| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,051,170 | +C | intergenic (+172/+279) | hemN → / ← glnG | O2‑independent coproporphyrinogen III oxidase/GlnG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,051,170 | 1 | . | C | 99.5% | 1311.9 / ‑1.4 | 432 | intergenic (+172/+279) | hemN/glnG | O2‑independent coproporphyrinogen III oxidase/GlnG |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (234/196); total (235/197) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01 | |||||||||||
Only 100 of 497 total aligned reads displayed.
CGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCCATCTGAGCATGATGCCTGATGCGG‑CG‑TGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAG > NC_000913/4051074‑4051259 | cTGGGCAACAAAATCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTTCTCCGCATCAGG‑TATCTGAGCATGATGCCCGATgcgg‑cgct > 1:5586805/1‑94 (MQ=25) tGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATgcgg‑cgctg < 1:8142600/96‑4 (MQ=255) gggCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATgcgg‑cgctgg < 2:1697761/96‑5 (MQ=255) gggCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATgcgg‑cgctgg < 1:2124994/96‑5 (MQ=255) gCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTc < 2:7484651/96‑1 (MQ=25) caacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCAGATGCGG‑CGCTGGTcg > 1:12806736/1‑96 (MQ=25) aacaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTcgc > 2:7163069/1‑96 (MQ=25) accaaaCCTGTTGAAATTATTCCTTTTGTAGGCAGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTcgcg < 2:4569965/93‑1 (MQ=18) acaaAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTcgcg > 2:1156133/1‑96 (MQ=25) aaaaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTc > 2:4796935/1‑96 (MQ=25) aaaaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGACGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTc > 2:8835907/1‑96 (MQ=25) aaaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCt > 1:10952969/1‑96 (MQ=25) aaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCtt < 1:11261046/96‑1 (MQ=21) aaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCtt > 1:6199698/1‑96 (MQ=21) aaCCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGACtt < 2:10097625/96‑1 (MQ=21) aCCTGTTGGAATTATTGCTTTTGTAGGCCCGATAAAGCGGTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTa > 2:12802600/1‑96 (MQ=21) aCCTGTTGAAATTATTGCTATTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTa < 1:12671741/96‑1 (MQ=21) ccgTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATc > 1:11787317/3‑96 (MQ=21) tGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCa < 1:8664789/96‑1 (MQ=21) tGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGGCTTATCa > 2:9397403/1‑96 (MQ=21) gTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGGCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCACGTCTTATCAg > 2:2437722/1‑96 (MQ=18) gTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGTGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAg < 2:10169378/96‑1 (MQ=18) gTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAg < 2:4384064/96‑1 (MQ=18) gAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGcc > 1:9942932/1‑96 (MQ=18) aaTTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTa > 2:9074167/1‑96 (MQ=18) aaTTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTa < 1:4397947/96‑1 (MQ=18) ttattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACg < 1:13314449/96‑1 (MQ=18) ttattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACg < 1:6682916/96‑1 (MQ=18) tattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGa > 1:14292650/1‑96 (MQ=18) tattGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGa > 1:8431209/1‑96 (MQ=18) ttGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACt > 2:3538999/1‑96 (MQ=18) gCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGGCCC‑TGGTCGCGTCTTATCAGGCCTACGACttt > 2:14088940/1‑96 (MQ=18) cTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTtc > 1:2835339/1‑96 (MQ=18) tttGTAGGCCGGATAAGGCGTTTACGACGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGACTTATCAGGCCTACGACTTtctc > 2:600223/1‑96 (MQ=18) ttGTAGGTCAGATAAGGCGTTCACGCAGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTcc < 2:515326/96‑1 (MQ=17) ttGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTcc < 2:11672164/96‑1 (MQ=18) ttGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTcc < 2:851961/96‑1 (MQ=18) ttGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTcc < 2:13170458/96‑1 (MQ=18) tggTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTcc > 1:10054210/3‑96 (MQ=18) tGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCg < 2:11274579/96‑1 (MQ=18) tGTAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCg > 1:7849562/1‑96 (MQ=18) tAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCa > 1:3780284/1‑96 (MQ=18) tAGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCa < 2:5788783/96‑1 (MQ=18) aGGGCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCAt < 2:6435939/96‑1 (MQ=18) aGGCCGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATTCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCAt > 2:10407579/1‑96 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCg < 2:11113895/96‑1 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCg > 2:9875307/1‑96 (MQ=18) ctgATAAGGCGTTTCCGCCGCATCAGG‑CATCTGAGCATGATGCGTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTCCTCCGCATCCgg < 1:12329607/94‑1 (MQ=18) cGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCgg > 1:3082599/1‑96 (MQ=18) cGGATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCgg > 1:10428584/1‑96 (MQ=18) cGGATAAGGCGTTTACGCCGCATCAGG‑CAGCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCATGCCTACGACTTTCTCCGCATCCgg > 1:12053958/1‑96 (MQ=18) ggATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGc > 2:3736126/1‑96 (MQ=18) ggATAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGc < 2:4947944/96‑1 (MQ=18) aTAAGGCGTTTCCGCCGCATCAGG‑CATCTGAGCATGATCCCTGATGCGG‑CGCTGGTCGAGTCTTACCAGGCCTACGACTTCCTCCGCATCCGGCAt < 2:6245505/96‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCAt > 2:11949203/1‑96 (MQ=21) ggCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaac < 2:8255335/96‑1 (MQ=21) ggCGTTTACGCCGCATCAGG‑CATCGGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaac < 2:13796885/96‑1 (MQ=21) gCGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaaca > 2:4163708/1‑96 (MQ=21) gCGGTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaaca > 1:11554322/1‑96 (MQ=21) cGTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaacaa < 1:5103545/96‑1 (MQ=21) ggttACGCCGCATCAGGCCTTC‑GATCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTCTGACTTACTCCGTATCCGGCATAaacacc < 1:6801266/94‑3 (MQ=18) gTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaacaac < 2:10567132/96‑1 (MQ=21) gTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaacaac > 1:467221/1‑96 (MQ=25) gTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaacaac > 1:9793055/1‑96 (MQ=25) gTTTACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGGCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAaacaac > 1:1563265/1‑96 (MQ=21) tttACGTCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACg > 1:1773399/1‑96 (MQ=25) tttACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACg > 1:8975102/1‑96 (MQ=25) ttccgccgcATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGa < 2:12091138/93‑1 (MQ=25) tACGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAg > 2:13541516/1‑96 (MQ=25) aCGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGc < 2:11748707/96‑1 (MQ=25) aCGCCGCATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGc > 2:2973071/1‑96 (MQ=25) ccgcATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTc > 1:5501287/1‑96 (MQ=25) cgcATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCa < 1:2505444/96‑1 (MQ=37) cgcATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCa > 2:7844199/1‑96 (MQ=37) gcATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACATCGAGCTTCAg > 2:10716575/1‑96 (MQ=25) cATCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGc < 1:8329822/96‑1 (MQ=37) aTCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCt < 2:1261696/96‑1 (MQ=37) aTCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCt > 1:13584704/1‑96 (MQ=37) tCAGG‑CATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGACCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTa < 2:12900562/96‑1 (MQ=38) caggcATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTaa > 1:6399911/5‑96 (MQ=38) aggcATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTaaa < 1:3410852/93‑1 (MQ=255) ggcATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAAc < 2:10879538/94‑1 (MQ=255) cATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAActg < 1:10545781/96‑3 (MQ=255) cATCTGAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCACTTAAACAg > 2:6892525/1‑96 (MQ=37) gAGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCaa > 2:7761875/1‑96 (MQ=255) aGCATGATGCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAAt > 2:8114994/1‑96 (MQ=255) gaatgatgCCTGATGCGG‑GGCTGGTCGCGTCTTATCAGGTCTACGACTTTCTCCGCATCCGGCATAAACAACTAGCTTCAGCTAAACAGCCCAATc > 1:10149402/3‑96 (MQ=38) atgatgCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAACCCcatcat > 1:14088509/1‑96 (MQ=38) tgatgCCTGCTGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAAAGAGCTTCAGCTAAACAGCCCAATCAtt < 1:3816914/96‑1 (MQ=38) tgatgCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCTGCTAAACAGCCCAATCAtt < 2:12356870/96‑1 (MQ=38) tgatgCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCAtt > 2:11379189/1‑96 (MQ=255) atgCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGc > 1:4091096/1‑96 (MQ=255) tgCCTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCg < 2:5640148/96‑1 (MQ=255) ccTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGc < 1:7217052/96‑1 (MQ=255) ccTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGc > 2:3407176/1‑96 (MQ=255) ccTGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGc < 1:1305780/96‑1 (MQ=255) tGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGcac < 1:9552471/96‑1 (MQ=255) tGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGcac < 2:2102586/96‑1 (MQ=255) tGATGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGcac > 1:13874040/1‑96 (MQ=255) tGCGG‑CGCTGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGcacaca < 2:14292650/96‑1 (MQ=255) | CGCTGGGCAACAAAACCTGTTGAAATTATTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCAGGCCATCTGAGCATGATGCCTGATGCGG‑CG‑TGGTCGCGTCTTATCAGGCCTACGACTTTCTCCGCATCCGGCATAAACAACGAGCTTCAGCTAAACAGCCCAATCATTGCGGCACACAG > NC_000913/4051074‑4051259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |