Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,224,879 Δ1 bp coding (1005/1434 nt) ygjI → putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,224,8780G.99.8% 1913.8 / ‑3.5 400coding (1004/1434 nt)ygjIputative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base . (179/220);  total (179/221)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

Only 100 of 448 total aligned reads displayed.

GACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTAT  >  NC_000913/3224783‑3224971
                                                                                               |                                                                                              
     cAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAg                                                                                          <  1:3100993/96‑1 (MQ=255)
       aCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCg                                                                                        >  1:13063928/1‑96 (MQ=255)
         gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg                                                                                      >  1:2625597/1‑96 (MQ=255)
         gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg                                                                                      >  1:453630/1‑96 (MQ=255)
         gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg                                                                                      <  2:6178956/96‑1 (MQ=255)
          ctggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTgg                                                                                     <  1:11999508/94‑1 (MQ=255)
          ccGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTgg                                                                                     >  2:29490/1‑96 (MQ=255)
           cGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGa                                                                                    <  1:10187846/96‑1 (MQ=255)
           cGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGa                                                                                    <  2:7654456/96‑1 (MQ=255)
            ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                   <  2:13580320/96‑1 (MQ=255)
            ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                   <  2:12509163/96‑1 (MQ=255)
             gTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAtt                                                                                  <  1:8830610/96‑2 (MQ=255)
             gTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATc                                                                                  <  2:8647880/96‑1 (MQ=255)
               gtaaaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCTGGCGC‑GCGCAGCGTGGATCCa                                                                                <  1:12860400/94‑1 (MQ=255)
               gAAAATTTTCTTCTCCGAACTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCa                                                                                <  1:10001627/96‑1 (MQ=255)
               gAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATcgc                                                                                <  1:11776345/96‑3 (MQ=255)
                  aaTTTTCTTCTCCGACATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGtt                                                                             <  1:13728611/96‑1 (MQ=255)
                  aaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGtt                                                                             >  1:9641192/1‑96 (MQ=255)
                   aTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTc                                                                            <  2:3537688/96‑1 (MQ=255)
                    ttttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGtttc                                                                           <  1:3412799/96‑3 (MQ=255)
                     tttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGACCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGATCCt                                                                          <  2:5716417/96‑1 (MQ=255)
                     tttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCt                                                                          >  1:14347569/1‑96 (MQ=255)
                      ttcttcTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTg                                                                         >  2:249465/1‑96 (MQ=255)
                         ttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATc                                                                      <  2:10178890/96‑1 (MQ=255)
                         ttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATc                                                                      >  2:9848749/1‑96 (MQ=255)
                         ttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATc                                                                      <  1:14182976/96‑1 (MQ=255)
                          tctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCg                                                                     >  2:409632/1‑96 (MQ=255)
                          tctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCg                                                                     <  2:6342858/96‑1 (MQ=255)
                           ctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGt                                                                    >  2:10471301/1‑96 (MQ=255)
                           ctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCG‑GGCGCAGCGTGGATCCAGTTCCTGATCGt                                                                    <  2:13875836/96‑1 (MQ=255)
                            tcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTc                                                                   <  2:8481762/96‑1 (MQ=255)
                            tcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTc                                                                   <  2:9660833/96‑1 (MQ=255)
                             ccGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCa                                                                  >  1:5470173/1‑96 (MQ=255)
                                aaaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATcc                                                               >  2:2076196/1‑96 (MQ=255)
                                 aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAATTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                              <  2:12223491/96‑1 (MQ=255)
                                 aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                              >  2:12037895/1‑96 (MQ=255)
                                  aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCg                                                             <  1:199916/96‑1 (MQ=255)
                                  aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCg                                                             >  2:3132481/1‑96 (MQ=255)
                                   tCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGc                                                            >  2:4875273/1‑96 (MQ=255)
                                   tCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGc                                                            >  1:6696519/1‑96 (MQ=255)
                                    cccGGAAGGCATCTTTGGGAAGAAAACCGTCGAGCTGAACGAAGACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCATGATCGTCATCCCGCt                                                           >  1:2495881/1‑96 (MQ=255)
                                     ccGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtg                                                          >  2:7246255/1‑96 (MQ=255)
                                     ccGGAAGGCATCTTTGCTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtg                                                          <  1:12789593/96‑1 (MQ=255)
                                       gtaaGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCG‑GGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgat                                                        >  1:11867955/3‑96 (MQ=255)
                                       ggAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgat                                                        >  1:7619646/1‑96 (MQ=255)
                                        gAAGGCATCTTTGGTAAGAAAACCTTCGAACTTAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg                                                       <  2:10838211/96‑1 (MQ=255)
                                         aaGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATGCCGCtgatga                                                      >  2:13191100/1‑96 (MQ=255)
                                            gCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGAACGTCATCCCGCTGATGATTa                                                   >  1:1292683/1‑96 (MQ=255)
                                             cATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAt                                                  >  1:11564689/1‑96 (MQ=255)
                                              aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCGGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTGATCCCGCTGATGATTAT‑c                                                >  1:4288689/1‑96 (MQ=255)
                                              aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑c                                                >  2:7584079/1‑96 (MQ=255)
                                              aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑c                                                <  1:8045721/96‑1 (MQ=255)
                                                cTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑ccc                                              <  1:4881179/96‑2 (MQ=255)
                                                cTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑ccc                                              <  1:8291168/96‑2 (MQ=255)
                                                cTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑ccc                                              >  2:464517/1‑95 (MQ=255)
                                                cTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑ccc                                              <  2:9212153/96‑2 (MQ=255)
                                                  ttGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccga                                            >  2:14211096/1‑93 (MQ=255)
                                                   tGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccgat                                           >  1:6474379/1‑92 (MQ=255)
                                                   tGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccgat                                           <  1:4159130/96‑5 (MQ=255)
                                                      aaaGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCt                                         >  1:11425702/2‑96 (MQ=255)
                                                       aaGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc                                        >  2:4241637/1‑96 (MQ=255)
                                                        aGAAACCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg                                       <  1:1559121/96‑1 (MQ=255)
                                                        aGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg                                       <  1:12180726/96‑1 (MQ=255)
                                                        aGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg                                       <  1:8079353/96‑1 (MQ=255)
                                                         gAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCgg                                      <  1:7328073/96‑1 (MQ=255)
                                                           aaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGtt                                    <  2:4425450/96‑1 (MQ=255)
                                                             aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                  <  2:8193610/96‑1 (MQ=255)
                                                             aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                  <  2:157647/96‑1 (MQ=255)
                                                             aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                  <  1:10728663/96‑1 (MQ=255)
                                                              ccGTCGACCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCa                                 <  1:9292878/96‑1 (MQ=255)
                                                               cGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCaa                                >  2:380554/1‑96 (MQ=255)
                                                                gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAAt                               <  2:7888738/96‑1 (MQ=255)
                                                                 tCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa                              <  2:9458105/96‑1 (MQ=255)
                                                                 tCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa                              <  1:9848749/96‑1 (MQ=255)
                                                                  cGACCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc                             <  2:3370970/96‑1 (MQ=255)
                                                                   gAACTGTACGAAAACGGCGTTCCGGGGC‑GCGCAGGGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                            <  2:12785670/96‑1 (MQ=255)
                                                                   gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                            <  2:1483647/96‑1 (MQ=255)
                                                                   gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                            >  2:1176955/1‑96 (MQ=255)
                                                                    aaCTGAGCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCg                           <  2:2832490/96‑1 (MQ=255)
                                                                      cTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTg                         >  1:3340033/1‑96 (MQ=255)
                                                                      cTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTg                         <  2:11059345/96‑1 (MQ=255)
                                                                        gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCa                       <  2:11564689/96‑1 (MQ=255)
                                                                            gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                   >  1:2306895/1‑96 (MQ=255)
                                                                            gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                   <  2:5412848/96‑1 (MQ=255)
                                                                            gAAAACGCCGTTCCGCAGC‑GCGCAGCGCGGATCCAGTTCCTGATAGTCACCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                   <  2:12918397/96‑1 (MQ=255)
                                                                              aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCt                 <  1:9960655/96‑1 (MQ=255)
                                                                              aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCt                 >  1:8398505/1‑96 (MQ=255)
                                                                              aaaCGGCGTGCCGGCG‑AGCGCAGCGTCGATCCAGTTCCTGATCGTCATCTCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCt                 <  1:14219749/96‑1 (MQ=255)
                                                                               agcGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                <  2:1773946/94‑1 (MQ=255)
                                                                               aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                >  2:2655280/1‑96 (MQ=255)
                                                                                aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga               >  1:13628430/1‑96 (MQ=255)
                                                                                aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga               >  1:588887/1‑96 (MQ=255)
                                                                                  ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg             >  2:1135760/1‑96 (MQ=255)
                                                                                  ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg             >  1:6987591/1‑96 (MQ=255)
                                                                                  gacGTTCCGGCGC‑ACGCAGCATGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATCCCGTGCAGGATCtgatg             <  1:4004170/94‑1 (MQ=255)
                                                                                     gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAt          >  1:5133253/1‑96 (MQ=255)
                                                                                      ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGCTCGTAATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGCATCTGATGAATa         <  1:6244540/96‑1 (MQ=255)
                                                                                      ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATa         >  2:6675614/1‑96 (MQ=255)
                                                                                         cggcgc‑gcgcAGCATGGATCCAGTTCCTGATCGGCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACta      >  1:13409110/1‑96 (MQ=255)
                                                                                              tggcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACtattat  >  1:11299060/2‑96 (MQ=255)
                                                                                               |                                                                                              
GACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTAT  >  NC_000913/3224783‑3224971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