Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,233,455 T→C D21G (GAC→GGC)  b3084 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,233,4550TC100.0% 649.1 / NA 204D21G (GAC→GGC) b3084hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (100/104);  total (100/104)

Only 100 of 214 total aligned reads displayed.

AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC  >  NC_000913/3233365‑3233544
                                                                                          |                                                                                         
aGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCa                                                                                         >  2:595236/1‑93 (MQ=255)
 ggATCACCACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCAt                                                                                        <  2:2147065/93‑1 (MQ=255)
 ggATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCAt                                                                                        <  2:1535840/93‑1 (MQ=255)
  gATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATc                                                                                       >  2:433843/1‑93 (MQ=255)
  gATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATc                                                                                       >  2:2377353/1‑93 (MQ=255)
   aTCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATcc                                                                                      >  2:2025065/1‑93 (MQ=255)
    tCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCg                                                                                     >  2:4588290/1‑93 (MQ=255)
     cAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGt                                                                                    <  1:1603733/93‑1 (MQ=255)
      aaCACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTc                                                                                   <  1:2952977/93‑1 (MQ=255)
       acacCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCg                                                                                  >  2:3218428/1‑93 (MQ=255)
        cacCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATTCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGc                                                                                 <  1:3384092/93‑1 (MQ=255)
         acCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGcc                                                                                >  1:1852206/1‑93 (MQ=255)
          ccGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTAGCCg                                                                               >  2:2845599/1‑93 (MQ=255)
            gggCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGa                                                                             >  1:1893980/1‑93 (MQ=255)
            gggCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTAGCCGGa                                                                             >  1:680047/1‑93 (MQ=255)
             ggCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCTCGCCTGTAGCGGGTTAACGCTATCCGTCGCCGGaa                                                                            >  1:182270/1‑93 (MQ=255)
              gCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGaaa                                                                           >  1:101104/1‑93 (MQ=255)
                cgcgGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAAc                                                                         <  2:356375/93‑1 (MQ=255)
                  cgGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGt                                                                       <  1:4882830/93‑1 (MQ=255)
                   ggATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGtt                                                                      >  2:3740608/1‑93 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     >  2:4040961/1‑93 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     <  1:4047216/93‑1 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     >  1:3116966/1‑93 (MQ=255)
                      tttCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTa                                                                   >  2:547953/1‑93 (MQ=255)
                       ttCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAg                                                                  <  1:1529380/93‑1 (MQ=255)
                       ttCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAg                                                                  <  2:6224834/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 <  2:1986152/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 <  1:247163/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 <  1:5208788/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 <  1:3295567/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 >  1:4812573/1‑93 (MQ=255)
                           gtgtCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTc                                                              <  1:5543775/93‑1 (MQ=255)
                            tgtCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCa                                                             >  2:3426656/1‑93 (MQ=255)
                               cgtcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTg                                                          <  2:6043626/93‑1 (MQ=255)
                                 tcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGaa                                                        <  2:703863/93‑1 (MQ=255)
                                  ccAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGGGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAc                                                       <  2:858054/93‑1 (MQ=255)
                                  ccAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAc                                                       <  1:2500797/93‑1 (MQ=255)
                                  ccAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAc                                                       <  1:6218825/93‑1 (MQ=255)
                                   cAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACg                                                      <  2:4973619/93‑1 (MQ=255)
                                   cAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACg                                                      <  1:845632/93‑1 (MQ=255)
                                    aaCTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACgg                                                     >  2:3600926/1‑93 (MQ=255)
                                     aCTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGa                                                    >  2:2696149/1‑93 (MQ=255)
                                       tGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGaaa                                                  >  2:147431/1‑93 (MQ=255)
                                       tGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGaaa                                                  >  2:3417136/1‑93 (MQ=255)
                                        tttGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAc                                                 <  2:169052/92‑1 (MQ=255)
                                        gTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGACAGTGAACGGAAAc                                                 <  1:5363590/93‑1 (MQ=255)
                                        gTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGGTGTAGTGTCAGCGAACGGAAAc                                                 >  2:738718/1‑93 (MQ=255)
                                         ttGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAcc                                                <  1:3492082/93‑1 (MQ=255)
                                           gcagcaAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGt                                              <  1:1056121/93‑1 (MQ=255)
