| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,007,907 | +GG | intergenic (+109/‑11) | pldB → / → b4555 | lysophospholipase L(2)/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,007,907 | 1 | . | G | 92.4% | 1490.0 / 97.5 | 411 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (11/20); new base G (194/185); total (206/205) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
| * | NC_000913 | 4,007,907 | 2 | . | G | 92.5% | 1476.4 / 97.5 | 412 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (11/20); new base G (195/186); total (206/206) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 466 total aligned reads displayed.
CAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCA > NC_000913/4007812‑4007999 || cAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgc < 1:13936788/96‑1 (MQ=255) aGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgcg > 1:9170417/1‑95 (MQ=255) aGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgcg > 2:13454191/1‑95 (MQ=255) aGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgcg < 2:7650713/96‑2 (MQ=255) aGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgcg > 2:6319483/1‑95 (MQ=255) ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑cg‑‑cgcggca > 1:10647694/1‑92 (MQ=255) gATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTtgtg < 2:6522727/96‑1 (MQ=255) gATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTtgtg > 2:3812326/1‑96 (MQ=255) aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTgtgt > 1:5757387/1‑96 (MQ=255) aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTgtgt > 1:677048/1‑96 (MQ=255) aTTTAGATGGCACGTTACTTTCTCCCCACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CGCACGG‑‑CATCAACTTTgtgt > 2:11067590/1‑96 (MQ=255) tttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGtt < 1:6906175/96‑1 (MQ=255) ttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGttt < 2:510673/96‑1 (MQ=255) tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTg > 2:2012610/1‑96 (MQ=255) gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCg < 1:7435694/96‑1 (MQ=255) aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCGAAGAAACTCTGAAGCTGCTCACCGCACG‑‑CGG‑‑CATCAACTTTTTGTTTGCgt > 2:9550185/1‑95 (MQ=255) aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGa < 1:3291766/96‑1 (MQ=255) tGGCACGTTACTTTCTCCCGACCCTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGAc < 2:10146201/96‑1 (MQ=255) ggCTCGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGAcc < 1:3019515/96‑1 (MQ=255) gCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGAGACCg > 1:10035831/1‑96 (MQ=255) cACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGGTTGCGACCgg > 2:13214107/1‑96 (MQ=255) aCGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTCCGACCGgt < 1:10490531/96‑1 (MQ=255) aCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTca < 1:13477494/96‑1 (MQ=255) cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcac < 2:1173964/96‑1 (MQ=255) cTTCCTCCCGCCCACCCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcac < 1:1587248/96‑1 (MQ=255) tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacc < 2:11961259/96‑1 (MQ=255) tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACAGGTCGTcacc > 2:10737264/1‑96 (MQ=255) ttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacca > 1:3614804/1‑96 (MQ=255) tctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacctc < 1:3418973/96‑3 (MQ=255) tctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcaccac < 2:8040438/96‑1 (MQ=255) ctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg > 1:11978648/1‑96 (MQ=255) cccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt < 2:362301/96‑1 (MQ=255) cccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt < 1:6431098/96‑1 (MQ=255) cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGa < 2:12841142/96‑1 (MQ=255) cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGa > 2:9696010/1‑96 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTgtt < 1:11080359/96‑3 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt > 2:7468423/1‑96 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt > 1:12558090/1‑96 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt < 1:13698000/96‑1 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt > 1:2880772/1‑96 (MQ=255) aCCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg < 1:4555227/96‑1 (MQ=255) ccATACGTTATCCCCTTACGCCAAAGAAACTCTTAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTCTGTGTATGCGACCGGTAGTCACCACGTTGAtgt > 1:14059528/1‑96 (MQ=255) ccATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCGGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt > 2:12633350/1‑96 (MQ=255) acaCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgttg < 1:7640426/94‑3 (MQ=255) tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgtgcg > 1:948533/1‑94 (MQ=255) tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg > 2:8916379/1‑96 (MQ=255) aCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTgggg < 2:6999684/96‑1 (MQ=255) gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCa > 2:4855583/1‑96 (MQ=255) ttATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaa > 1:423269/1‑96 (MQ=255) tATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa > 2:11373351/1‑96 (MQ=255) aTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAt > 2:14020539/1‑96 (MQ=255) ccccTTTCGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc < 1:11901876/96‑1 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAttt < 1:11332976/96‑2 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc < 1:3965248/96‑1 (MQ=255) ccccTGTCGCCAACGCCACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtcc < 1:14337827/96‑3 (MQ=255) cccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg < 1:707952/96‑1 (MQ=255) ccTTACGCCAAAGAAACTCTGAATCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc > 2:5879437/1‑96 (MQ=255) ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTGGTCACCACGGTGATGGGGGGCAAATTcgc > 1:6654952/1‑96 (MQ=255) ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc > 1:8559763/1‑96 (MQ=255) cTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgcg < 2:2619490/96‑1 (MQ=255) cTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgcg > 1:12322243/1‑96 (MQ=255) tACGCCAAAGAAACTCTGAAGCTGCTCCCCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt < 1:2450079/96‑1 (MQ=255) aCGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATa > 2:3371697/1‑96 (MQ=255) cGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa < 2:10456782/96‑1 (MQ=255) gCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt > 2:4425513/1‑96 (MQ=255) ccAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGGCCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGatcatc > 1:1303894/1‑96 (MQ=255) cAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt > 1:11187212/1‑96 (MQ=255) cAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt < 1:5656897/96‑1 (MQ=255) aaaGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg > 1:2255414/1‑96 (MQ=255) aGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga > 2:561310/1‑96 (MQ=255) aGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga < 1:8042831/96‑1 (MQ=255) aGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga > 2:3097664/1‑96 (MQ=255) aaaCTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgaga > 1:1710096/1‑96 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt < 1:4470007/96‑1 (MQ=255) aCTCTGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAtt < 1:7575301/96‑1 (MQ=255) ctctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa < 2:232194/96‑1 (MQ=255) ctctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa < 2:596874/96‑1 (MQ=255) tctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 2:1498281/1‑96 (MQ=255) tctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 2:14250057/1‑96 (MQ=255) tctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 2:12176886/1‑96 (MQ=255) tctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa > 2:7255294/1‑96 (MQ=255) ctGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTacg > 1:12164478/1‑94 (MQ=255) tGAAGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt > 2:9107312/1‑96 (MQ=255) aGCTGCTCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt < 2:4081057/96‑1 (MQ=255) gctgctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa < 2:774157/96‑1 (MQ=255) ctgctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTAc > 2:8166636/1‑96 (MQ=255) tgctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACa > 1:12676745/1‑96 (MQ=255) tgctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTATTACa > 2:10259756/1‑96 (MQ=255) gctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAt < 1:4831350/96‑1 (MQ=255) gctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAt > 2:8772318/1‑96 (MQ=255) gctCACCG‑‑CG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAt > 1:6192822/1‑96 (MQ=255) ccgcg‑‑cg‑‑cgG‑‑CATCACCTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTa < 1:9597363/93‑1 (MQ=255) ccgcg‑‑cg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTa > 2:8606432/4‑96 (MQ=255) cgcg‑‑cg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc < 2:13835113/94‑1 (MQ=255) cgcg‑‑cg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc < 2:13641310/94‑1 (MQ=255) cgcg‑‑cg‑‑cgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc < 1:13350197/94‑1 (MQ=255) cgag‑‑cg‑‑cgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc < 1:3880492/93‑1 (MQ=255) g‑‑cg‑‑cgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAccac < 1:11505142/96‑3 (MQ=255) g‑‑cg‑‑cgg‑‑CATCAACTTTATGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTc < 2:8318609/96‑1 (MQ=255) g‑‑cgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCa > 1:8717326/1‑96 (MQ=255) || CAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑CG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCA > NC_000913/4007812‑4007999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |