New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3349258 =54 (0.090)572 (0.990) 180/190 0.0 91.4% coding (1403/2331 nt) arcB aerobic respiration sensor‑response protein
?NC_000913 = 3349263 NA (NA)coding (1398/2331 nt) arcB aerobic respiration sensor‑response protein

Only 100 of 585 total aligned reads displayed.

GTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATA‑‑‑‑‑‑CCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCAC  >  NC_000913/3349168‑3349358
                                                                                                     |                                                                                               
gTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATA‑‑‑‑‑‑CCGGTg                                                                                                 <  2:1008889/96‑1 (MQ=255)
      gttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg                                                                                                 >  2:13946263‑M1/91‑96 (MQ=255)
       ttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                                <  1:3901633‑M1/7‑1 (MQ=255)
         gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa                                                                                              <  1:685416‑M1/9‑1 (MQ=255)
         gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa                                                                                              <  1:11595179‑M1/9‑1 (MQ=255)
         gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa                                                                                              <  1:14124599‑M1/9‑1 (MQ=255)
          aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAg                                                                                             >  1:9260411‑M1/87‑96 (MQ=255)
          aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAg                                                                                             <  2:1709795‑M1/10‑1 (MQ=255)
              tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                         <  2:1459409‑M1/14‑1 (MQ=255)
               ttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagacgcggccagaccaataccggtgCCGGTGGCAGGTTTa                                                                                        >  1:8610543‑M1/82‑96 (MQ=255)
               ttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTa                                                                                        >  1:10374827‑M1/82‑96 (MQ=255)
               cgtccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTa                                                                                        >  1:9649306‑M1/82‑96 (MQ=255)
                tgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                       >  2:4607293‑M1/81‑96 (MQ=255)
                    ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                                   <  1:7820261‑M1/20‑1 (MQ=255)
                    ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                                   >  1:5188008‑M1/77‑96 (MQ=255)
                    ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                                   >  2:8320580‑M1/77‑96 (MQ=255)
                    ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                                   <  2:8927685‑M1/20‑1 (MQ=255)
                      gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                                 >  1:10891655‑M1/75‑96 (MQ=255)
                      gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                                 >  2:14124599‑M1/75‑96 (MQ=255)
                      gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                                 <  2:2332462‑M1/22‑1 (MQ=255)
                      gttcgctggtaaccgtaatatcgccgccaatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                                 <  2:11406273‑M1/22‑1 (MQ=255)
                       ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg                                                                                >  1:2129500‑M1/74‑96 (MQ=255)
                       ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg                                                                                >  1:3360078‑M1/74‑96 (MQ=255)
                       ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg                                                                                >  2:6866422‑M1/74‑96 (MQ=255)
                        tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccactcccggtgCCGGTGGCAGGTTTACCGCCATGa                                                                               >  2:8181482‑M1/73‑96 (MQ=255)
                          gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                             >  2:11577121‑M1/71‑96 (MQ=255)
                            tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGt                                                                           >  2:13396428‑M1/69‑96 (MQ=255)
                             tggtaacctaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGGGGCAGGTTTACCCCCATGACTGTc                                                                          <  1:2641763‑M1/29‑1 (MQ=255)
                             ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGAAGGTTTACCGCCATGACTGTc                                                                          <  1:1259720‑M1/29‑1 (MQ=255)
                             ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggagCCGGGGGCAGGTTTACCGGCATGACTGTc                                                                          <  2:4059585‑M1/29‑1 (MQ=255)
                              gtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacgtccagaccaataccggtgCCGGTGGCAGGTGTACCGCCATGactggct                                                                         <  1:1660697‑M1/30‑4 (MQ=255)
                              gtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                         >  1:4485092‑M1/67‑96 (MQ=255)
                                aaccgtaatatcgccgcccatatttttcgccagacgacgtgaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCttt                                                                       <  2:2815271‑M1/32‑1 (MQ=255)
                                aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCttt                                                                       <  2:12301720‑M1/32‑1 (MQ=255)
                                  ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa                                                                     >  2:3463974‑M1/63‑96 (MQ=255)
                                  ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa                                                                     <  1:2363763‑M1/34‑1 (MQ=255)
                                   cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                                    <  2:10733792‑M1/35‑1 (MQ=255)
                                   cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                                    <  2:9344298‑M1/35‑1 (MQ=255)
                                   cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                                    >  2:10505352‑M1/62‑96 (MQ=255)
                                    gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                   <  2:3915278‑M1/36‑1 (MQ=255)
                                     taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaatgccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                                  >  2:5167958‑M1/60‑96 (MQ=255)
                                     taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                                  >  2:2019030‑M1/60‑96 (MQ=255)
                                     taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                                  >  1:4069674‑M1/60‑96 (MQ=255)
                                      aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTg                                                                 >  1:7241992‑M1/59‑96 (MQ=255)
                                       atatcgccgcccatatttttcgccagacgacgagaaccggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTgg                                                                >  2:9556125‑M1/58‑96 (MQ=255)
                                        tatCGCCGCCCATATTTTTCGCCAGACGACGAGAACCGGCCAGCCCAATACCGGCGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCAGGt                                                               <  2:8655288/96‑1 (MQ=255)
                                         atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa                                                              >  2:10939213‑M1/56‑96 (MQ=255)
                                           cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt                                                            >  1:287243‑M1/54‑96 (MQ=255)
                                             ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAc                                                          <  1:1478099‑M1/45‑1 (MQ=255)
                                               gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                        >  1:583057‑M1/50‑96 (MQ=255)
                                               gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                        >  1:6380860‑M1/50‑96 (MQ=255)
