BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,100,603	A→G	F90L (TTC→CTC)	yggH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,100,603	0	A	G	100.0%	837.1 / NA	260	F90L (TTC→CTC)	yggH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (143/117); total (143/117)

Only 100 of 271 total aligned reads displayed.

GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA  >  NC_000913/3100513‑3100692

gACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGt                                                                                         >  1:1855624/1‑93 (MQ=255)

 acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc                                                                                        <  1:4099230/93‑1 (MQ=255)

 acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc                                                                                        <  1:3702897/93‑1 (MQ=255)

 acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc                                                                                        <  2:2706842/93‑1 (MQ=255)

 acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc                                                                                        <  1:2688638/93‑1 (MQ=255)

   acaTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCt                                                                                      >  1:1381623/1‑93 (MQ=255)

   acaTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCt                                                                                      <  1:2129757/93‑1 (MQ=255)

     aTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGc                                                                                    >  2:4636939/1‑93 (MQ=255)

      tCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCt                                                                                   >  2:3272949/1‑93 (MQ=255)

      tCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCt                                                                                   <  1:2847843/93‑1 (MQ=255)

      ccACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCt                                                                                   <  1:3069326/92‑1 (MQ=255)

       cACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTc                                                                                  <  1:6072365/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 >  2:1572922/1‑93 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 <  2:2921816/93‑1 (MQ=255)

        aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa                                                                                 >  1:1658868/1‑93 (MQ=255)

          gcgcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAgg                                                                               >  1:5149448/1‑93 (MQ=255)

            gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAgggg                                                                             >  2:2362985/1‑92 (MQ=255)

            gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGc                                                                             >  2:477755/1‑93 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          >  1:5923841/1‑93 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          >  2:5914283/1‑93 (MQ=255)

               ggTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGAt                                                                          >  2:5231300/1‑93 (MQ=255)

                gTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATc                                                                         <  1:2460752/93‑1 (MQ=255)

                gTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATc                                                                         <  1:2070788/93‑1 (MQ=255)

                gTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATc                                                                         >  1:2737287/1‑93 (MQ=255)

                  tGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCtt                                                                       >  2:25971/1‑93 (MQ=255)

                  tGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCtt                                                                       >  2:1385494/1‑93 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      <  2:5149448/93‑1 (MQ=255)

                   gCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCttt                                                                      >  1:4636463/1‑93 (MQ=255)

                     ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg                                                                    >  1:5996901/1‑93 (MQ=255)

                      tAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGc                                                                   >  2:84402/1‑93 (MQ=255)

                      tAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGCAGGTCCTGCTCAGGGCGATCTTTAGc                                                                   >  1:4871476/1‑93 (MQ=255)

                      tAAACCTTCTTCATGCACAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGc                                                                   <  1:907762/93‑1 (MQ=255)

                        aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa                                                                 >  1:1055383/1‑93 (MQ=255)

                        aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa                                                                 <  1:3755072/93‑1 (MQ=255)

                         aCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAt                                                                <  1:3838652/93‑1 (MQ=255)

                         aCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAt                                                                >  2:3109227/1‑93 (MQ=255)

                          ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt                                                               >  1:4732612/1‑93 (MQ=255)

                          ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt                                                               >  1:1931957/1‑93 (MQ=255)

                          ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt                                                               <  2:818623/93‑1 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             <  2:2612169/93‑1 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             >  2:3704786/1‑93 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             >  1:1105624/1‑93 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             >  1:1275674/1‑93 (MQ=255)

                            ttcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGc                                                             <  1:1424866/93‑1 (MQ=255)

                             tcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcc                                                            >  1:5046471/1‑93 (MQ=255)

                             tcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcc                                                            <  1:2295490/93‑1 (MQ=255)

                             tcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcc                                                            >  1:407887/1‑93 (MQ=255)

                              cttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcca                                                           <  2:1776513/93‑1 (MQ=255)

                                 cATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccacca                                                        >  1:2581839/1‑93 (MQ=255)

                                  aTGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAg                                                       >  1:3975346/1‑93 (MQ=255)

                                   tGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGc                                                      >  2:1252355/1‑93 (MQ=255)

                                    gcgcAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCg                                                     <  1:342334/93‑1 (MQ=255)

                                     cgcAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGa                                                    <  1:6276701/93‑1 (MQ=255)

                                        aGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGc                                                 <  1:5667859/93‑1 (MQ=255)

                                        aGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGc                                                 <  2:4315706/93‑1 (MQ=255)

                                         gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc                                                <  1:4559176/93‑1 (MQ=255)

                                           aGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcccc                                              >  2:5820833/1‑93 (MQ=255)

                                           aGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcccc                                              >  1:2909216/1‑93 (MQ=255)

                                              cAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAt                                           <  1:4230657/93‑1 (MQ=255)

                                              cAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAt                                           >  1:6198656/1‑93 (MQ=255)

                                              cAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAt                                           <  2:4520962/93‑1 (MQ=255)

                                               aGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATg                                          >  2:5842815/1‑93 (MQ=255)

                                               aGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATg                                          >  2:549967/1‑93 (MQ=255)

                                               aGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATg                                          >  2:1622329/1‑93 (MQ=255)

                                                ggCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGc                                         <  1:1196167/93‑1 (MQ=255)

                                                   acgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaa                                      >  2:1700184/1‑93 (MQ=255)

                                                    cgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaaa                                     >  1:5282438/1‑93 (MQ=255)

                                                    cgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaaa                                     >  2:2655965/1‑93 (MQ=255)

                                                         cAACGTCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa                                <  2:318504/93‑1 (MQ=255)

                                                         cAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa                                <  2:6223042/93‑1 (MQ=255)

                                                         cAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa                                <  2:2195877/93‑1 (MQ=255)

                                                          aaCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAt                               <  1:1602473/93‑1 (MQ=255)

                                                            cGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtct                             >  2:3838981/1‑93 (MQ=255)

                                                               ccGGTGAATGCACTTCAATGCCGTGGAGGTCCTGCTCAGGGCGATCGTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          >  2:5074498/1‑93 (MQ=255)

                                                               ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          >  1:3628342/1‑93 (MQ=255)

                                                               ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          >  2:5360883/1‑93 (MQ=255)

                                                               ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa                          <  2:3525864/93‑1 (MQ=255)

                                                                cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         >  1:3457458/1‑93 (MQ=255)

                                                                cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg                         >  2:208054/1‑93 (MQ=255)

                                                                  gTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCg                       >  2:366096/1‑93 (MQ=255)

                                                                   tGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGt                      >  2:4067642/1‑93 (MQ=255)

                                                                    gAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTc                     >  1:5610348/1‑93 (MQ=255)

                                                                    gAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTc                     >  2:5624142/1‑93 (MQ=255)

                                                                      aTGCACTTCAATGACGAGGGTGTCCTGCTCAGGGCGATCTTTAGCCATTGCCTCCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc                   <  2:62028/93‑1 (MQ=255)

                                                                        gCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAcca                 <  2:1912339/93‑2 (MQ=255)

                                                                        gCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCg                 >  2:205359/1‑93 (MQ=255)

                                                                         cACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCgg                <  2:6040138/93‑1 (MQ=255)

                                                                          aCTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgc               >  2:3999689/1‑93 (MQ=255)

                                                                           cTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcg              >  2:2462701/1‑93 (MQ=255)

                                                                           cTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcg              >  1:3176501/1‑93 (MQ=255)

                                                                              cAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCtt           >  1:5362682/1‑93 (MQ=255)

                                                                                 tGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCAc        <  2:3929902/93‑1 (MQ=255)

                                                                                  gCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACg       >  1:955986/1‑93 (MQ=255)

                                                                                  gCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACg       <  1:4725851/93‑1 (MQ=255)

                                                                                  gCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACg       <  2:4129204/93‑1 (MQ=255)

                                                                                    cGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGc     >  2:3394458/1‑93 (MQ=255)

                                                                                    cGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGc     >  1:2893881/1‑93 (MQ=255)

                                                                                     gaggagGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGcc    >  1:4501217/1‑93 (MQ=255)

                                                                                      aggaggTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCa   >  1:1544413/1‑93 (MQ=255)

                                                                                      aggaggTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCa   <  1:2354332/93‑1 (MQ=255)

GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA  >  NC_000913/3100513‑3100692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`