                                           gcagcaAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGt                                              <  2:2284868/93‑1 (MQ=255)
                                           gcagcaAATATTCACCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGt                                              <  1:4388157/93‑1 (MQ=255)
                                            gagcaAAGATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGtt                                             <  1:619118/92‑1 (MQ=255)
                                            cagcaAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGtt                                             >  2:3529861/1‑93 (MQ=255)
                                             agcaAATATTCAGCCGCGGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTg                                            <  1:4536579/93‑1 (MQ=255)
                                                aaaTATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAATGGCAACCGTTGTCt                                         >  2:2444816/1‑93 (MQ=255)
                                                aaaTATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCt                                         >  2:4136267/1‑93 (MQ=255)
                                                 aaTATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTa                                        >  2:4800699/1‑93 (MQ=255)
                                                 aaTATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTAAGTGAACGGAAACCGCTGTCTa                                        >  2:4819926/1‑93 (MQ=255)
                                                  atatTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTaa                                       <  1:118549/93‑1 (MQ=255)
                                                   tatTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAg                                      <  2:1646598/93‑1 (MQ=255)
                                                   tatTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAg                                      <  1:502117/93‑1 (MQ=255)
                                                    atTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGt                                     <  2:2117996/93‑1 (MQ=255)
                                                    atTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGt                                     <  1:467023/93‑1 (MQ=255)
                                                      tCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTgg                                   >  2:2056856/1‑93 (MQ=255)
                                                      tCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTgg                                   >  2:5786318/1‑93 (MQ=255)
                                                      tCATCCGCCGCTTCCCACGCCTGTAGCGGATTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTgg                                   <  1:5912849/93‑1 (MQ=255)
                                                          ccgccgCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCa                               <  1:3837267/93‑1 (MQ=255)
                                                           cgccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAt                              <  1:5797117/93‑1 (MQ=255)
                                                           cgccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAt                              >  2:5023510/1‑93 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             <  2:1430157/93‑1 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             <  1:786694/93‑1 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             <  1:6140743/93‑1 (MQ=255)
                                                             ccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCg                            >  2:5182962/1‑93 (MQ=255)
                                                              cgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATctg                           >  2:510598/1‑91 (MQ=255)
                                                               gcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGc                          >  1:5853054/1‑93 (MQ=255)
                                                                cTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGcc                         <  2:185839/93‑1 (MQ=255)
                                                                cTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGcc                         <  1:2150755/93‑1 (MQ=255)
                                                                 ttCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGccc                        >  2:5620949/1‑93 (MQ=255)
                                                                 ttCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGccc                        >  1:3496533/1‑93 (MQ=255)
                                                                  tCCCACGCCCGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcct                       >  1:6301003/1‑93 (MQ=255)
                                                                    ccACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcc                     <  1:2557242/93‑1 (MQ=255)
                                                                    ccACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcc                     <  2:5746688/93‑1 (MQ=255)
                                                                    ccACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcc                     >  2:2315258/1‑93 (MQ=255)
                                                                     cACGCCTGTAGCGGGTTAACGCCATCCGTGGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcct                    <  2:6189072/93‑1 (MQ=255)
                                                                      aCGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTg                   <  1:4609101/93‑1 (MQ=255)
                                                                      aCGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTg                   >  1:6106100/1‑93 (MQ=255)
                                                                       cGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGa                  >  2:1366747/1‑93 (MQ=255)
                                                                        gCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTgca                 >  2:3168483/1‑91 (MQ=255)
                                                                          cTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATg               >  2:3308924/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  1:4096022/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  1:6078929/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  1:86536/1‑93 (MQ=255)
                                                                             tAGCGGGTTAACGCTATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCGCATCGGCCCTCCTGAATGATa            <  2:3843710/93‑1 (MQ=255)
                                                                              aGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATaa           >  1:506860/1‑93 (MQ=255)
                                                                                cGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATaaaa         <  1:4348157/93‑1 (MQ=255)
                                                                                 gggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAt        >  1:3598474/1‑93 (MQ=255)
                                                                                  ggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAtt       <  2:1326133/93‑1 (MQ=255)
                                                                                   gTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAttt      >  1:3873192/1‑93 (MQ=255)
                                                                                    ttAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTc     >  1:4502237/1‑93 (MQ=255)
                                                                                    ttAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTc     >  1:2718820/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC  >  NC_000913/3233365‑3233544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: