Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,255,616 Δ1 bp intergenic (‑19/+312) yhaO ← / ← yhaP putative transport system permease protein/putative L‑serine dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,255,6150G.99.8% 2048.5 / ‑3.7 428intergenic (‑18/+313)yhaO/yhaPputative transport system permease protein/putative L‑serine dehydratase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (189/238);  minor base C (0/1);  total (189/239)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 469 total aligned reads displayed.

TACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAGG  >  NC_000913/3255519‑3255709
                                                                                                |                                                                                              
tACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAg                                                                                                >  1:7145962/1‑96 (MQ=255)
tACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAg                                                                                                >  2:8991669/1‑96 (MQ=255)
tACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAg                                                                                                >  1:14270966/1‑96 (MQ=255)
 aCTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAgc                                                                                               <  1:5929818/96‑2 (MQ=255)
  cTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCATCACGACGCGCCGGGGTCGAAgcg                                                                                              >  1:10349330/1‑94 (MQ=255)
    cATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAgcgcc                                                                                            <  1:10700690/96‑5 (MQ=255)
     aTAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCt                                                                                          >  2:11144333/1‑96 (MQ=255)
     aTAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCt                                                                                          <  1:12270382/96‑1 (MQ=255)
       aaTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGc                                                                                        >  1:10869016/1‑96 (MQ=255)
       aaTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGc                                                                                        >  2:12703786/1‑96 (MQ=255)
        aacACCCAGCCGGTGTCATTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCa                                                                                       <  1:2244123/94‑1 (MQ=255)
         tCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCaa                                                                                      <  2:607721/96‑1 (MQ=255)
         tCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCaa                                                                                      >  1:12010283/1‑96 (MQ=255)
         tCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCaa                                                                                      <  2:13444813/96‑1 (MQ=255)
          cACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGCCCCGCCGGGGTCGAAGCGTCTGCGAt                                                                                     <  1:6977450/96‑1 (MQ=255)
          cACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAAt                                                                                     <  1:9335369/96‑1 (MQ=255)
           ccccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATg                                                                                    <  1:11188509/95‑1 (MQ=255)
           ccccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATg                                                                                    <  2:1866288/95‑1 (MQ=255)
            cccAGGCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   <  2:11928578/96‑1 (MQ=255)
            cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   >  1:376279/1‑96 (MQ=255)
            cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   <  2:10007815/96‑1 (MQ=255)
            cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   <  1:5381972/96‑1 (MQ=255)
            cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   <  1:2081660/96‑1 (MQ=255)
            cccACCCGGTGCCAGTACTGTCCAATTTGATCGCTTCTCGCAACTCCCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGa                                                                                   <  1:572583/96‑1 (MQ=255)
             ccAGCCGGTGTCCGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCCTTCCAGCACGCCCCGCCGGGGTCGAAGCGTCTGCAATGAc                                                                                  <  2:7375973/96‑1 (MQ=255)
               aGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGc                                                                                >  1:13911654/1‑96 (MQ=255)
                gCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATCCAAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGcc                                                                               <  1:1628279/96‑1 (MQ=255)
                 ccGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCt                                                                              <  1:13638414/96‑1 (MQ=255)
                 ccGGTGTCAGTACCGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCt                                                                              >  1:10990373/1‑96 (MQ=255)
                  cGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCtt                                                                             >  1:8143162/1‑96 (MQ=255)
                   ggTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCttt                                                                            >  2:9387817/1‑96 (MQ=255)
                   ggTGTCAGTACGGGCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCttt                                                                            >  1:13429711/1‑96 (MQ=255)
                    gtgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTa                                                                           <  1:2848984/96‑1 (MQ=255)
                     tgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTAt                                                                          <  2:13387854/96‑1 (MQ=255)
                       tCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTc                                                                        <  2:5572570/96‑1 (MQ=255)
                       tCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTc                                                                        <  1:8272127/96‑1 (MQ=255)
                        cAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCg                                                                       >  2:2826428/1‑96 (MQ=255)
                        cAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCg                                                                       <  2:6751235/96‑1 (MQ=255)
                         aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGa                                                                      >  2:5753090/1‑96 (MQ=255)
                           tgcTGTCGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCCGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATg                                                                    <  2:6364156/94‑1 (MQ=255)
                           tACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATg                                                                    <  2:6960899/96‑1 (MQ=255)
                            aCTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGc                                                                   >  1:11439947/1‑96 (MQ=255)
                             cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGTGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCa                                                                  <  2:5401069/96‑1 (MQ=255)
                             cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCa                                                                  <  2:4052810/96‑1 (MQ=255)
                             cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCa                                                                  <  1:14319992/96‑1 (MQ=255)
                               gTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAAt                                                                >  2:13821107/1‑96 (MQ=255)
                               gTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAAt                                                                >  2:9510995/1‑96 (MQ=255)
                               gTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAAGGACGCCTTTATTCGATGCGAt                                                                >  1:1310794/1‑96 (MQ=255)
                                 cGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAAttt                                                              <  2:5865234/96‑1 (MQ=255)
                                 cGAATTCGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAAttt                                                              >  2:11236265/1‑96 (MQ=255)
                                   aaTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTcc                                                            >  1:6495206/1‑96 (MQ=255)
                                   aaTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTcc                                                            >  1:4322587/1‑96 (MQ=255)
                                    aTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCa                                                           >  1:1370413/1‑96 (MQ=255)
                                     tttGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAt                                                          >  2:9231669/1‑96 (MQ=255)
                                      ttGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATa                                                         <  1:5161290/96‑1 (MQ=255)
                                         aTCGCTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTGTGCAATGACGCCTTTATTCGAGGCAAATTCCATAAtt                                                      >  2:13203219/1‑96 (MQ=255)
                                         aTCGCTTCTCGCCAATCGCTCTCAATCATTCCTGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAtt                                                      <  1:14120527/96‑1 (MQ=255)
                                          tCGCTTCTCGCCACTCGCTCTCGCTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAttt                                                     <  2:8714820/96‑1 (MQ=255)
                                           tccTTCACGCCACTCGGTCTCACTCATTCCAGCACGACCCGCCGGGGTCTAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtc                                                    <  1:9751883/94‑1 (MQ=255)
                                            tcTTCTCGCCACCCGCTCTGACTCATTCCCGCCCGCCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                                                   <  1:2405993/95‑1 (MQ=255)
                                             cTTCTCGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtctc                                                  <  2:14301248/96‑1 (MQ=255)
                                                 tcGCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTc                                              <  2:5304608/96‑1 (MQ=255)
                                                   gCCACTCGCTCTCAGTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGCCGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCaa                                            >  1:3489310/1‑96 (MQ=255)
                                                   gCCACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCaa                                            <  1:12977203/96‑1 (MQ=255)
                                                    ccACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCGGCAATGACGCCTTTATTCGATGCAGTTTCCATAATTTCTCGCTCAat                                           >  1:5588453/1‑96 (MQ=255)
                                                     cACTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAata                                          >  1:615935/1‑96 (MQ=255)
                                                       cTCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtt                                        <  1:9550936/96‑1 (MQ=255)
                                                        tCGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAttt                                       >  1:12549752/1‑96 (MQ=255)
                                                         cGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt                                      >  1:4766227/1‑96 (MQ=255)
                                                         cGCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt                                      <  2:4751836/96‑1 (MQ=255)
                                                          gCTCTCACTCATTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTg                                     >  2:2675467/1‑96 (MQ=255)
                                                              tcactcaTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAgg                                 <  1:3155653/96‑1 (MQ=255)
                                                                actcaTTCCAGCACGACCCGCCGGGGTCGAAGCATCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGc                               >  2:14057671/1‑96 (MQ=255)
                                                                 ctcaTACCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCt                              <  2:8305432/96‑1 (MQ=255)
                                                                  tcaTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtt                             <  2:10222213/96‑1 (MQ=255)
                                                                   caTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtta                            >  1:7626825/1‑96 (MQ=255)
                                                                   caTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtta                            <  1:4416945/96‑1 (MQ=255)
                                                                    aTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCttat                           <  1:9034478/96‑1 (MQ=255)
                                                                    aTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCttat                           >  2:3344827/1‑96 (MQ=255)
                                                                    aTTCCAGCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCttat                           <  2:2195615/96‑1 (MQ=255)
                                                                       tccagCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATCTTGTAGGGCttatta                         <  2:13008575/92‑1 (MQ=255)
                                                                         cagCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCttattact                       <  1:10553680/94‑3 (MQ=255)
                                                                          agCACGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAttt                      >  2:3138668/2‑96 (MQ=255)
                                                                            cACGACCCGCCGGGGTCGAAGCGTCTGCAATGGCGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAttttt                    >  1:6749025/1‑96 (MQ=255)
                                                                             aCGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAtttttt                   <  1:6612788/96‑1 (MQ=255)
                                                                             aCGACCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAtttttt                   <  2:8143183/96‑1 (MQ=255)
                                                                                aCCCGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTcc                >  2:3853471/1‑96 (MQ=255)
                                                                                 cccGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCg               <  2:3661156/96‑1 (MQ=255)
                                                                                 cccGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCg               <  1:8746918/96‑1 (MQ=255)
                                                                                 cccGCCGGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCg               <  2:11728908/96‑1 (MQ=255)
                                                                                  ccgccgGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGa              <  1:11711836/96‑1 (MQ=255)
                                                                                    gccgGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATGTTTTGTAGGGCTTATTATTTTTTTCCGAGc            >  2:7268005/1‑96 (MQ=255)
                                                                                     ccgGGTTCGAAGCGTCTGCAATGACGCCTTTATCCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGcc           <  2:7855854/96‑1 (MQ=255)
                                                                                     ccgGGGTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGcc           <  2:12327212/96‑1 (MQ=255)
                                                                                     ccgGGGTCGACGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGcc           <  2:10741712/96‑1 (MQ=255)
                                                                                       ggggTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGc         >  2:12482026/1‑96 (MQ=255)
                                                                                        gggTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCATTTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCa        <  1:8415912/96‑1 (MQ=255)
                                                                                        gggTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCgta        <  1:10056162/96‑3 (MQ=255)
                                                                                        gggTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCa        >  2:10466466/1‑96 (MQ=255)
                                                                                         ggTCGAAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCAt       <  2:6618985/96‑1 (MQ=255)
                                                                                                |                                                                                              
TACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAGG  >  NC_000913/3255519‑3255709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: