     <  2:293784/93‑1 (MQ=255)

                                                                    gCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGccc                    <  1:1518576/93‑1 (MQ=255)

                                                                     cAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCg                   <  1:4455795/93‑1 (MQ=255)

                                                                      aaGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGccccc                  >  2:1985159/1‑91 (MQ=255)

                                                                       aGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCa                 >  1:1822286/1‑93 (MQ=255)

                                                                       aGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCa                 >  1:3212149/1‑93 (MQ=255)

                                                                        gcgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCAt                <  1:1218539/93‑1 (MQ=255)

                                                                        gcgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCAt                <  1:6035083/93‑1 (MQ=255)

                                                                         cgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATg               <  1:4042573/93‑1 (MQ=255)

                                                                           ggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAt             >  2:5847636/1‑93 (MQ=255)

                                                                           ggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAt             >  2:3000700/1‑93 (MQ=255)

                                                                              ggAATTTAACGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCCGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTaa          >  2:6152632/1‑93 (MQ=255)

                                                                               gAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAc         >  2:184172/1‑93 (MQ=255)

                                                                                aaTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAcc        <  2:4928151/93‑1 (MQ=255)

                                                                                aaTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAcc        <  2:5209163/93‑1 (MQ=255)

                                                                                 aTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCt       <  1:2755462/93‑1 (MQ=255)

                                                                                 aTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCt       <  1:1573205/93‑1 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg      <  2:5361528/93‑1 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg      <  2:2712781/93‑1 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg      >  2:1873616/1‑93 (MQ=255)

                                                                                  tttATCGCTGAAGGGTTAACCGCGCCGCGCTATCATGCCTTGCGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCTCGCATGATTAACCTg      >  2:2384135/1‑93 (MQ=255)

                                                                                   ttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGAATGATTAACCTgg     <  1:6223563/93‑1 (MQ=255)

                                                                                    tATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGc    <  2:3541449/93‑1 (MQ=255)

                                                                                     aTCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGca   >  2:846488/1‑93 (MQ=255)

                                                                                      tCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGcac  <  2:2874582/93‑1 (MQ=255)

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCAC  >  NC_000913/3008552‑3008730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`