BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	340,829	T→C	Y161H (TAC→CAC)	yahJ →	putative deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	340,829	0	T	C	100.0%	721.0 / NA	222	Y161H (TAC→CAC)	yahJ	putative deaminase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/105); total (117/105)

Only 100 of 226 total aligned reads displayed.

GGGCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGTACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGTT  >  NC_000913/340739‑340918

 ggCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGcaca                                                                                        <  1:2911559/93‑1 (MQ=255)

 ggCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGcaca                                                                                        <  1:5171955/93‑1 (MQ=255)

  gCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCacac                                                                                       >  2:347981/1‑93 (MQ=255)

  gCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCacac                                                                                       <  1:358634/93‑1 (MQ=255)

  gCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCacac                                                                                       <  2:4270946/93‑1 (MQ=255)

   ccGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACt                                                                                      >  2:5585148/1‑93 (MQ=255)

     gTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCa                                                                                    >  1:3292068/1‑93 (MQ=255)

     gTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCa                                                                                    <  2:3097167/93‑1 (MQ=255)

     gTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCa                                                                                    >  1:665290/1‑93 (MQ=255)

      tGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAg                                                                                   <  2:2325489/93‑1 (MQ=255)

        gcgcTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGa                                                                                 <  1:5140917/93‑1 (MQ=255)

        gcgcTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGa                                                                                 <  1:444011/93‑1 (MQ=255)

         cgctcgctCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAg                                                                                <  2:3336608/93‑1 (MQ=255)

         cgctcgctCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAg                                                                                <  1:5587890/93‑1 (MQ=255)

          gctcgctcAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGc                                                                               <  1:5493374/93‑1 (MQ=255)

           ctcgctcAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCg                                                                              >  2:5863013/1‑93 (MQ=255)

           ctcgctcAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCg                                                                              >  1:1682661/1‑93 (MQ=255)

               ctcAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCa                                                                          >  1:3728887/1‑93 (MQ=255)

               ctcAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCa                                                                          <  1:1728472/93‑1 (MQ=255)

                 cAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGa                                                                        <  1:5711974/93‑1 (MQ=255)

                  aaTCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGaa                                                                       >  1:2866048/1‑93 (MQ=255)

                    tCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGaaaa                                                                     <  1:488482/93‑1 (MQ=255)

                    tCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGaaaa                                                                     >  1:3557181/1‑93 (MQ=255)

                      gTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAAc                                                                   >  1:240246/1‑93 (MQ=255)

                        ccGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtg                                                                 >  1:3205145/1‑93 (MQ=255)

                        ccGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtg                                                                 <  1:1898533/93‑1 (MQ=255)

                         cGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtga                                                                <  1:4297399/93‑1 (MQ=255)

                          ggcagggaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCCACCGCACACTCAGGAGCGGGCAGAAAAACtgat                                                               >  1:2481226/1‑93 (MQ=255)

                          ggcaggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgat                                                               <  2:4054667/93‑1 (MQ=255)

                           gcaggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgatt                                                              <  2:1850133/93‑1 (MQ=255)

                           gcaggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgatt                                                              <  2:418851/93‑1 (MQ=255)

                           gcaggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgatt                                                              <  1:988944/93‑1 (MQ=255)

                             aggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgattga                                                            <  1:873220/93‑1 (MQ=255)

                             aggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgattga                                                            >  1:1342482/1‑93 (MQ=255)

                              ggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgattgat                                                           >  2:4974962/1‑93 (MQ=255)

                              ggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgattgat                                                           <  1:1973622/93‑1 (MQ=255)

                              ggcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACtgattgat                                                           >  2:2509127/1‑93 (MQ=255)

                               gcaCCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTgattgatt                                                          <  2:5904577/93‑1 (MQ=255)

                                 accaccATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTa                                                        <  1:4162484/93‑1 (MQ=255)

                                 accaccATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTa                                                        <  1:3926085/93‑1 (MQ=255)

                                  ccaccaTCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTAt                                                       <  2:238155/93‑1 (MQ=255)

                                   cgccaTCCAGGAGATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGAGCAGAAAAACTGATTGATTTAtt                                                      <  2:1008531/91‑1 (MQ=255)

                                     ccaTCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGc                                                    >  1:4569554/1‑93 (MQ=255)

                                     ccaTCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGc                                                    <  1:2774827/93‑1 (MQ=255)

                                     ccaTCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGc                                                    >  2:4669304/1‑93 (MQ=255)

                                     ccaTCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGc                                                    <  2:5848467/93‑1 (MQ=255)

                                        tCCAGGACATGATCAAGCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACTCTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGt                                                 <  2:858324/93‑1 (MQ=255)

                                        tCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGt                                                 <  1:2133053/93‑1 (MQ=255)

