BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,047,558	T→C	V4V (GTA→GTG)	gcvH ←	GcvH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,047,558	0	T	C	100.0%	870.5 / NA	271	V4V (GTA→GTG)	gcvH	GcvH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (136/135); total (136/135)

Only 100 of 275 total aligned reads displayed.

CTGAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGTACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAACCGG  >  NC_000913/3047468‑3047646

 tGAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACg                                                                                       >  1:1724511/1‑93 (MQ=255)

 tGAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACg                                                                                       >  2:4056403/1‑93 (MQ=255)

  gAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGt                                                                                      >  1:3444157/1‑93 (MQ=255)

  gAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGt                                                                                      <  1:5023307/93‑1 (MQ=255)

  gAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGt                                                                                      <  2:1973837/93‑1 (MQ=255)

   aGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGtt                                                                                     >  1:3321694/1‑93 (MQ=255)

   aGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCACTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGtt                                                                                     <  2:1060726/93‑1 (MQ=255)

    gCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTg                                                                                    >  1:2098810/1‑93 (MQ=255)

     cATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGc                                                                                   <  1:693436/93‑1 (MQ=255)

       tGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCtc                                                                                 >  1:649419/1‑93 (MQ=255)

        gTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCtca                                                                                >  1:2034327/1‑93 (MQ=255)

         ttCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCtcat                                                                               >  1:4194499/1‑93 (MQ=255)

          tCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCtcatc                                                                              >  1:1046165/1‑93 (MQ=255)

            ggTAATCCCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATCCGTGTTCTTTGCTATATTTCAGTTCTGCTGGCACGTTGCTCatcaa                                                                            <  2:590140/93‑1 (MQ=255)

            ggTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaa                                                                            >  1:2987927/1‑93 (MQ=255)

            ggTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaa                                                                            >  1:4811738/1‑93 (MQ=255)

            ggTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaa                                                                            >  2:5732475/1‑93 (MQ=255)

             gTAATACCAACGGGGTAAGTGCCGGCGGCTTCTTTACGCAGGCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGGACGTTGCTCatcaat                                                                           >  2:3140973/1‑93 (MQ=255)

              tAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaatc                                                                          >  1:2921510/1‑93 (MQ=255)

               aaTACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaatca                                                                         <  2:4749052/93‑1 (MQ=255)

               aaTACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCatcaatca                                                                         >  1:5898412/1‑93 (MQ=255)

                 tACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATcaatcaat                                                                       >  2:1521866/1‑93 (MQ=255)

                  aCCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCaatcaatc                                                                      >  2:5218694/1‑93 (MQ=255)

                  aCCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCaatcaatc                                                                      <  1:1123457/93‑1 (MQ=255)

                   ccAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAAtct                                                                     >  1:6298800/1‑93 (MQ=255)

                    cAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAAtctc                                                                    >  1:5665826/1‑93 (MQ=255)

                       cGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaa                                                                 <  1:290231/93‑1 (MQ=255)

                        ggTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaaa                                                                >  2:3512430/1‑93 (MQ=255)

                         gtgtAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaaaa                                                               >  1:5257240/1‑93 (MQ=255)

                          tgtAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaaaaa                                                              <  1:2573830/93‑1 (MQ=255)

                          tgtAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaaaaa                                                              >  2:1812679/1‑93 (MQ=255)

                           gtAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCaaaaaa                                                             <  1:5281004/93‑1 (MQ=255)

                            tAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAg                                                            >  2:5449356/1‑93 (MQ=255)

                            tAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAg                                                            <  2:1743142/93‑1 (MQ=255)

                              aGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTa                                                          >  2:3209926/1‑93 (MQ=255)

                               gTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTaa                                                         <  2:2194279/93‑1 (MQ=255)

                               gTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTaa                                                         >  2:5574281/1‑93 (MQ=255)

                               gTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTaa                                                         >  2:616060/1‑93 (MQ=255)

                                tGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTaaa                                                        <  1:4527533/93‑1 (MQ=255)

                                tGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTaaa                                                        <  1:4699984/93‑1 (MQ=255)

                                 gCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAAt                                                       <  1:3125556/93‑1 (MQ=255)

                                   cGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCa                                                     <  2:303070/93‑1 (MQ=255)

                                   cGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCa                                                     >  2:1936553/1‑93 (MQ=255)

                                    gTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCAc                                                    >  1:3027241/1‑93 (MQ=255)

                                    gTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCAc                                                    <  1:4311716/93‑1 (MQ=255)

                                     tCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCAcg                                                   >  2:6107441/1‑93 (MQ=255)

                                      cGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCAcgc                                                  <  2:2567641/93‑1 (MQ=255)

                                        gCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGa                                                >  1:274672/1‑93 (MQ=255)

                                        gCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGa                                                >  1:2297144/1‑93 (MQ=255)

                                        gCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGa                                                <  1:1610617/93‑1 (MQ=255)

                                         ctttttTCCGCAGCCATTGGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGAc                                               <  2:2278677/93‑1 (MQ=255)

                                          ttcttTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACg                                              <  1:5504619/93‑1 (MQ=255)

                                            cttTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGc                                            >  1:3967621/1‑93 (MQ=255)

                                             tttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCt                                           >  2:4185860/1‑93 (MQ=255)

                                             tttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCt                                           >  1:6038910/1‑93 (MQ=255)

                                              ttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCtt                                          >  1:5758307/1‑93 (MQ=255)

                                              ttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCtt                                          <  2:3825599/93‑1 (MQ=255)

                                              ttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCtt                                          >  2:639421/1‑93 (MQ=255)

                                              ttACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCtt                                          <  1:2794257/93‑1 (MQ=255)

                                               tACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCttt                                         <  2:3501747/93‑1 (MQ=255)

                                                 cGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGc                                       >  1:4340787/1‑93 (MQ=255)

                                                  gCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGcc                                      >  1:831451/1‑93 (MQ=255)

                                                  gCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGcc                                      >  1:2375613/1‑93 (MQ=255)

                                                    aGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGt                                    >  2:5505073/1‑93 (MQ=255)

                                                    aGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGt                                    >  1:960059/1‑93 (MQ=255)

                                                     gCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGtt                                   >  2:4411799/1‑93 (MQ=255)

                                                     gCCATTCGCGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAACAGTAAATCACGCGACGGCTTTGCCGtt                                   >  1:3500667/1‑93 (MQ=255)

                                                      ccATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTa                                  >  2:1922194/1‑93 (MQ=255)

                                                      ccATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTa                                  <  1:2325593/93‑1 (MQ=255)

                                                      ccATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTa                                  <  2:5366683/93‑1 (MQ=255)

                                                       cATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTAc                                 >  1:1477178/1‑93 (MQ=255)

                                                       cATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTAc                                 <  1:4843720/93‑1 (MQ=255)

                                                        aTTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACg                                >  2:1223806/1‑93 (MQ=255)

                                                        aTTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACg                                >  2:4604787/1‑93 (MQ=255)

                                                         ttCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGc                               >  2:5667489/1‑93 (MQ=255)

                                                         ttCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGc                               >  1:387031/1‑93 (MQ=255)

                                                         ttCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGc                               >  1:3394532/1‑93 (MQ=255)

                                                             tgtTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACaa                           >  1:3209464/1‑93 (MQ=255)

                                                             tgtTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCAGTTACGCACaa                           >  2:4998165/1‑93 (MQ=255)

                                                              gtTCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACaaa                          <  2:131070/93‑1 (MQ=255)

                                                               ttCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACaaaa                         <  2:4256190/93‑1 (MQ=255)

                                                               ttCTTTGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACaaaa                         >  2:1610700/1‑93 (MQ=255)

                                                                  tttGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACa                      <  2:1480341/93‑1 (MQ=255)

                                                                  tttGCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGGAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACa                      <  2:5831519/93‑1 (MQ=255)

                                                                     gCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGt                   <  2:385064/93‑1 (MQ=255)

                                                                     gCTGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGt                   <  1:6133325/93‑1 (MQ=255)

                                                                       tGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGttt                 >  1:5119585/1‑93 (MQ=255)

                                                                       tGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGttt                 >  2:714316/1‑93 (MQ=255)

                                                                       tGTATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGttt                 >  1:4096937/1‑93 (MQ=255)

                                                                         tATTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTg               <  2:3951947/93‑1 (MQ=255)

                                                                          aTTTCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGt              <  2:2113678/93‑1 (MQ=255)

                                                                           tttCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTc             >  1:1791719/1‑93 (MQ=255)

                                                                           tttCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTc             <  1:1265314/93‑1 (MQ=255)

                                                                            ttCAGTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCa            >  2:3557881/1‑93 (MQ=255)

                                                                                gTTCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACttt        >  1:1665124/1‑93 (MQ=255)

                                                                                 ttCTGCTGGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTa       <  1:3160902/93‑1 (MQ=255)

                                                                                   ctgctgGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAAc     >  1:3703923/1‑93 (MQ=255)

                                                                                     gctgGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAACCg   <  2:6212059/93‑1 (MQ=255)

                                                                                     gctgGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAACCg   <  2:4824136/93‑1 (MQ=255)

                                                                                      ctgGCACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAACCgg  >  2:5958192/1‑93 (MQ=255)

CTGAGCATGTTCGGTAATACCAACGGTGTAAGTGCCGTCGGCTTCTTTACGCAGCCATTCGTGTTCTTTGCTGTATTTCAGTTCTGCTGGTACGTTGCTCATCAATCAATCTCCAAAAAAGTAAATCACGCGACGGCTTTGCCGTTACGCACAAAAACAGGTTTTGTCACTTTAACCGG  >  NC_000913/3047468‑3047646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`