                                               gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                        <  1:3249596‑M1/47‑1 (MQ=255)
                                               gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                        <  2:7917524‑M1/47‑1 (MQ=255)
                                                  catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc                                                     >  1:10188956‑M1/47‑96 (MQ=255)
                                                   atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGTCTGTCTTTCACCTGGTAATACATGGCg                                                    <  1:3662737‑M1/51‑1 (MQ=255)
                                                     atttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaa                                                  <  1:12775742‑M1/53‑1 (MQ=255)
                                                        tttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                               >  2:3324586‑M1/41‑96 (MQ=255)
                                                        tttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                               <  1:11888411‑M1/56‑1 (MQ=255)
                                                        tttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGGTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                               <  1:4256223‑M1/56‑1 (MQ=255)
                                                         tgcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                              >  1:8204281‑M1/40‑96 (MQ=255)
                                                           cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtttt                                            <  2:592198‑M1/59‑1 (MQ=255)
                                                            gtcagacgacgagaaacggccagaccaataccggtgCCGGTAGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGACAATTTTa                                           <  1:10703112‑M1/60‑1 (MQ=255)
                                                             ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt                                          <  2:4755496‑M1/61‑1 (MQ=255)
                                                              cagacgacgagaaacgcccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                         >  2:1852446‑M1/35‑96 (MQ=255)
                                                               agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTTGTAATACATGGCGAAAATTTTATcc                                        <  2:7649021‑M1/63‑1 (MQ=255)
                                                                gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                       >  1:12324135‑M1/33‑96 (MQ=255)
                                                                 acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg                                      <  1:6210032‑M1/65‑1 (MQ=255)
                                                                    acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                                   >  2:11121372‑M1/29‑96 (MQ=255)
                                                                     cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCa                                  >  1:11258624‑M1/28‑96 (MQ=255)
                                                                      gagaaccggccagaccaataccagtgCCGGTGGCAGGTTTACCGCCATGCCTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAt                                 >  2:117729‑M1/27‑96 (MQ=255)
                                                                      gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAt                                 >  2:65114‑M1/27‑96 (MQ=255)
                                                                       agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                                <  1:9088751‑M1/71‑1 (MQ=255)
                                                                        gaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTcatgc                               >  1:9354628‑M1/25‑94 (MQ=255)
                                                                        gaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                               <  1:7077337‑M1/72‑1 (MQ=255)
                                                                         aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                              <  2:6332038‑M1/73‑1 (MQ=255)
                                                                          aacggccagaccaattccggtgCCGGTGGCAGGTTTACCGCCATGGCTGTCTTTCCCCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                             >  1:3007326‑M1/23‑96 (MQ=255)
                                                                           acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                            >  1:12993855‑M1/22‑96 (MQ=255)
                                                                             ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCgg                          <  2:4298249‑M1/77‑1 (MQ=255)
                                                                              gccngaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                         <  2:4976808‑M1/78‑1 (MQ=255)
                                                                              gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                         <  2:6641523‑M1/78‑1 (MQ=255)
                                                                               ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                        <  2:7364298‑M1/79‑1 (MQ=255)
                                                                                cagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                       >  1:765414‑M1/17‑96 (MQ=255)
                                                                                cagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                       >  1:6536841‑M1/17‑96 (MQ=255)
                                                                                cagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                       <  1:13786647‑M1/80‑1 (MQ=255)
                                                                                cagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                       <  2:2553433‑M1/80‑1 (MQ=255)
                                                                                  gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGc                     >  1:5391497‑M1/15‑96 (MQ=255)
                                                                                  gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGc                     >  2:7131729‑M1/15‑96 (MQ=255)
                                                                                     caataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa                  >  2:12651238‑M1/12‑96 (MQ=255)
                                                                                        taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc               <  2:3692407‑M1/88‑1 (MQ=255)
                                                                                         accggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAcc              >  2:13614467‑M1/8‑96 (MQ=255)
                                                                                          ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa             <  2:9104349‑M1/90‑1 (MQ=255)
                                                                                           cggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCag            >  2:21743‑M1/6‑96 (MQ=255)
                                                                                            ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa                >  2:569849‑M1/5‑91 (MQ=255)
                                                                                            ggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga           >  1:13369149‑M1/5‑96 (MQ=255)
                                                                                             gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag          >  2:5409895‑M1/4‑96 (MQ=255)
                                                                                             gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag          >  1:472686‑M1/4‑96 (MQ=255)
                                                                                              tgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGt         <  2:12951139‑M1/94‑1 (MQ=255)
                                                                                                ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCt       <  1:5312460/96‑1 (MQ=255)
                                                                                                  ggTGGCAGGTTTACCGCCATGACTGGCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTc     >  1:987650/1‑96 (MQ=255)
                                                                                                   gTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTcc    <  1:11406273/96‑1 (MQ=255)
                                                                                                     |                                                                                               
GTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATA‑‑‑‑‑‑CCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCAC  >  NC_000913/3349168‑3349358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.