Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,976,527 Δ776 bp insB5insA5 insB5, insA5

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1976527–1977294 1977302 9–776 462 [0] [0] 465 insB5–insA5 insB5,insA5

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19765260 (0.000)423 (0.800) 154/174 0.4 100% intergenic (‑305/+16) b1892/insB5 FlhD/IS1 protein InsB
?NC_000913 1977303 = 0 (0.000)intergenic (‑64/‑474) insA5/yecG IS1 protein InsA/putative regulator

Only 100 of 462 total aligned reads displayed.

ACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913/1976431‑1976621
                                                                                               |                                                                                               
 cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGt                                                                                                <  2:10353350‑M1/96‑2 (MQ=255)
 cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGt                                                                                                <  2:5209429‑M1/96‑2 (MQ=255)
  tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGta                                                                                               <  2:10791475‑M1/96‑3 (MQ=255)
    gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtata                                                                                             >  2:6992802‑M1/1‑92 (MQ=255)
      cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                           >  2:10616520‑M1/1‑90 (MQ=255)
      cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                           <  2:1499507‑M1/96‑7 (MQ=255)
      cACTACACGCACATACAACGGAGGGGGGCTACGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                           >  1:688962‑M1/1‑90 (MQ=255)
       aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagt                                                                                          >  2:12338787‑M1/1‑89 (MQ=255)
       aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagt                                                                                          >  1:8439624‑M1/1‑89 (MQ=255)
        cTACACGCACATCCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtc                                                                                         <  2:5564211‑M1/96‑9 (MQ=255)
          acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcat                                                                                       <  1:3475521‑M1/96‑11 (MQ=255)
           cacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcata                                                                                      >  1:1402531‑M1/1‑85 (MQ=255)
            acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                     >  1:3180413‑M1/1‑84 (MQ=255)
             cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatagt                                                                                    <  1:10589363‑M1/96‑14 (MQ=255)
             cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatact                                                                                    <  2:9144631‑M1/96‑14 (MQ=255)
              gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactt                                                                                   >  2:1865355‑M1/1‑82 (MQ=255)
               cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                  <  2:2921528‑M1/96‑16 (MQ=255)
               cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                  >  1:3041457‑M1/1‑81 (MQ=255)
               cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                  >  1:4382455‑M1/1‑81 (MQ=255)
                 caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttg                                                                                <  2:1722665‑M1/96‑18 (MQ=255)
                 caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttg                                                                                <  1:1623106‑M1/96‑18 (MQ=255)
                  ctaCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgt                                                                               >  1:13865808‑M1/2‑78 (MQ=255)
                   tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              <  2:2339382‑M1/96‑20 (MQ=255)
                   tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              <  2:3362703‑M1/96‑20 (MQ=255)
                   tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              >  2:8301682‑M1/1‑77 (MQ=255)
                     cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtttt                                                                            >  2:4081228‑M1/1‑75 (MQ=255)
                        cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttggg                                                                         >  1:5372854‑M1/1‑72 (MQ=255)
                         ggAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                        >  1:1434051‑M1/1‑71 (MQ=255)
                           aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgt                                                                      >  1:8529414‑M1/1‑69 (MQ=255)
                             gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtat                                                                    <  1:3104180‑M1/96‑30 (MQ=255)
                              ggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatt                                                                   >  2:5407165‑M1/1‑66 (MQ=255)
                               gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattt                                                                  <  1:7276684‑M1/96‑32 (MQ=255)
                                ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                                 <  2:9583938‑M1/96‑33 (MQ=255)
                                   tGCGATTTTCAATAATGCGTGATGCAGTTCACACAAAACACTCAATTACTTAACATAAATGtataattcatacttttgttttgggtgtatttcaat                                                              >  1:4552250‑M1/1‑61 (MQ=255)
                                    gCGATTTTCAATAATGCGTGGTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatc                                                             >  1:8930106‑M1/1‑60 (MQ=255)
                                     cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatct                                                            >  2:3090480‑M1/1‑59 (MQ=255)
                                      gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                           <  2:7176754‑M1/96‑39 (MQ=255)
                                        ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                         <  2:7496320‑M1/96‑41 (MQ=255)
                                          ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaa                                                       <  1:10309257‑M1/96‑43 (MQ=255)
                                            cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaa                                                     <  2:627170‑M1/96‑45 (MQ=255)
                                              ataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaag                                                   >  1:12683690‑M1/1‑50 (MQ=255)
                                               taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtctaagtcatacttttgttttgggtgtatttcaatctgttaaaaagt                                                  <  2:3215349‑M1/96‑48 (MQ=255)
                                                aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt                                                 <  1:8229205‑M1/96‑49 (MQ=255)
                                                aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt                                                 <  2:574857‑M1/96‑49 (MQ=255)
                                                  tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttt                                               >  1:3827604‑M1/1‑46 (MQ=255)
                                                  tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttat                                               <  1:11787296‑M1/96‑51 (MQ=255)
                                                   gCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                              <  1:13179317‑M1/96‑52 (MQ=255)
                                                   gCGTGATGCAGAGCACACAAAACACTCAATTACTTAACATAAATGtatacgtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                              <  1:12102876‑M1/96‑52 (MQ=255)
                                                    cGTGATGCAGATCACACAAAACAGTCAATTACTTAACATAAATGtataagtcatactattgttttgggtgtatttcaatctgttaaaaagtttttc                                             <  2:10159574‑M1/96‑53 (MQ=255)
                                                     gTGATGCAGATCACACAAAACCCTCAATTCCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                            <  2:6061520‑M1/96‑54 (MQ=255)
                                                     gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                            >  2:2796464‑M1/1‑43 (MQ=255)
                                                       gATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgct                                          <  1:410196‑M1/96‑56 (MQ=255)
                                                        aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta                                         >  2:2486839‑M1/1‑40 (MQ=255)
                                                        aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta                                         >  1:4938742‑M1/1‑40 (MQ=255)
                                                         tGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                        <  1:13628257‑M1/96‑58 (MQ=255)
                                                         tGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                        <  1:11240984‑M1/96‑58 (MQ=255)
                                                           cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                      >  1:13411833‑M1/1‑37 (MQ=255)
                                                            aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgct                                     <  2:11303040‑M1/96‑61 (MQ=255)
                                                            aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgct                                     >  2:13641341‑M1/1‑36 (MQ=255)
                                                             gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                    <  1:9504431‑M1/96‑62 (MQ=255)
                                                             gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttattttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                    <  2:3731975‑M1/96‑62 (MQ=255)
                                                               tCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                                  <  2:4333284‑M1/96‑64 (MQ=255)
                                                                  cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                               <  1:12418857‑M1/96‑67 (MQ=255)
                                                                  cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                               >  2:7677731‑M1/1‑30 (MQ=255)
                                                                  cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                               >  1:5211646‑M1/1‑30 (MQ=255)
                                                                   acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagc                              <  2:4885161‑M1/96‑68 (MQ=255)
                                                                   acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagc                              >  2:11928969‑M1/1‑29 (MQ=255)
                                                                    caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagca                             <  2:8955123‑M1/96‑69 (MQ=255)
                                                                     aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                            <  1:5886439‑M1/96‑70 (MQ=255)
                                                                     aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                            <  2:13962606‑M1/96‑70 (MQ=255)
                                                                        acacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                         <  2:6809446‑M1/96‑73 (MQ=255)
                                                                         cacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        >  2:12164439‑M1/1‑23 (MQ=255)
                                                                          acTCAATTTCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg                       <  2:9424885‑M1/96‑75 (MQ=255)
                                                                          acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg                       >  2:6625499‑M1/1‑22 (MQ=255)
                                                                            tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa                     >  2:4608896‑M1/1‑20 (MQ=255)
                                                                              aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                   <  2:7975645‑M1/96‑79 (MQ=255)
                                                                              aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                   <  1:2792712‑M1/96‑79 (MQ=255)
                                                                               aTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca                  <  2:13350041‑M1/96‑80 (MQ=255)
                                                                               aTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca                  >  2:14252589‑M1/1‑17 (MQ=255)
                                                                                ttACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                 <  2:8591559‑M1/96‑81 (MQ=255)
                                                                                  aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagga               <  1:8639069‑M1/96‑83 (MQ=255)
                                                                                   cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaa              <  1:1976587‑M1/96‑84 (MQ=255)
                                                                                   cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaa              <  1:14226803‑M1/96‑84 (MQ=255)
                                                                                    ttAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaat             >  1:8750705‑M1/1‑12 (MQ=255)
                                                                                     tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata            >  1:3259358‑M1/1‑11 (MQ=255)
                                                                                     tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata            <  1:7703649‑M1/96‑86 (MQ=255)
                                                                                      agcatAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataa           >  1:11064974‑M1/3‑10 (MQ=255)
                                                                                       aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat          <  2:11694444‑M1/96‑88 (MQ=255)
                                                                                       aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat          <  1:2412807‑M1/96‑88 (MQ=255)
                                                                                        cATAAATGtataagtcatactttagttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc         <  1:10093109‑M1/96‑89 (MQ=255)
                                                                                         aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcg        >  1:9868856‑M1/1‑7 (MQ=255)
                                                                                          tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcga       >  2:13478719‑M1/1‑6 (MQ=255)
                                                                                          tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcga       >  2:13049978‑M1/1‑6 (MQ=255)
                                                                                          tAAATGtataagtcatacttttggtttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataataga       >  1:6313764‑M1/1‑6 (MQ=255)
                                                                                           aaaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaa      >  1:14105096‑M1/1‑5 (MQ=255)
                                                                                           aaaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaa      <  1:9179972‑M1/96‑92 (MQ=255)
                                                                                            aaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatctaaa     <  2:12568096‑M1/96‑93 (MQ=255)
                                                                                            aaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa     <  2:2187191‑M1/96‑93 (MQ=255)
                                                                                               gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg  >  1:7997311‑M1/1‑1 (MQ=255)
                                                                                               gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg  <  1:6523982‑M1/96‑96 (MQ=255)
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ACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913/1976431‑1976621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.