BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,199,703	T→C	Y58H (TAT→CAT)	cca →	tRNA nucleotidyl transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,199,703	0	T	C	100.0%	854.8 / NA	263	Y58H (TAT→CAT)	cca	tRNA nucleotidyl transferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/136); total (127/136)

Only 100 of 269 total aligned reads displayed.

GGCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGTATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAGATGAT  >  NC_000913/3199613‑3199792

 gCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATg                                                                                        >  1:2708481/1‑93 (MQ=255)

 gCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATg                                                                                        >  1:3954505/1‑93 (MQ=255)

   aGTACGCCGCAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATgcg                                                                                      <  1:5683750/93‑1 (MQ=255)

    gTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATgcgc                                                                                     >  1:5978150/1‑93 (MQ=255)

    gTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATgcgc                                                                                     >  1:1968115/1‑93 (MQ=255)

     gaCGCCACAGGAGATCCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCt                                                                                    <  2:3545190/92‑1 (MQ=255)

        gCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGc                                                                                 >  1:1220448/1‑93 (MQ=255)

        gCCACAGGAGATGCGCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGc                                                                                 <  1:4562975/93‑1 (MQ=255)

          cacaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCAc                                                                               >  2:203798/1‑93 (MQ=255)

          cacaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCAc                                                                               <  1:1852949/93‑1 (MQ=255)

          cacaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCAc                                                                               <  1:3783583/93‑1 (MQ=255)

          cacaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCAc                                                                               >  2:2921992/1‑93 (MQ=255)

          cacaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCAc                                                                               <  2:2791281/93‑1 (MQ=255)

           acaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACg                                                                              >  1:6290352/1‑93 (MQ=255)

           acaGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATACGCAAACGCATGAAGAGCATGCGCTGGCACg                                                                              >  2:5964993/1‑93 (MQ=255)

             aGGAGATGCTCGACTCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTa                                                                            <  1:479959/93‑1 (MQ=255)

                  aTGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGaa                                                                       <  2:3941820/93‑1 (MQ=255)

                   tGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAAc                                                                      >  2:4262954/1‑93 (MQ=255)

                    gCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACg                                                                     <  1:326251/93‑1 (MQ=255)

                    gCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACg                                                                     <  2:244464/93‑1 (MQ=255)

                    gCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACg                                                                     >  1:2286970/1‑93 (MQ=255)

                      tCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACAGa                                                                   >  2:4455434/1‑93 (MQ=255)

                        gACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGaaa                                                                 >  1:1001144/1‑93 (MQ=255)

                         aCGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAt                                                                >  1:2500367/1‑93 (MQ=255)

                          cgcgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtc                                                               <  1:4156327/93‑1 (MQ=255)

                          cgcgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtc                                                               <  2:5009635/93‑1 (MQ=255)

                          cgcgGGCTACAAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtc                                                               <  2:5279700/93‑1 (MQ=255)

                           gcgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCGTCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAGtcc                                                              <  1:4153880/93‑1 (MQ=255)

                           gcgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtcc                                                              >  2:3820315/1‑93 (MQ=255)

                           gcgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtcc                                                              <  1:4731071/93‑1 (MQ=255)

                           gcgGCCTCCCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtcc                                                              <  2:5567461/93‑1 (MQ=255)

                            cgGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccg                                                             <  1:5090004/93‑1 (MQ=255)

                              ggCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggt                                                           >  2:2220097/1‑93 (MQ=255)

                                cTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggttc                                                         >  1:1067362/1‑93 (MQ=255)

                                 tACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggttcc                                                        >  1:3132877/1‑93 (MQ=255)

                                  aCCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggttccg                                                       <  2:1032310/93‑1 (MQ=255)

                                   ccAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggttccgg                                                      >  1:6247492/1‑93 (MQ=255)

                                   ccAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAAtccggttccgg                                                      >  1:52221/1‑93 (MQ=255)

                                     agcagGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATccggttccggtt                                                    >  2:1371587/1‑93 (MQ=255)

                                      gcagGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTa                                                   <  2:4812097/93‑1 (MQ=255)

                                      gcagGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTa                                                   <  2:4694629/93‑1 (MQ=255)

                                         ggTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTacac                                                >  1:3052209/1‑93 (MQ=255)

                                         ggTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTacac                                                >  1:5180328/1‑93 (MQ=255)

                                         ggTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTacac                                                <  1:2041783/93‑1 (MQ=255)

                                           tAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCg                                              <  1:3678505/93‑1 (MQ=255)

                                            aGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCgg                                             <  2:2582603/93‑1 (MQ=255)

                                            aGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCgg                                             <  2:895526/93‑1 (MQ=255)

                                             ggCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGt                                            <  1:2617868/93‑1 (MQ=255)

                                              gCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGtt                                           <  2:6145671/93‑1 (MQ=255)

                                                cgcgATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGtttt                                         <  2:2878863/93‑1 (MQ=255)

                                                 accaTTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTa                                        <  2:3392885/90‑1 (MQ=255)

                                                  cgATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTAc                                       >  2:510986/1‑93 (MQ=255)

                                                  cgATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTAc                                       <  2:2263363/93‑1 (MQ=255)

                                                  cgATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTAc                                       >  2:17045/1‑93 (MQ=255)

                                                   gATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACt                                      <  1:5789019/93‑1 (MQ=255)

                                                   gATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGGTCCGGTTACACCGGTTTTACt                                      >  1:617160/1‑93 (MQ=255)

                                                    aTTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACtt                                     <  2:3414600/93‑1 (MQ=255)

                                                     ttttCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTg                                    >  1:2155372/1‑93 (MQ=255)

                                                      tttCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGc                                   <  1:2178736/93‑1 (MQ=255)

                                                      tttCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGc                                   >  2:4394588/1‑93 (MQ=255)

                                                       ttCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCt                                  >  2:2953134/1‑93 (MQ=255)

                                                         ccTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTAt                                >  1:2406826/1‑93 (MQ=255)

                                                         ccTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTAt                                <  2:267155/93‑1 (MQ=255)

                                                         ccTGTGTTTCTGCATCAGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTAt                                >  2:2990397/1‑93 (MQ=255)

                                                          cTGTGTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATg                               >  2:2119061/1‑93 (MQ=255)

                                                           tgtgTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGc                              >  2:5179732/1‑93 (MQ=255)

                                                           tgtgTTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGc                              <  1:3457908/93‑1 (MQ=255)

                                                            gtgtTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGcc                             <  1:1135886/93‑1 (MQ=255)

                                                             tgtTTCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCg                            >  2:4503149/1‑93 (MQ=255)

                                                               tttCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCa                          <  1:429261/93‑1 (MQ=255)

                                                               tttCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCCGTTACACCGGTTTTACTTGCTATGCCgac                          >  1:1529030/1‑91 (MQ=255)

                                                                ttCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCAc                         <  2:182574/93‑1 (MQ=255)

                                                                 tCTGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCAcc                        <  2:1206859/93‑1 (MQ=255)

                                                                   tGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCgg                      >  1:4882106/1‑93 (MQ=255)

                                                                   tGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCgg                      >  2:1567631/1‑93 (MQ=255)

                                                                   tGCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCgg                      >  1:1018028/1‑93 (MQ=255)

                                                                    gCATCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGa                     <  1:2810629/93‑1 (MQ=255)

                                                                      aTCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATg                   <  1:1259545/93‑1 (MQ=255)

                                                                       tCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGt                  >  1:6147138/1‑93 (MQ=255)

                                                                       tCCGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGt                  <  1:3337901/93‑1 (MQ=255)

                                                                        ccGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTc                 <  1:2347872/93‑1 (MQ=255)

                                                                        ccGCAAACGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTc                 >  2:5751344/1‑93 (MQ=255)

                                                                            aaaCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGc             <  2:364343/93‑1 (MQ=255)

                                                                            aaaCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGc             <  2:734273/93‑1 (MQ=255)

                                                                            aaaCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGc             <  1:3313599/93‑1 (MQ=255)

                                                                             aaCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCt            >  2:4283424/1‑93 (MQ=255)

                                                                              aCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTg           >  1:35420/1‑93 (MQ=255)

                                                                              aCGCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGACACGCTg           >  2:1607930/1‑93 (MQ=255)

                                                                                gCATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGa         <  1:1696306/93‑1 (MQ=255)

                                                                                 cATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGaa        <  1:5415207/93‑1 (MQ=255)

                                                                                 cATGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGaa        <  2:3042293/93‑1 (MQ=255)

                                                                                   tGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCGCCGGATGTCACGCTGGAAga      <  1:2951470/93‑1 (MQ=255)

                                                                                   tGAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAga      >  2:6260246/1‑93 (MQ=255)

                                                                                    gAAGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAgat     <  1:6271974/93‑1 (MQ=255)

                                                                                     aaGAGCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAgatg    >  1:1558597/1‑93 (MQ=255)

                                                                                      agagCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTTACGCTGGAAgatga   >  1:5602430/1‑93 (MQ=255)

                                                                                       gagCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTTACGCTGGCAgatgat  >  2:1222032/1‑93 (MQ=255)

                                                                                       gagCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAgatgat  <  1:4408959/93‑1 (MQ=255)

                                                                                       gagCATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAgatgat  >  2:5649401/1‑93 (MQ=255)

                                                                                       gagCATGCGCTGGCACGGACCGAACGGAAATCCGGGTCCGGGTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGGAgatgat  >  2:3918337/1‑93 (MQ=255)

GGCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGTATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAGATGAT  >  NC_000913/3199613‑3199792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`