BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,607,710	A→G	L332P (CTT→CCT)	uxaB ←	altronate oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,607,710	0	A	G	100.0%	2122.7 / NA	536	L332P (CTT→CCT)	uxaB	altronate oxidoreductase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (258/278); total (258/278)

Only 100 of 547 total aligned reads displayed.

CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC  >  NC_000913/1607617‑1607802

ccGTTGAGCGCGATCGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCAATGGCGAAAGATTCCAGTTCATCACGAGGc                                                                                            <  1:11366861/96‑1 (MQ=255)

ccGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGc                                                                                            <  2:13750399/96‑1 (MQ=255)

ccGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGc                                                                                            <  2:11850913/96‑1 (MQ=255)

  gTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa                                                                                          >  2:962488/1‑96 (MQ=255)

  gTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa                                                                                          <  2:18646/96‑1 (MQ=255)

   ttGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaaa                                                                                         >  2:10772745/1‑96 (MQ=255)

    tGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAt                                                                                        <  1:5277641/96‑1 (MQ=255)

      aGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcc                                                                                      <  1:1380637/96‑1 (MQ=255)

        cgcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCCCTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAg                                                                                    <  1:4162284/96‑1 (MQ=255)

        cgcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcctg                                                                                    <  1:10538295/96‑3 (MQ=255)

         gcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGt                                                                                   >  1:6512412/1‑96 (MQ=255)

          tgaaaGAAAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGATTGCACTGGCGAAATATTCCAGTTAATCACGAGGCAAATCCAGTa                                                                                  <  1:6294652/92‑1 (MQ=255)

          cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTa                                                                                  >  1:9288116/1‑96 (MQ=255)

          cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTa                                                                                  >  2:13961451/1‑96 (MQ=255)

          cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTa                                                                                  <  1:14042743/96‑1 (MQ=255)

           gATAGACAGAAGGTGATGCTTAATGTACGGATTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAc                                                                                 <  2:11660391/96‑1 (MQ=255)

            aTAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAcc                                                                                >  2:11227072/1‑96 (MQ=255)

            aTAGACAGCAGCTGATGCTTAATGTACGGGGTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAcc                                                                                >  1:6941593/1‑96 (MQ=255)

             tAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCg                                                                               >  2:10463827/1‑96 (MQ=255)

               gACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGa                                                                             >  2:4262959/1‑96 (MQ=255)

                aCAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaa                                                                            >  1:5004739/1‑96 (MQ=255)

                 cagcagCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaat                                                                           <  2:5199260/96‑1 (MQ=255)

                 cagcagCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaat                                                                           >  1:5834234/1‑96 (MQ=255)

                   gcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataa                                                                         <  2:3022307/96‑1 (MQ=255)

                    cagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataat                                                                        <  1:314682/96‑1 (MQ=255)

                        tGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttct                                                                    >  2:5851125/1‑96 (MQ=255)

                        tGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttct                                                                    >  1:7113086/1‑96 (MQ=255)

                         gATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttctt                                                                   >  1:12271926/1‑96 (MQ=255)

                            gCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGt                                                                <  2:6417335/96‑1 (MQ=255)

                             cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCgga                                                               <  1:10825995/96‑3 (MQ=255)

                             cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTa                                                               <  1:10173699/96‑1 (MQ=255)

                              ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCGGTACCGGAATAATTTCTTCGTAg                                                              >  2:12607575/1‑96 (MQ=255)

                              ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAg                                                              >  2:10972343/1‑96 (MQ=255)

                              ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAg                                                              >  2:9781655/1‑96 (MQ=255)

                               tAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCATTACCGGAATAATTTCTTCGTAGa                                                             >  2:6670447/1‑96 (MQ=255)

                               tAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGa                                                             >  2:10263670/1‑96 (MQ=255)

                                aaTGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGAt                                                            <  2:5510805/96‑1 (MQ=255)

                                 aTGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATa                                                           >  1:12170171/1‑96 (MQ=255)

                                 aTGTACGGGTTACGGAAACGCCCGGGGACTGCACTGGCGTAAGATTCCAGTTCATCACGAGGCAAATCCTGTACCGGAGTAATTTGTTGGTAGATa                                                           >  1:5516067/1‑96 (MQ=255)

                                  tGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAg                                                          <  2:4965075/96‑1 (MQ=255)

                                   gTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGc                                                         >  1:1748489/1‑96 (MQ=255)

                                     aCGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtt                                                       >  1:3891008/1‑96 (MQ=255)

                                      cGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCttt                                                      <  2:10075281/96‑1 (MQ=255)

                                      cGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCttt                                                      <  2:8504108/96‑1 (MQ=255)

                                       gggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt                                                     <  1:7454125/96‑1 (MQ=255)

                                       gggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt                                                     >  1:11166934/1‑96 (MQ=255)

                                            aCGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc                                                >  1:9937906/1‑96 (MQ=255)

                                            aCGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc                                                <  1:7860944/96‑1 (MQ=255)

                                             cGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACg                                               >  1:8070071/1‑96 (MQ=255)

                                             cGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACg                                               >  2:1629230/1‑96 (MQ=255)

                                                aaaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAt                                            <  2:8325810/96‑1 (MQ=255)

                                                aaaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGAAGATAGCTTTTTCAACGAAt                                            <  2:13162136/96‑1 (MQ=255)

                                                 aaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATg                                           <  2:8741936/96‑1 (MQ=255)

                                                 aaCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATg                                           <  1:277547/96‑1 (MQ=255)

                                                  aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgc                                          <  2:7478954/96‑1 (MQ=255)

                                                    gaccGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgcgc                                        >  1:11760107/3‑96 (MQ=255)

                                                    gCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgcgc                                        >  2:3344570/1‑96 (MQ=255)

                                                    gCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATgcgc                                        <  1:4585443/96‑1 (MQ=255)

                                                     cccGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCa                                       <  1:6144417/96‑1 (MQ=255)

                                                     cccGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCa                                       <  1:2514751/96‑1 (MQ=255)

                                                     cccGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCa                                       <  2:12396114/96‑1 (MQ=255)

                                                      ccGNTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACAGGAATAATTTCTTCGTAGATAGATTTTTCAACGAATGCGaaa                                      >  2:7818992/1‑96 (MQ=255)

                                                         gTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAtt                                   <  2:6061664/96‑1 (MQ=255)

                                                          tGACTGCACTGGCGAAAGATTGCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAttt                                  >  1:10389324/1‑96 (MQ=255)

                                                          tGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAttt                                  >  2:2198788/1‑96 (MQ=255)

                                                            aCTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCa                                >  1:440412/1‑96 (MQ=255)

                                                            aCTGCACTGGCGAAAGATTCCAGCTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCa                                <  1:12580892/96‑1 (MQ=255)

                                                                 aCTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATc                           >  1:7708914/1‑96 (MQ=255)

                                                                   ttgCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGATTAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGt                         >  1:13030357/3‑96 (MQ=255)

                                                                   tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGt                         >  1:13635184/1‑96 (MQ=255)

                                                                    ggCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGtt                        <  1:8209065/96‑1 (MQ=255)

                                                                    ggCGAAAGATTACAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCCTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGtt                        <  1:8640611/96‑1 (MQ=255)

                                                                      cGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa                      >  2:6186389/1‑96 (MQ=255)

                                                                      cGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa                      <  2:8107774/96‑1 (MQ=255)

                                                                      cGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa                      <  2:4172915/96‑1 (MQ=255)

                                                                         aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCg                   <  1:9549588/96‑1 (MQ=255)

                                                                            aTTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCtt                >  2:14391614/1‑96 (MQ=255)

                                                                             ttCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTc               <  1:2198788/96‑1 (MQ=255)

                                                                               ccAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCGTCGTTCATCGCTTCAc             >  1:12804688/1‑96 (MQ=255)

                                                                                cAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCAcc            >  2:2788285/1‑96 (MQ=255)

                                                                                 aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCt           <  1:14159113/96‑1 (MQ=255)

                                                                                 aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCt           >  1:13301015/1‑96 (MQ=255)

                                                                                 aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCt           >  2:12988753/1‑96 (MQ=255)

                                                                                   ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTAc         <  1:1589345/96‑1 (MQ=255)

                                                                                   ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTAc         >  1:336697/1‑96 (MQ=255)

                                                                                    tcatcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACg        <  1:206491/96‑1 (MQ=255)

                                                                                     catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg       <  2:2693699/96‑1 (MQ=255)

                                                                                     catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg       <  2:12170171/96‑1 (MQ=255)

                                                                                     catcaCGAGGCAAATCCAGTACCGGAATAATTTCGTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg       >  2:6980576/1‑96 (MQ=255)

                                                                                      atcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGt      >  1:1005168/1‑96 (MQ=255)

                                                                                      atcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGt      <  2:9073684/96‑1 (MQ=255)

                                                                                      atcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGt      <  2:14169417/96‑1 (MQ=255)

                                                                                        caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAt    >  2:4604825/1‑96 (MQ=255)

                                                                                        caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAt    <  2:2449707/96‑1 (MQ=255)

                                                                                        caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAt    <  1:9751907/96‑1 (MQ=255)

                                                                                        caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAt    <  1:8796952/96‑1 (MQ=255)

                                                                                          cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATcc  <  2:3938164/96‑1 (MQ=255)

                                                                                          cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATcc  <  1:8874953/96‑1 (MQ=255)

                                                                                          cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATcc  <  1:7256258/96‑1 (MQ=255)

                                                                                          cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGAATcc  >  2:3633318/1‑96 (MQ=255)

CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC  >  NC_000913/1607617‑1607802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`