BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,129,641	C→T	V261V (GTG→GTA)	b2983 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,129,641	0	C	T	100.0%	762.2 / NA	208	V261V (GTG→GTA)	b2983	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (101/107); total (101/107)

Only 100 of 220 total aligned reads displayed.

CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129551‑3129730

   aCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtgt                                                                                      <  2:635210/93‑1 (MQ=255)

     ccGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgc                                                                                    <  1:3779640/93‑1 (MQ=255)

     ccGCGGGCTTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGCCCTAACACGATCCCCACCAATACTGtgc                                                                                    <  1:4318336/93‑1 (MQ=255)

      cGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgct                                                                                   >  1:5706102/1‑93 (MQ=255)

      cGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgct                                                                                   >  2:5622969/1‑93 (MQ=255)

       gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg                                                                                  >  1:3668126/1‑93 (MQ=255)

       gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg                                                                                  >  2:512037/1‑93 (MQ=255)

         tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctgta                                                                                >  1:5973838/1‑91 (MQ=255)

         tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCa                                                                                >  1:1027126/1‑93 (MQ=255)

         tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCa                                                                                <  2:886896/93‑1 (MQ=255)

           gCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCCCCCATACTGTGCTGCACg                                                                              >  1:1300267/1‑93 (MQ=255)

            cGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGa                                                                             <  1:1375734/93‑1 (MQ=255)

            cGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCACCCAATACTGTGCTGCACgg                                                                             >  1:3652156/1‑92 (MQ=255)

             gTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAg                                                                            >  1:5639620/1‑93 (MQ=255)

              ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt                                                                           >  1:4758697/1‑93 (MQ=255)

              ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt                                                                           >  2:5540959/1‑93 (MQ=255)

                 cggcggCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAc                                                                        <  1:5284563/93‑1 (MQ=255)

                     ggcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACgcgc                                                                    <  2:6151783/93‑1 (MQ=255)

                      gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGcc                                                                   <  1:4667678/93‑1 (MQ=255)

                      gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGcc                                                                   >  1:495801/1‑93 (MQ=255)

                       cgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCg                                                                  >  1:4085449/1‑93 (MQ=255)

                        gTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGa                                                                 >  2:2344863/1‑93 (MQ=255)

                         tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  2:3026902/1‑93 (MQ=255)

                         tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  2:1822526/1‑93 (MQ=255)

                         tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  2:785285/1‑93 (MQ=255)

                          cGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAcc                                                               <  2:3896977/93‑1 (MQ=255)

                           gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa                                                              >  1:6116525/1‑93 (MQ=255)

                           gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa                                                              >  1:445772/1‑93 (MQ=255)

                            aagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAg                                                             <  2:74172/93‑1 (MQ=255)

                             agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa                                                            <  2:3613105/93‑1 (MQ=255)

                              gaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAt                                                           >  2:4061928/1‑93 (MQ=255)

                               aaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATg                                                          >  1:3469086/1‑93 (MQ=255)

                                aTGTGATGGCCATTTCAAATACCCGGGCGGCACCGGGTCCTACCCCGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAttg                                                         <  2:4344866/93‑3 (MQ=255)

                                aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg                                                         <  2:3589140/93‑1 (MQ=255)

                                aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg                                                         <  2:29095/93‑1 (MQ=255)

                                 tGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGa                                                        >  1:3060878/1‑93 (MQ=255)

                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg                                                       >  2:5498446/1‑93 (MQ=255)

                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGATACGCGCCGACCAGATGGAg                                                       >  1:2807571/1‑93 (MQ=255)

                                   tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGACCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGCCCAGATGGAGt                                                      <  2:4967712/93‑1 (MQ=255)

                                    cATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTg                                                     <  1:1870066/93‑1 (MQ=255)

                                     aTGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTgg                                                    >  1:1806778/1‑93 (MQ=255)

                                      tGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTggg                                                   <  1:1601877/93‑1 (MQ=255)

                                       ggCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGc                                                  <  1:978217/93‑1 (MQ=255)

                                         cGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCaa                                                >  1:2398356/1‑93 (MQ=255)

                                           aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg                                              >  1:60217/1‑93 (MQ=255)

                                           aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg                                              >  2:2483768/1‑93 (MQ=255)

                                            ttttAAATAACCCGGCGGCAGCGGGTCCTAACGCGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt                                             <  1:381591/93‑1 (MQ=255)

                                            ttttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt                                             >  2:3319232/1‑93 (MQ=255)

                                             tttAAATAACCCGGCGGCAGCGGGTCCTAACATGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgtt                                            <  2:2172894/93‑1 (MQ=255)

                                             tttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCNNCCAGATGGAGTGGNNAATntt                                            >  1:5814434/1‑93 (MQ=255)

                                             tttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgtt                                            <  2:5479245/93‑1 (MQ=255)

                                               tAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttgg                                          <  2:1599747/93‑1 (MQ=255)

                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  1:4196985/93‑1 (MQ=255)

                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  2:278753/93‑1 (MQ=255)

                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  1:2788288/93‑1 (MQ=255)

                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  1:4646444/93‑1 (MQ=255)

                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  1:932751/93‑1 (MQ=255)

                                                     aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc                                    >  2:3792854/1‑93 (MQ=255)

                                                     aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc                                    <  1:5874716/93‑1 (MQ=255)

                                                      cccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa                                   >  2:2041351/1‑93 (MQ=255)

                                                       ccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAg                                  >  2:3061319/1‑93 (MQ=255)

                                                            ggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa                             >  2:2730924/1‑93 (MQ=255)

                                                            ggcAGCGGGCCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa                             <  2:4732283/93‑1 (MQ=255)

                                                             gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            >  1:5472176/1‑93 (MQ=255)

                                                             gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            >  2:3108545/1‑93 (MQ=255)

                                                               aGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGGGGGCAATGGTGGTTGACCAGACAAAACt                          >  1:2881138/1‑93 (MQ=255)

                                                                gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCTCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  1:3328037/1‑93 (MQ=255)

                                                                gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  2:1093204/1‑93 (MQ=255)

                                                                gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  1:870910/1‑93 (MQ=255)

                                                                 cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc                        <  2:4631343/93‑1 (MQ=255)

                                                                 cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc                        <  1:3644794/93‑1 (MQ=255)

                                                                 cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc                        >  2:4161164/1‑93 (MQ=255)

                                                                     tCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcgc                    >  2:122698/1‑93 (MQ=255)

                                                                     tCCTAACACGATCCCCACCAATACTGTGCTGCACGAGGTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcgc                    >  2:3189575/1‑93 (MQ=255)

                                                                        tAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGcc                 <  1:3220082/93‑1 (MQ=255)

                                                                        tAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGcc                 >  1:504694/1‑93 (MQ=255)

                                                                         aaCACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCt                >  1:2293704/1‑93 (MQ=255)

                                                                          acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt               <  2:3007297/93‑1 (MQ=255)

                                                                          acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt               <  2:5971308/93‑1 (MQ=255)

                                                                            acGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTa             >  1:1158861/1‑93 (MQ=255)

                                                                            acGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTa             <  2:295944/93‑1 (MQ=255)

                                                                             cGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTaa            <  2:2598066/93‑1 (MQ=255)

                                                                              gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt           >  1:1257977/1‑93 (MQ=255)

                                                                              gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt           >  2:3144360/1‑93 (MQ=255)

                                                                              gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt           <  1:6245665/93‑1 (MQ=255)

                                                                               aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATg          <  1:2499213/93‑1 (MQ=255)

                                                                               aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATg          >  1:300153/1‑93 (MQ=255)

                                                                               aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACACGCCTTTAATg          >  2:1916934/1‑93 (MQ=255)

                                                                                tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         >  2:5207870/1‑93 (MQ=255)

                                                                                tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         <  1:2112218/93‑1 (MQ=255)

                                                                                tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         <  2:3734631/93‑1 (MQ=255)

                                                                                  cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       >  2:445864/1‑93 (MQ=255)

                                                                                  cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       <  2:1054830/93‑1 (MQ=255)

                                                                                   ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      >  2:1483695/1‑93 (MQ=255)

                                                                                   ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      >  1:740073/1‑93 (MQ=255)

                                                                                    caccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCg     <  2:3668386/93‑1 (MQ=255)

                                                                                     cccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    <  1:515907/92‑1 (MQ=255)

                                                                                     accaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    >  1:3881387/1‑93 (MQ=255)

                                                                                      ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg   <  2:5353920/93‑1 (MQ=255)

                                                                                      ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg   >  2:5312088/1‑93 (MQ=255)

CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129551‑3129730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`