                                        tCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGt                                                 <  1:5610562/93‑1 (MQ=255)

                                         ccAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTc                                                <  1:157789/93‑1 (MQ=255)

                                          cAGGAGATGATCAAACGCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACTCTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCg                                               <  2:5564970/93‑1 (MQ=255)

                                          cAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCg                                               >  2:5945882/1‑93 (MQ=255)

                                          cAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCg                                               >  2:5315463/1‑93 (MQ=255)

                                           aGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGa                                              >  2:3255899/1‑93 (MQ=255)

                                           aGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGa                                              >  1:4359638/1‑93 (MQ=255)

                                           aGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGa                                              >  1:2091453/1‑93 (MQ=255)

                                            ggACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGaa                                             >  2:1404486/1‑93 (MQ=255)

                                            ggACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGaa                                             >  2:1544275/1‑93 (MQ=255)

                                            ggACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGaa                                             >  2:3399570/1‑93 (MQ=255)

                                             gACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGaaa                                            >  2:433405/1‑93 (MQ=255)

                                               cATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAgg                                          <  2:1225909/93‑1 (MQ=255)

                                                aTGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGc                                         >  1:5361458/1‑93 (MQ=255)

                                                aTGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGc                                         >  1:4721312/1‑93 (MQ=255)

                                                aTGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGc                                         >  1:27362/1‑93 (MQ=255)

                                                 tGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGca                                        <  2:2500747/93‑1 (MQ=255)

                                                  gATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGcac                                       >  2:2595251/1‑93 (MQ=255)

                                                   aTCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGcacc                                      <  1:4100909/93‑1 (MQ=255)

                                                      aaaCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCaccacc                                   <  2:5679104/93‑1 (MQ=255)

                                                      aaaCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCaccacc                                   >  1:2452112/1‑93 (MQ=255)

                                                        aCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCAt                                 <  1:1183430/93‑1 (MQ=255)

                                                        aCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCAt                                 <  1:2595511/93‑1 (MQ=255)

                                                        aCTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCAt                                 <  1:5934667/93‑1 (MQ=255)

                                                         cTCGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCAtt                                >  1:6202963/1‑93 (MQ=255)

                                                          tCGAGCAGAAAATGCTGCCGGAACTGCAGCCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTg                               <  2:4874986/93‑1 (MQ=255)

                                                           cGAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGc                              <  2:4362132/93‑1 (MQ=255)

                                                            gAGCAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGcc                             >  1:4237701/1‑93 (MQ=255)

                                                            gAGCACAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGcc                             >  1:1090090/1‑93 (MQ=255)

                                                               cAGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGc                          >  1:501356/1‑93 (MQ=255)

                                                                aGAAAATGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCa                         <  2:5341926/93‑1 (MQ=255)

                                                                    aaTGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCa                     >  2:2242218/1‑93 (MQ=255)

                                                                     aTGCTGCCGGAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCAc                    >  2:6210158/1‑93 (MQ=255)

                                                                             ggAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAatat            >  2:6068464/1‑93 (MQ=255)

                                                                             ggAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAatat            >  1:3815576/1‑93 (MQ=255)

                                                                              gAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATc           >  2:2911303/1‑93 (MQ=255)

                                                                              gAACTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATc           >  2:410702/1‑93 (MQ=255)

                                                                               aaCTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCg          >  1:3806013/1‑93 (MQ=255)

                                                                                 cTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGaa        >  1:1483687/1‑93 (MQ=255)

                                                                                 cTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAACGCACCACCATTGCCCGCAGTCACTGCAATATctac        >  2:254277/1‑90 (MQ=255)

                                                                                 cTGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGAGTGAGTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGaa        >  1:3042517/1‑93 (MQ=255)

                                                                                  tGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAc       >  2:5432704/1‑93 (MQ=255)

                                                                                  tGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAc       <  1:6269205/93‑1 (MQ=255)

                                                                                  tGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAc       <  1:3435463/93‑1 (MQ=255)

                                                                                  tGCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAc       <  1:2674632/93‑1 (MQ=255)

                                                                                   gCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAcc      <  2:1272184/93‑1 (MQ=255)

                                                                                   gCAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAcc      >  2:3752916/1‑93 (MQ=255)

                                                                                   gCAACCGCACACTCAGGAGCGGGCAGAAAAACCGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAAcc      <  1:2257303/93‑1 (MQ=255)

                                                                                    cAACCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCg     <  2:2857764/93‑1 (MQ=255)

                                                                                     aaCCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCgg    <  2:2141799/93‑1 (MQ=255)

                                                                                      aCCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGt   <  2:1810668/93‑1 (MQ=255)

                                                                                      aCCGCACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGt   >  1:749012/1‑93 (MQ=255)

GGGCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGTACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGTT  >  NC_000913/340739‑340918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`