| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,237,242 | +C | intergenic (+55/‑342) | ygjT → / → ygjU | putative transport protein/putative transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,237,240 | 1 | . | C | 99.3% | 1095.9 / ‑1.1 | 300 | intergenic (+53/‑344) | ygjT/ygjU | putative transport protein/putative transport protein |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (243/55); total (245/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 383 total aligned reads displayed.
CGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑T‑CCTCT‑CC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACG > NC_000913/3237145‑3237329 | ccTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑cc < 1:242168/96‑1 (MQ=255) cTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑ccc < 1:10055899/96‑2 (MQ=255) tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑ccct > 2:9334292/1‑94 (MQ=255) tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑ccct > 1:1642041/1‑94 (MQ=255) ggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑ccctct > 1:7994527/1‑92 (MQ=255) ggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTtc‑t‑ccctct < 2:3603676/96‑5 (MQ=255) ggTGAATTATCGGCATGATAAGCAGCGGGGTGGACAATTTTTAATCTGCCTAAGCCGTGTACCCTGCCATTAACATGAGCACCGTTTtc‑t‑ccctct < 2:2266817/96‑5 (MQ=255) tGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cc < 1:11673577/96‑1 (MQ=255) tGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTAATTAACATGAGCACCGTTTTc‑tccctct‑cc < 1:3958653/96‑1 (MQ=255) gAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccc > 2:12066437/1‑95 (MQ=255) aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccct > 1:9932373/1‑94 (MQ=255) aTTATCGGCATGATAAGCAGCGGGGTGGGTAATTTTTAATCTGCCTAAGCCGAGTACCCTGTCATTAACATGAGCACCGTTTTcgc‑cctct‑ccctt > 1:3618904/1‑93 (MQ=255) aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTTATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccctt > 2:10286066/1‑93 (MQ=255) aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccctt < 2:13899332/96‑4 (MQ=255) aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccctt > 2:1489466/1‑93 (MQ=255) ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cccttc < 2:7468834/96‑5 (MQ=255) tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAg < 1:2927050/96‑1 (MQ=255) ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAggg > 2:6291020/1‑96 (MQ=255) ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAggg < 2:7771286/96‑1 (MQ=255) gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCCCCGTTTTC‑TCCCTCTCCC‑TTCCAGGga < 1:7021107/96‑1 (MQ=255) gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGga > 2:6794763/1‑96 (MQ=255) gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGga < 2:3458687/96‑1 (MQ=255) gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGga < 1:11987371/96‑1 (MQ=255) gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGATTTC‑TCCCTCTCCC‑TTCCAGGga > 1:12540179/1‑96 (MQ=255) cATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGgag > 1:4329311/1‑96 (MQ=255) aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGgaga < 2:9694216/96‑1 (MQ=255) aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGgaga > 1:13982061/1‑96 (MQ=255) aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGgaga > 2:8755168/1‑96 (MQ=255) aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGATTTC‑TCCCTCTCCC‑TTCCAGGgaga > 1:3504864/1‑96 (MQ=255) tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGagag < 1:2102281/96‑1 (MQ=255) gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGagagt < 1:11441608/96‑2 (MQ=255) gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAgg > 2:13633555/1‑96 (MQ=255) tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGt < 1:2987579/96‑1 (MQ=255) aaGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTc < 1:10585652/96‑1 (MQ=255) aaGCAGCGGGGCGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAggggc < 1:7373353/96‑3 (MQ=255) agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGtgg < 1:10283399/96‑3 (MQ=255) agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑g < 2:5985938/96‑1 (MQ=255) agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGGTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑g > 2:12256325/1‑96 (MQ=255) cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑ggg < 1:9586873/96‑1 (MQ=255) cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑ggg > 1:1546452/1‑96 (MQ=255) cagcGGGGGGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑ggg > 1:2674733/1‑96 (MQ=255) gcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGTGAGAGGGTC‑GTGGt > 2:2087077/1‑96 (MQ=255) gcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGt > 2:1779562/1‑96 (MQ=255) cGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTg > 1:892947/1‑96 (MQ=255) ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGa > 2:7119232/1‑96 (MQ=255) ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGa > 2:8156547/1‑96 (MQ=255) gggTGGATAATTTTTAATCTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAg < 2:4980508/96‑1 (MQ=255) ggATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTa > 2:2585079/1‑96 (MQ=39) gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTaa > 2:4022385/1‑96 (MQ=39) gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTaa > 2:5863935/1‑96 (MQ=39) aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAAt > 1:7727827/1‑96 (MQ=38) aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAAt > 1:8566980/1‑96 (MQ=38) aaTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGGAAttt > 1:9692692/1‑96 (MQ=38) aTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTCGGGGGGGGGGGTAAttt > 2:9774314/1‑96 (MQ=255) aTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGTAAtttt > 1:304455/1‑96 (MQ=255) tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTACC‑TTCCAGAGAGAGGGTC‑GGGGTGTGGGTAATTCTTCgaa > 1:5471741/1‑94 (MQ=255) aaTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCAc > 2:5230512/1‑96 (MQ=38) aaTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCAc > 2:6691622/1‑96 (MQ=38) gtCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGAC‑GGGCAGAGGGTAATTTTTCGCAcc > 1:13099461/2‑96 (MQ=37) accTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGGC‑GGGGTGAGGGTAATTTTTCGCAcc > 1:14248572/3‑96 (MQ=37) aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCAcc > 1:9233321/1‑96 (MQ=38) cTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGa > 2:14230103/1‑96 (MQ=38) cTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGTAATTTTTCGCACCGa > 2:12484799/1‑96 (MQ=38) gCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATg > 1:8349236/1‑96 (MQ=38) ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGc > 1:5816023/1‑96 (MQ=38) cgaaGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCt > 1:11047373/3‑96 (MQ=38) cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATgat > 1:12878168/1‑94 (MQ=38) cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGTAATTTTTCGCACAGATGCt > 2:13782328/1‑96 (MQ=38) tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGGGGGGAAATTTTTGCACCGATGCTg > 2:11472137/1‑96 (MQ=255) tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGTAATTTTTCGCACCGATGCTg > 1:13277032/1‑96 (MQ=38) aaGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTgg > 2:10063649/1‑96 (MQ=38) aaGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGGAATTTTTCGCACCGATGCTgg > 2:5629957/1‑96 (MQ=38) aGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGc > 2:11756673/1‑96 (MQ=38) aGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGc > 2:2852965/1‑96 (MQ=38) ccGTGTACCCTGTGATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt > 1:13461527/1‑96 (MQ=37) ccGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt > 2:10921841/1‑96 (MQ=38) ccGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt > 2:4353251/1‑96 (MQ=38) gtACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc > 1:3831821/1‑96 (MQ=38) gtACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAAGGTC‑GGGGAGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc > 1:6534785/1‑96 (MQ=38) tACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcc > 2:13513317/1‑96 (MQ=38) aCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc > 1:6625466/1‑96 (MQ=37) cccTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACAGATGCTGGCCTGTTcccc > 1:4132621/1‑96 (MQ=37) gTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCTccc > 1:5605463/1‑94 (MQ=37) gTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGGTCCCCTCAc > 2:8455256/1‑96 (MQ=37) gTCATTAACATGAGCACCGTTTTC‑TCCCTCT‑CCATTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc > 2:14063333/1‑96 (MQ=37) cATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAccc > 2:8337554/1‑96 (MQ=25) cATTAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGGAATTTTTCGCACCGATGCTGGCCTGTTcccccccccc > 2:3042409/1‑96 (MQ=25) tAACATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTaa > 2:10541147/1‑96 (MQ=21) aCATGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCCCCCTAAcc > 1:1183435/1‑96 (MQ=21) aTGAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCct > 1:6078714/1‑96 (MQ=21) gAGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctct > 1:9076988/1‑96 (MQ=18) aGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTGCCCCGACCCCCAcccctct > 1:4977669/1‑92 (MQ=21) aGCACCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCtctc > 2:5721885/1‑96 (MQ=18) aCCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCCTACCCTAAACCTCTcccc > 2:10781248/1‑96 (MQ=21) aCCGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTCACCCTCTcccc > 1:8165109/1‑96 (MQ=18) ccGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCTCACCCTAACCCTCTCCCCa > 2:5363445/1‑96 (MQ=18) ccGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGGGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCCCCCCCTAAACCTCTCCCCa > 2:13141917/1‑96 (MQ=18) acGTTTTC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCa > 1:13754355/2‑96 (MQ=18) gctttC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCCCCCTAACCCTCTCCCCaaa > 1:10685367/3‑96 (MQ=17) ttttC‑TCCCTCTCCC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCCCCCCCCCTCCCCCTCCCCcaaa > 1:680229/1‑95 (MQ=12) | CGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑T‑CCTCT‑CC‑TTCCAGGGAGAGGGTC‑GGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACG > NC_000913/3237145‑3237329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |