| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,099,661 | (A)5→6 | intergenic (‑19/+164) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,099,656 | 1 | . | A | 99.3% | 2318.4 / 3.6 | 578 | intergenic (‑14/+169) | yggN/b2959 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base A (298/275); total (300/278) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
Only 100 of 642 total aligned reads displayed.
GCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA > NC_000913/3099561‑3099746 | cgTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑a > 1:12376972/1‑96 (MQ=255) cgTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑a < 1:5766354/96‑1 (MQ=255) gTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aa > 2:3333888/1‑96 (MQ=255) gTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aa > 1:5917666/1‑96 (MQ=255) gTGAAGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCCTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aa > 1:12637589/1‑96 (MQ=255) atGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aa > 1:11335423/2‑96 (MQ=255) tGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa < 2:3833324/96‑1 (MQ=255) aCGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaa < 2:6234459/96‑1 (MQ=255) cGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaa < 2:2358350/96‑2 (MQ=255) gCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaat > 2:7251182/1‑94 (MQ=255) cTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaatc > 2:4810519/1‑93 (MQ=255) tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaatca > 2:9099743/1‑92 (MQ=255) tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaatca > 1:8370679/1‑92 (MQ=255) cTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGcc < 2:924561/96‑1 (MQ=255) cTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGcc > 2:1391705/1‑96 (MQ=255) tGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCa < 2:8341731/96‑1 (MQ=255) gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGAATCATAGTCTTCCCTCAAGAAAAAA‑TAAGGCCAGCAtt > 1:13546081/1‑96 (MQ=255) tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCAttt < 1:3361142/96‑1 (MQ=255) cGGCGTGAGCGGTCATTGCCGTCCCTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTg < 2:12630028/96‑1 (MQ=255) cGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTg < 1:5066528/96‑1 (MQ=255) cGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTg > 2:11280015/1‑96 (MQ=255) cGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTg > 2:3972679/1‑96 (MQ=255) gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTgg > 2:10678251/1‑96 (MQ=255) gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTgg > 1:5298558/1‑96 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGc > 2:3224809/1‑96 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGc < 2:5403207/96‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGcc < 1:3229344/96‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGcc < 2:13054344/96‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGcc > 2:1095096/1‑96 (MQ=255) aGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGccc < 2:3731154/96‑1 (MQ=255) gCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGcccc < 2:793024/96‑1 (MQ=255) ggTCATTGCCGTCCCTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCac < 1:13811998/96‑2 (MQ=255) ggTCATTGCCGTCACTGCAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAg < 1:8947673/96‑1 (MQ=255) ggTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAg < 2:11895158/96‑1 (MQ=255) tCATTGCCGTCACTGAAAGAGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAt > 2:12361090/1‑96 (MQ=255) cATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAtt < 2:13791054/96‑1 (MQ=255) cATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAtt > 2:9575592/1‑96 (MQ=255) cATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAtt > 1:4814949/1‑96 (MQ=255) aTTGCCGTCACTTAAAGGTCTGCCGCCAGCAGAATTTTTCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTg < 1:1779477/96‑1 (MQ=255) aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTg > 2:5582016/1‑96 (MQ=255) ccGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATaa < 2:11761495/96‑1 (MQ=255) ccGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAAAGTCAGGCCAGCATTTGCTGGCCCCAGATTGATaa < 2:10259552/96‑1 (MQ=255) catCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAAc > 1:7352257/3‑96 (MQ=255) cGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAAc > 2:6974683/1‑96 (MQ=255) tCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑GCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaa < 2:12087708/96‑1 (MQ=255) tGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCATCAAGAAAAAA‑TCAGGCCAGCATTTGATGGCCCCAGATTGATAACAAAGTa > 1:13023832/1‑96 (MQ=255) gctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt < 1:4020130/96‑1 (MQ=255) gctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt < 2:135872/96‑1 (MQ=255) gctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt < 1:10425482/96‑1 (MQ=255) ctgcCGCCAGCATCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtttt < 1:8731767/96‑1 (MQ=255) ctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtttt < 2:5144870/96‑1 (MQ=255) tgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc < 2:11072975/96‑1 (MQ=255) tgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc < 1:6659534/96‑1 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc > 1:4383301/1‑96 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc > 2:7645689/1‑96 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc < 1:11942417/96‑1 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt < 1:10085705/96‑1 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGACAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt > 1:14300773/1‑96 (MQ=255) ccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc < 2:13333807/96‑1 (MQ=255) cagcagCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc > 2:10493464/1‑96 (MQ=255) cagcagCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc < 2:2090357/96‑1 (MQ=255) cagcagCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc > 2:4576517/1‑96 (MQ=255) agcagcATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg > 1:6152893/1‑96 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa > 1:3609920/1‑96 (MQ=255) agcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt < 1:297803/96‑1 (MQ=255) gcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg > 1:2154638/1‑96 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGTCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgc < 2:8531165/96‑1 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgc > 1:1509426/1‑96 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgc > 2:196721/1‑96 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcg < 1:9638938/96‑1 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGTTGGGCCCAGATTGATTACAAAGTACGCGTTTTCCATGCCGGATgcgg > 2:65100/1‑96 (MQ=255) ttGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggcg < 2:6635424/96‑1 (MQ=255) tGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGt < 1:3763968/96‑1 (MQ=255) tGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGt < 2:1431007/96‑1 (MQ=255) gcgcATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTa < 2:8097086/96‑1 (MQ=255) cgcATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaa > 1:7811270/1‑96 (MQ=255) atcntAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca > 2:876535/1‑96 (MQ=255) atcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca > 1:1278674/1‑96 (MQ=255) atcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca < 1:4513831/96‑1 (MQ=255) atcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca < 2:1625084/96‑1 (MQ=255) atcatAGTCTTCCCGCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTCAaca > 1:10015250/1‑96 (MQ=38) catAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAcc > 2:29610/1‑96 (MQ=255) tAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAccct < 1:10678251/96‑3 (MQ=255) tAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt < 1:7509434/96‑1 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTa > 1:274755/1‑96 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAGGCGGCGTAGACACCTTa > 1:14021379/1‑96 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑GCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGTCGTAAACACCTTa > 1:9395102/1‑96 (MQ=255) tCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATc < 2:4201756/96‑1 (MQ=255) tCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATc > 2:1820099/1‑96 (MQ=255) ttCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATccc < 1:11076924/96‑1 (MQ=255) ttCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATccc < 2:11547571/96‑1 (MQ=255) tCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg < 1:8605224/96‑1 (MQ=255) cccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc < 1:5434172/96‑1 (MQ=255) cccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc < 2:5917666/96‑1 (MQ=255) cccTCAAGAAAAAA‑GCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc < 1:2488247/96‑1 (MQ=255) ccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGcc > 1:11702939/1‑96 (MQ=255) ccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGcc > 1:8050739/1‑96 (MQ=255) cTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCt > 1:6387416/1‑96 (MQ=255) cTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCt < 1:6982889/96‑1 (MQ=255) tCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTa > 2:2758662/1‑96 (MQ=255) | GCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA > NC_000913/3099561‑3099746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |