BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	547,835	+G	coding (255/261 nt)	b4507 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	547,831	1	.	G	98.1%	1616.9 / 15.6	423	coding (251/261 nt)	b4507	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/7); new base G (225/190); total (226/197)
Fisher's exact test for biased strand distribution p-value = 2.78e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 469 total aligned reads displayed.

GGAGATGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑G‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTGGTGGTT  >  NC_000913/547736‑547921

 gagaTGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGCGCGAAAGATGAAGCGCAGGCACTGGCAATACTGGG‑GCA‑g                                                                                            <  1:12630180/96‑1 (MQ=255)

  agaTGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑g‑g                                                                                          <  2:1060164/96‑1 (MQ=255)

   gaTGACCGGACCCATGAAAGGGCCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑g‑gg                                                                                         <  2:10963062/96‑1 (MQ=255)

      gACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑G‑GGGaa                                                                                      <  1:11031930/96‑1 (MQ=255)

      gACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑CCA‑g‑gggga                                                                                      <  1:12971924/96‑3 (MQ=255)

       aCCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑g‑ggggaa                                                                                     <  1:981700/96‑4 (MQ=255)

              ccATGAAAGGGGCGTGCGT‑GGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACtt                                                                              <  1:3746143/96‑1 (MQ=255)

               cATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACtt                                                                              <  1:8009069/96‑1 (MQ=255)

               cATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACtt                                                                              >  1:12034528/1‑96 (MQ=255)

                aTGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTc                                                                             >  2:1695192/1‑96 (MQ=255)

                aTGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTc                                                                             >  2:7335826/1‑96 (MQ=255)

                aTGAAAGGGGCGGGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTc                                                                             <  1:4506273/96‑1 (MQ=255)

                 tGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCa                                                                            <  1:7349448/96‑1 (MQ=255)

                  gAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCAt                                                                           <  1:13381974/96‑1 (MQ=255)

                    aaGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTc                                                                         >  2:8768638/1‑96 (MQ=255)

                     aGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTcc                                                                        >  1:9426341/1‑96 (MQ=255)

                     aGGGGCGTGCGCGAGCGCATGTCTGTTCGAAGGTTCGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTcc                                                                        <  1:10019370/96‑1 (MQ=255)

                      ggggCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCt                                                                       >  1:13619527/1‑96 (MQ=255)

                       gggCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCtt                                                                      <  2:8232871/96‑1 (MQ=255)

                       gggCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCtt                                                                      <  2:3752856/96‑1 (MQ=255)

                         gcgtgcgtGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGt                                                                    >  1:7260460/1‑96 (MQ=255)

                         gcgtgcgtGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGt                                                                    <  2:7168509/96‑1 (MQ=255)

                          cgtgcgtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGACATG‑G‑GGGAAGTAAACTACATTCCTTGTc                                                                   >  1:12921949/1‑96 (MQ=255)

                          cgtgcgtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTc                                                                   >  1:171671/1‑96 (MQ=255)

                          cgtgcgtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTc                                                                   >  2:2294464/1‑96 (MQ=255)

                           gtgcgtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCa                                                                  >  1:14261988/1‑96 (MQ=255)

                              cgtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGGGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGACACCa                                                               >  2:7717071/1‑96 (MQ=255)

                               gtgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCAt                                                              <  2:8957666/96‑1 (MQ=255)

                               gtgGGCGCATGTCTGTTAGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCAt                                                              <  1:3428948/96‑1 (MQ=255)

                                tgGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTGACCAtg                                                             >  2:12943442/1‑96 (MQ=255)

                                 gggCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCAtgt                                                            >  2:7876796/1‑96 (MQ=255)

                                 gggCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCAtgt                                                            >  1:1332752/1‑96 (MQ=255)

                                     gcATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAAt                                                        >  2:6134445/1‑96 (MQ=255)

                                     gcATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAAt                                                        >  2:6685909/1‑96 (MQ=255)

                                     gcATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAAt                                                        <  1:1371686/96‑1 (MQ=255)

                                      cATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATg                                                       >  2:5697725/1‑96 (MQ=255)

                                       aTGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGc                                                      >  2:8381634/1‑96 (MQ=255)

                                       aTGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGc                                                      >  2:1179711/1‑96 (MQ=255)

                                        tGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGcc                                                     <  1:8629949/96‑1 (MQ=255)

                                         gTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCg                                                    >  2:12682219/1‑96 (MQ=255)

                                          tCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGt                                                   <  1:13180762/96‑1 (MQ=255)

                                          tCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGt                                                   <  1:5330503/96‑1 (MQ=255)

                                          tCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGt                                                   <  1:7476942/96‑1 (MQ=255)

                                          tCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGt                                                   <  2:547048/96‑1 (MQ=255)

                                           cTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCgcc                                                  <  1:10771914/96‑3 (MQ=255)

                                           cTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTc                                                  >  2:9292136/1‑96 (MQ=255)

                                           cTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTc                                                  <  2:9770347/96‑1 (MQ=255)

                                           cTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTc                                                  >  1:2508188/1‑96 (MQ=255)

                                                 gAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCa                                            <  1:2697413/96‑1 (MQ=255)

                                                 gAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCa                                            >  2:399306/1‑96 (MQ=255)

                                                 gAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCa                                            <  2:3534514/96‑1 (MQ=255)

                                                  aaGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCaa                                           >  1:4812114/1‑96 (MQ=255)

                                                   aGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAAt                                          >  1:14032439/1‑96 (MQ=255)

                                                    ggTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATg                                         >  1:5012377/1‑96 (MQ=255)

                                                     gTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATgg                                        >  2:10079057/1‑96 (MQ=255)

                                                     gTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATgg                                        >  2:10841861/1‑96 (MQ=255)

                                                     gTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAAGGCCGTAGGGCCAATgg                                        >  1:13970490/1‑96 (MQ=255)

                                                       tGGGCGAAAGATTAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGc                                      <  1:5559727/96‑1 (MQ=255)

                                                       tGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGc                                      <  2:6752679/96‑1 (MQ=255)

                                                       tGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGc                                      <  2:12007438/96‑1 (MQ=255)

                                                       tGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGc                                      <  1:688678/96‑1 (MQ=255)

                                                        gggCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCg                                     >  2:12289572/1‑96 (MQ=255)

                                                        gggCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCg                                     >  1:2965097/1‑96 (MQ=255)

                                                          gCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGt                                   <  2:13747853/96‑1 (MQ=255)

                                                             aaaGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTAtt                                >  1:7113659/1‑96 (MQ=255)

                                                             aaaGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTAtt                                <  2:13428288/96‑1 (MQ=255)

                                                              aaGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTa                               <  1:8569089/96‑1 (MQ=255)

                                                               aGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTAc                              >  1:14116710/1‑96 (MQ=255)

                                                                gATGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTaat                             <  2:7565699/96‑3 (MQ=255)

                                                                 aTGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACtt                            >  2:143372/1‑96 (MQ=255)

                                                                 aTGAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACtt                            <  2:11416004/96‑1 (MQ=255)

                                                                   gAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCt                          <  2:1895373/96‑1 (MQ=255)

                                                                   gAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCt                          <  1:3940186/96‑1 (MQ=255)

                                                                   gAAGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCt                          <  2:4907463/96‑1 (MQ=255)

                                                                    aaGCGCAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTg                         <  2:13288842/96‑1 (MQ=255)

                                                                      gcgcAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGcc                       >  2:4253387/1‑96 (MQ=255)

                                                                       cgcAGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCa                      >  1:9680920/1‑96 (MQ=255)

                                                                        gaaGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAg                     >  1:4372269/3‑96 (MQ=255)

                                                                          aGGCGCTGGCAGTACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGTATGCTGGCGGGCCTATGGGCGGTATTACTTCTGCCAGTa                   <  1:10462820/96‑1 (MQ=255)

                                                                          aGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTa                   <  1:8185537/96‑1 (MQ=255)

                                                                          aGGCGCTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTa                   >  2:2810781/1‑96 (MQ=255)

                                                                           gtcgcTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTAt                  >  1:11678176/3‑96 (MQ=255)

                                                                            gcgcTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATg                 <  2:2353268/96‑1 (MQ=255)

                                                                             cgcTGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGc                >  1:7642038/1‑96 (MQ=255)

                                                                               cTGGCAATACTGGA‑GCA‑GTGGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCg              <  1:6315680/96‑1 (MQ=255)

                                                                                tGGCAATACTGGA‑GCAGG‑GGGAAGTGACCTTCATTCCTTGTCCCCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGa             <  2:3239562/96‑1 (MQ=255)

                                                                                tGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGa             >  1:1019564/1‑96 (MQ=255)

                                                                                tGGCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGGATGACTTCTGCCAGGATGCCGa             >  1:2264759/1‑96 (MQ=255)

                                                                                 ggCAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGAt            <  1:10683164/96‑1 (MQ=255)

                                                                                   cAATACTGGA‑GCAGG‑GGGAAGTGACCTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGc          <  2:4667382/96‑1 (MQ=255)

                                                                                   cAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGc          >  2:5297724/1‑96 (MQ=255)

                                                                                   cAATACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGc          >  1:5818946/1‑96 (MQ=255)

                                                                                    aaTACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCt         >  2:7026680/1‑96 (MQ=255)

                                                                                    aaTACTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCt         <  2:9599971/96‑1 (MQ=255)

                                                                                       aCTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCtggt      >  2:628939/1‑96 (MQ=255)

                                                                                        cTGGA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGACGATGCttgtg     >  1:8316966/1‑96 (MQ=255)

                                                                                          ggA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTggtggt   >  1:1510763/1‑96 (MQ=255)

                                                                                          ggA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTggtggt   <  1:9055160/96‑1 (MQ=255)

                                                                                           gA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTGGTGGtt  <  1:6571193/96‑1 (MQ=255)

                                                                                           gA‑GCAGG‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGGATTACTTCTGCCAGTATGCCGATGCTGGTGGtt  >  2:2600256/1‑96 (MQ=255)

GGAGATGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGA‑GCA‑G‑GGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTGGTGGTT  >  NC_000913/547736‑547921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`