BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	269765 =	NA (NA)	671 (1.160)	178/190	0.0	98.5%	coding (300/405 nt)	yi91a	hypothetical protein
*	?	NC_000913	= 370983	10 (0.020)	671 (1.160)	178/190	0.0	98.5%	coding (536/882 nt)	mhpC	2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 523 total aligned reads displayed.

GCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAG  >  NC_000913/269670‑269857

gCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACt                                                                                              >  2:8579771/1‑96 (MQ=255)

 ccTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTg                                                                                             <  2:1863884/96‑1 (MQ=255)

 ccTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTg                                                                                             >  1:1399738/1‑96 (MQ=255)

  cTCCCCCATTACCCCGGAACAAATTGAAATCCGCGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGt                                                                                            <  2:2178434/96‑1 (MQ=255)

   tCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTa                                                                                           >  1:4620705/1‑96 (MQ=255)

    cccccATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAg                                                                                          <  1:11322848/96‑1 (MQ=255)

      cccATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGAt                                                                                        <  2:6235938/96‑1 (MQ=255)

       ccATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGAtt                                                                                       >  1:1895922/1‑96 (MQ=255)

        cATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTc                                                                                      >  2:13289534/1‑96 (MQ=255)

            aCCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAAtt                                                                                  >  2:3222916/1‑96 (MQ=255)

            aCCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAAtt                                                                                  >  1:810621/1‑96 (MQ=255)

            aCCACGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAAtt                                                                                  <  2:6423354/96‑1 (MQ=255)

             ccccGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTg                                                                                 <  1:714732/96‑1 (MQ=255)

             ccccGGAACAAAGTGAAATCCGTAAGATCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTg                                                                                 <  1:10080757/96‑1 (MQ=255)

              cccGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTgg                                                                                >  1:7025330/1‑96 (MQ=255)

               ccGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGt                                                                               <  1:12509994/96‑1 (MQ=255)

               ccGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGt                                                                               <  2:9088144/96‑1 (MQ=255)

               ccGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGCATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGt                                                                               >  1:13014664/1‑96 (MQ=255)

                cGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTc                                                                              <  2:5704513/96‑1 (MQ=255)

                cGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTc                                                                              <  2:13087367/96‑1 (MQ=255)

                cGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTc                                                                              <  2:3532293/96‑1 (MQ=255)

                 ggAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCa                                                                             >  2:6843623/1‑96 (MQ=255)

                  gAACAAATTGAAATCCGTGAGCTCAGGAAAAAGATACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCaa                                                                            >  2:6671815/1‑96 (MQ=255)

                   aaCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc                                                                           >  1:12852446/1‑96 (MQ=255)

                   aaCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc                                                                           <  2:1651632/96‑1 (MQ=255)

                   aaCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc                                                                           <  1:8207894/96‑1 (MQ=255)

                     cAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGc                                                                         <  1:9935736/96‑1 (MQ=255)

                          tGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAg                                                                    <  2:5970274/96‑1 (MQ=255)

                            aaaTCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGtt                                                                  >  2:9506432/1‑96 (MQ=255)

                             aaTCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTa                                                                 <  2:4097050/96‑1 (MQ=255)

                              aTCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAt                                                                >  2:2485649/1‑96 (MQ=255)

                               tCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTTGATTCAATTGGTCAACGCAACAGTTAtg                                                               >  1:12249226/1‑96 (MQ=255)

                               tCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtg                                                               <  1:1098640/96‑1 (MQ=255)

                                   tGAGCTCAGGAAAAAGCTACAGCGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaa                                                           <  1:9262705/96‑1 (MQ=255)

                                      gCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAAc                                                        <  1:8565743/96‑1 (MQ=255)

                                      gCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAAc                                                        >  1:6395891/1‑96 (MQ=255)

                                         cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATg                                                     >  2:5010150/1‑96 (MQ=255)

                                         cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATg                                                     >  2:10805906/1‑96 (MQ=255)

                                         cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATg                                                     >  1:2320235/1‑96 (MQ=255)

                                         cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATg                                                     >  1:3690692/1‑96 (MQ=255)

                                          aGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGTTCAACGCAACAGTTATGTGAAAACATgg                                                    <  1:5609577/96‑1 (MQ=255)

                                           ggAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATggg                                                   >  1:3898982/1‑96 (MQ=255)

                                             aaaaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGt                                                 >  1:1690908/1‑96 (MQ=255)

                                              aaaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt                                                <  1:2643568/96‑1 (MQ=255)

                                               aaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTg                                               >  2:4610105/1‑96 (MQ=255)

                                               aaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTg                                               <  2:11014569/96‑1 (MQ=255)

                                                aaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGc                                              <  1:13591539/96‑1 (MQ=255)

                                                aaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGc                                              <  1:14186885/96‑1 (MQ=255)

                                                 aGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCg                                             >  1:10296086/1‑96 (MQ=255)

                                                  gCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCgg                                            >  2:2840990/1‑96 (MQ=255)

                                                  gCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCgg                                            <  1:7889504/96‑1 (MQ=255)

                                                   cTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGa                                           <  2:10083352/96‑1 (MQ=255)

                                                     aCAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAgg                                         >  2:543733/1‑96 (MQ=255)

                                                      cAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt                                        <  1:6075538/96‑1 (MQ=255)

                                                         cGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATCGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttt                                     <  2:10393774/96‑1 (MQ=255)

                                                          gTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGttttt                                    >  2:11560703/1‑96 (MQ=255)

                                                           tATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt                                   >  2:7363893/1‑96 (MQ=255)

                                                           tATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt                                   <  2:7613589/96‑1 (MQ=255)

                                                             tagAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGa                                 >  1:14329946/3‑96 (MQ=255)

                                                                aaaTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTGTGAATg                              <  2:13705575/96‑1 (MQ=255)

                                                                aaaTGGAAAATGAAATAGTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATg                              <  1:9506893/96‑1 (MQ=255)

                                                                 aaTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGATGCGGAGGTTTTTTGAATga                             >  1:8341412/1‑96 (MQ=255)

                                                                  aTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAAAAGTTATGAGAAAACATGGGGATGCGGAGGTTTTTTTAATgag                            >  2:14397359/1‑96 (MQ=17)

                                                                   tGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga                           <  1:10400391/96‑1 (MQ=255)

                                                                     gAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACg                         <  2:8393513/96‑1 (MQ=255)

                                                                     gAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACg                         >  2:8815516/1‑96 (MQ=255)

                                                                     gAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGCAGGTTTTTTGAATGAGACg                         <  2:12366412/96‑1 (MQ=255)

                                                                      acaaTGAAATTTTAAAAAAGGCTACTGTAGTTTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGa                        >  1:11680042/3‑96 (MQ=255)

                                                                       aaaTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa                       >  2:12181886/1‑96 (MQ=255)

                                                                        aaTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAc                      >  1:10816341/1‑96 (MQ=255)

                                                                         aTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACa                     >  2:9376691/1‑96 (MQ=255)

                                                                          tGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAt                    >  2:4368038/1‑96 (MQ=255)

                                                                          tGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAt                    >  2:9657396/1‑96 (MQ=255)

                                                                           gAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAtt                   <  2:11216863/96‑1 (MQ=40)

                                                                           gAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAtt                   >  2:7934476/1‑96 (MQ=40)

                                                                           gAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAtt                   >  1:13251012/1‑96 (MQ=40)

                                                                             aaTATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTa                 <  2:3978108/96‑1 (MQ=38)

                                                                             aaTATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTa                 >  1:3483425/1‑96 (MQ=38)

                                                                               tatTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTAca               <  1:6738727/96‑1 (MQ=37)

                                                                                 ttAAAAAAGGCTACTGTAGATTCAATTGGTCATCGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTAcagc             <  1:9369867/96‑1 (MQ=37)

                                                                                 ttAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTAcagc             <  1:7507904/96‑1 (MQ=37)

                                                                                   aaaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTAcagcag           <  1:9679079/96‑1 (MQ=37)

                                                                                    aaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCaga          >  1:13409678/1‑96 (MQ=37)

                                                                                    aaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCaga          >  2:14195265/1‑96 (MQ=37)

                                                                                    aaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCaga          <  2:2990006/96‑1 (MQ=37)

                                                                                    aaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCaga          >  1:7272248/1‑96 (MQ=37)

                                                                                     aaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCagag         >  2:4851779/1‑96 (MQ=37)

                                                                                      aaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAgg        <  1:412753/96‑1 (MQ=37)

                                                                                      aaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAgg        <  2:810621/96‑1 (MQ=37)

                                                                                      aaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAgg        <  1:8914405/96‑1 (MQ=37)

                                                                                      aaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAgg        <  1:6002254/96‑1 (MQ=37)

                                                                                       aaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGa       >  2:12020615/1‑96 (MQ=37)

                                                                                         ggCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaa     >  2:12889622/1‑96 (MQ=34)

                                                                                          gCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaa    >  1:2937697/1‑96 (MQ=33)

                                                                                          gCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaa    >  1:11885910/1‑96 (MQ=33)

                                                                                          gCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaa    >  1:5355828/1‑96 (MQ=33)

                                                                                           cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaaa   <  2:13924647/96‑1 (MQ=32)

                                                                                           cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaaa   <  1:513479/96‑1 (MQ=32)

                                                                                            tACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAg  >  1:4892989/1‑96 (MQ=31)

                                                                                            tACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAg  >  2:10606151/1‑96 (MQ=31)

GCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAG  >  NC_000913/269670‑269857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.