Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 3,156,257 (CCA)2→1 coding (594‑596/930 nt) yqhG → hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 31562562 (0.000)458 (0.820) 167/184 0.2 99.6% coding (593/930 nt) yqhG hypothetical protein
?NC_000913 3156260 = 2 (0.000)coding (597/930 nt) yqhG hypothetical protein

Only 100 of 486 total aligned reads displayed.

AAAAGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATC  >  NC_000913/3156161‑3156351
                                                                                               |                                                                                               
aaaaGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA                                                                                                 <  1:3065266‑M1/96‑1 (MQ=255)
 aaaGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAg                                                                                                >  2:1848414‑M1/1‑95 (MQ=255)
   aGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggc                                                                                              <  1:323326‑M1/96‑4 (MQ=255)
    gAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcg                                                                                             <  1:2351481‑M1/96‑5 (MQ=255)
    gAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcg                                                                                             >  1:7145767‑M1/1‑92 (MQ=255)
    gAACACCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATCTTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcg                                                                                             <  1:4186472‑M1/96‑5 (MQ=255)
     aaCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcgg                                                                                            <  2:2559213‑M1/96‑6 (MQ=255)
     aaCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcgg                                                                                            <  2:3123746‑M1/96‑6 (MQ=255)
      aCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggt                                                                                           >  2:11191261‑M1/1‑90 (MQ=255)
      aCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggt                                                                                           <  1:2213459‑M1/96‑7 (MQ=255)
        aGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggtta                                                                                         <  1:2546061‑M1/96‑9 (MQ=255)
        aGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTCGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggtca                                                                                         <  1:10561456‑M1/96‑9 (MQ=255)
           cGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatg                                                                                      <  1:6525307‑M1/96‑12 (MQ=255)
             gAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc                                                                                    <  2:6279196‑M1/96‑14 (MQ=255)
             gAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc                                                                                    >  1:1681215‑M1/1‑83 (MQ=255)
                 ccTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttct                                                                                >  2:6934646‑M1/1‑79 (MQ=255)
                 ccTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttct                                                                                <  1:5482218‑M1/96‑18 (MQ=255)
                  cTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttcta                                                                               <  1:6701899‑M1/96‑19 (MQ=255)
                   tttGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctat                                                                              <  1:4374918‑M1/96‑20 (MQ=255)
                   tttGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctat                                                                              <  2:3387974‑M1/96‑20 (MQ=255)
                   tttGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctat                                                                              <  1:5653384‑M1/96‑20 (MQ=255)
                     tgttgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataa                                                                            <  2:7371099‑M1/96‑22 (MQ=255)
                     tgttgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataa                                                                            >  2:10179415‑M1/1‑75 (MQ=255)
                      gttgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTCCCGCCAggcggttaatgccttctataaa                                                                           <  2:13889838‑M1/96‑23 (MQ=255)
                       ttgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCTGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaa                                                                          >  2:6439461‑M1/1‑73 (MQ=255)
                        tgCCGAACTCTTTGAACATATTGCTTATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaac                                                                         <  2:4377441‑M1/96‑25 (MQ=255)
                        tgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaac                                                                         <  1:10178943‑M1/96‑25 (MQ=255)
                        tgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaac                                                                         >  1:13964557‑M1/1‑72 (MQ=255)
                        tgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaac                                                                         >  1:13395837‑M1/1‑72 (MQ=255)
                         gCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaacc                                                                        <  2:8006846‑M1/96‑26 (MQ=255)
                           cGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccac                                                                      <  1:6053633‑M1/96‑28 (MQ=255)
                            gAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccacc                                                                     >  1:11188611‑M1/1‑68 (MQ=255)
                               ctctTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttc                                                                  <  1:13782294‑M1/96‑32 (MQ=255)
                                 ctTTGAACATATTGCTGATTATAGCTGGCCGTGGATGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaa                                                                >  1:12454552‑M1/1‑63 (MQ=255)
                                  tttGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaag                                                               <  2:8215594‑M1/96‑35 (MQ=255)
                                  tttGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaag                                                               <  1:49814‑M1/96‑35 (MQ=255)
                                   ttGAACATATTGCTGATTATCGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccgccttcaaga                                                              <  2:5809201‑M1/96‑36 (MQ=255)
                                    tGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAgggggttaatgccttctataaaaccaccttcaagac                                                             <  2:11594848‑M1/96‑37 (MQ=255)
                                    tGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagac                                                             <  2:7610398‑M1/96‑37 (MQ=255)
                                     ggacaTATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacg                                                            >  1:11123454‑M1/3‑59 (MQ=255)
                                     gAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacg                                                            <  2:3718828‑M1/96‑38 (MQ=255)
                                      aaCATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacgg                                                           <  1:9988424‑M1/96‑39 (MQ=255)
                                        cATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggcc                                                         <  1:5272183‑M1/96‑41 (MQ=255)
                                        cATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggcc                                                         >  2:12955131‑M1/1‑56 (MQ=255)
                                        cATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggcc                                                         >  2:2941800‑M1/1‑56 (MQ=255)
                                        cATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggcc                                                         >  2:7306347‑M1/1‑56 (MQ=255)
                                          tatTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaa                                                       <  1:12138166‑M1/96‑43 (MQ=255)
                                             tGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataa                                                    <  1:7213921‑M1/96‑46 (MQ=255)
                                               cTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatc                                                  <  2:8347772‑M1/96‑48 (MQ=255)
                                                tGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc                                                 >  2:10836442‑M1/1‑48 (MQ=255)
                                                tGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc                                                 >  1:13114107‑M1/1‑48 (MQ=255)
                                                 gATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatccc                                                >  1:8416699‑M1/1‑47 (MQ=255)
                                                  aTTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccg                                               <  2:13466757‑M1/96‑51 (MQ=255)
                                                  aTTATAGCTGGCCGTGGACGTGGGGGGTTTCCGACTCTTACCGCCAggcgggtaatgccttctataaaaccaccttcaagacggccaataatcccg                                               >  2:4638936‑M1/1‑46 (MQ=255)
                                                   ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccga                                              >  1:10919690‑M1/1‑45 (MQ=255)
                                                   ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccga                                              >  2:12339314‑M1/1‑45 (MQ=255)
                                                   taatagcTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccga                                              >  1:7527097‑M1/3‑45 (MQ=255)
                                                     ttagGTGGCCGGTGAAGGGGGTGGTTTCCGACTCTTACCGCCAggcggttaatggcttttataaaacccccttcaagacggccaataatcccgatg                                            <  2:5257016‑M1/95‑54 (MQ=255)
                                                     ataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatg                                            <  2:7145767‑M1/96‑54 (MQ=255)
                                                     ataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatg                                            <  2:9758346‑M1/96‑54 (MQ=255)
                                                     ataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatg                                            >  1:6332175‑M1/1‑43 (MQ=255)
                                                     ataGCGGGCCATGGACGTGGGTGGTTTCCGACTCTGACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAATCCACCTTCAAGACGGGCAATAATCCCGATg                                         <  1:7056303/96‑1 (MQ=255)
                                                      taGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatga                                           >  2:9272057‑M1/1‑42 (MQ=255)
                                                      taGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatga                                           <  2:12659321‑M1/96‑55 (MQ=255)
                                                        gCTGGCCGTGGACGGGGGAGGTTTCCGACTCTTACCGCCAggcggttactgccttctataaaaccaccttcaagacggccaataatcccgatgaag                                         >  1:9096202‑M1/1‑40 (MQ=255)
                                                         cTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaaga                                        >  2:14322108‑M1/1‑39 (MQ=255)
                                                          tGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagat                                       <  1:1227601‑M1/96‑59 (MQ=255)
                                                          tGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagat                                       >  2:2770950‑M1/1‑38 (MQ=255)
                                                          tGGCCGTGGACGGGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagag                                       >  1:9739786‑M1/1‑38 (MQ=255)
                                                             ccGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatg                                    <  1:1500573‑M1/96‑62 (MQ=255)
                                                              cGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgaggaagatatgc                                   >  2:13232047‑M1/1‑34 (MQ=255)
                                                               gTGGACGTGGGGGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgca                                  >  1:11538223‑M1/1‑33 (MQ=255)
                                                               gTGGACGTGGGGGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgca                                  >  2:4241470‑M1/1‑33 (MQ=255)
                                                                tGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaacccaccttcaagacggccaataatcccgatgaagatatgcaa                                 <  2:12472978‑M1/96‑65 (MQ=255)
                                                                tGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaa                                 <  1:4502409‑M1/96‑65 (MQ=255)
                                                                tGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaa                                 <  2:11983896‑M1/96‑65 (MQ=255)
                                                                    cGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatag                             <  1:1866770‑M1/96‑69 (MQ=255)
                                                                     gtgggtggTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaataga                            >  1:5413036‑M1/1‑27 (MQ=255)
                                                                       gggtggTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaac                          <  2:13988947‑M1/96‑72 (MQ=255)
                                                                          tggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggc                       >  1:13574501‑M1/1‑22 (MQ=255)
                                                                           ggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaacccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggca                      <  2:6525653‑M1/96‑76 (MQ=255)
                                                                           ggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggca                      >  2:9555692‑M1/1‑21 (MQ=255)
                                                                              ttCCGACTCTTACCGCCAggcggttaatgccttctataaaccccccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatt                   <  2:2382040‑M1/96‑79 (MQ=255)
                                                                              ttCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatt                   <  1:10038666‑M1/96‑79 (MQ=255)
                                                                              ttCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatt                   >  2:4032226‑M1/1‑18 (MQ=255)
                                                                               tCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaattt                  <  1:3766392‑M1/96‑80 (MQ=255)
                                                                                ccGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaattta                 >  1:3968653‑M1/1‑16 (MQ=255)
                                                                                ccGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaattta                 <  1:1744504‑M1/96‑81 (MQ=255)
                                                                                  gACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatt               >  2:4679996‑M1/1‑14 (MQ=255)
                                                                                  gACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatt               >  1:8901381‑M1/1‑14 (MQ=255)
                                                                                   aCTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttattt              >  2:8924138‑M1/1‑13 (MQ=255)
                                                                                    ctctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttattta             <  1:7927452‑M1/96‑85 (MQ=255)
                                                                                      ctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacg           <  2:5952978‑M1/96‑87 (MQ=255)
                                                                                       ttACCGCCAggcggttaatgctttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacca          >  1:12860907‑M1/1‑9 (MQ=255)
                                                                                        tACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgac         <  2:1663186‑M1/96‑89 (MQ=255)
                                                                                        tACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgac         <  1:7308458‑M1/96‑89 (MQ=255)
                                                                                          ccGCCAggcgcttaatgccttatataaaaccaccttcaagacggccaataaccccgatgaagataggcaaatagaacggcaatttatttacgacaa       <  1:14174615‑M1/96‑91 (MQ=255)
                                                                                           cGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaat      <  2:13114107‑M1/96‑92 (MQ=255)
                                                                                             ccAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaatcc    <  1:3522406‑M1/96‑94 (MQ=255)
                                                                                               aggcggttaattccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaatccta  <  1:14273468‑M1/96‑96 (MQ=255)
                                                                                               |                                                                                               
AAAAGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATC  >  NC_000913/3156161‑3156351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.