Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,961,588 C→G R86T (AGG→ACG)  gppA ← guanosine pentaphosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,961,5880CG99.9% 2481.3 / NA 649R86T (AGG→ACG) gppAguanosine pentaphosphatase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (301/347);  minor base A (0/1);  total (301/348)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 678 total aligned reads displayed.

GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT  >  NC_000913/3961495‑3961680
                                                                                             |                                                                                            
   tCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGcc                                                                                         >  1:6813562/1‑96 (MQ=255)
   tCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGcc                                                                                         >  1:7414414/1‑96 (MQ=255)
    ccTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCg                                                                                        >  1:79963/1‑96 (MQ=255)
    ccTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCg                                                                                        >  2:7704568/1‑96 (MQ=255)
    ccTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCg                                                                                        <  2:4487531/96‑1 (MQ=255)
     ctctTCCCCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGccct                                                                                       <  1:10611438/96‑3 (MQ=255)
     ctctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGt                                                                                       >  1:2303340/1‑96 (MQ=255)
     ctctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGt                                                                                       >  1:1546059/1‑96 (MQ=255)
     ctctTCACCGCTGATCACCTGTAACGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGt                                                                                       <  1:10268442/96‑1 (MQ=255)
      tctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTa                                                                                      <  2:10830189/96‑1 (MQ=255)
       ctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAg                                                                                     <  2:1937937/96‑1 (MQ=255)
       ctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAg                                                                                     <  2:7955937/96‑1 (MQ=255)
            ccGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACa                                                                                <  2:516452/96‑1 (MQ=255)
             cGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACaa                                                                               <  1:11607442/96‑1 (MQ=255)
              gCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAc                                                                              >  2:11295216/1‑96 (MQ=255)
                 gATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGCAGCGACAAcgcg                                                                           >  1:497803/1‑96 (MQ=255)
                  aTCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGGGa                                                                          >  2:11549136/1‑96 (MQ=255)
                  aTCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGa                                                                          >  2:8069617/1‑96 (MQ=255)
                    cACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAAt                                                                        >  1:11027854/1‑96 (MQ=255)
                      ccTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAAttt                                                                      >  1:3070534/1‑96 (MQ=255)
                        tGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGc                                                                    <  2:2065025/96‑1 (MQ=255)
                        cgTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGc                                                                    <  2:4141271/95‑1 (MQ=255)
                         gTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCg                                                                   <  2:7451303/96‑1 (MQ=255)
                          tACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCga                                                                  <  2:3116330/96‑1 (MQ=255)
                           aCCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCgag                                                                 >  1:2146015/1‑96 (MQ=255)
                            ccGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAAGTTGCgagg                                                                >  1:13210877/1‑96 (MQ=255)
                              ggACAAGCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCgaggga                                                              >  2:13719318/1‑96 (MQ=255)
                              ggACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCgaggga                                                              >  1:2853252/1‑96 (MQ=255)
                              ggACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCgaggga                                                              >  2:10947344/1‑96 (MQ=255)
                               gACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCgagggag                                                             >  2:5753051/1‑96 (MQ=255)
                                 cAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGCCGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGggagga                                                           >  2:12855991/1‑96 (MQ=255)
                                 cAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACACCGCGAATTTGCGAGggagga                                                           <  1:455358/96‑1 (MQ=255)
                                 cAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGggagga                                                           >  1:3355066/1‑96 (MQ=255)
                                 cAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGggagga                                                           >  2:7575647/1‑96 (MQ=255)
                                  aaCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGaa                                                          >  1:5226001/1‑96 (MQ=255)
                                  aaCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATCTGCGAGGGAGGaa                                                          >  1:8374076/1‑96 (MQ=255)
                                    ccGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAata                                                        <  2:9665590/96‑1 (MQ=255)
                                     cGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAatat                                                       >  1:5386318/1‑96 (MQ=255)
                                      gagaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATc                                                      >  2:2442733/1‑96 (MQ=255)
                                       agaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCt                                                     <  1:11851702/96‑1 (MQ=255)
                                        gaATTTCCTGCGCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCtt                                                    <  1:6579108/96‑1 (MQ=255)
                                           tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCa                                                 <  2:3427149/96‑1 (MQ=255)
                                            ttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAg                                                >  2:13992949/1‑96 (MQ=255)
                                             tCCTGCGCTTTGGCAATAAAATCGCCCGCATTGACGGCCAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGa                                               <  1:5942526/96‑1 (MQ=255)
                                             tCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGa                                               <  2:9598810/96‑1 (MQ=255)
                                              ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGAc                                              <  1:7128660/96‑1 (MQ=255)
                                              ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGAc                                              <  2:6325812/96‑1 (MQ=255)
                                              ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGAc                                              <  2:6069738/96‑1 (MQ=255)
                                               cTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACg                                             >  1:5717190/1‑96 (MQ=255)
                                                tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGt                                            <  1:10012077/96‑1 (MQ=255)
                                                tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGt                                            <  1:877882/96‑1 (MQ=255)
                                                 gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGtt                                           <  1:634193/96‑1 (MQ=255)
                                                 gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGtt                                           <  1:8103391/96‑1 (MQ=255)
                                                 gcgcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAAAATCTTGCAGACGtt                                           >  2:13452551/1‑96 (MQ=255)
                                                   gcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCa                                         <  2:12031985/96‑1 (MQ=255)
                                                    cgttGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAg                                        >  1:12086434/3‑96 (MQ=255)
                                                    ccttGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAg                                        <  2:5334719/94‑1 (MQ=255)
                                                    cTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAg                                        >  2:14394717/1‑96 (MQ=255)
                                                     tttGCCAATAAAATCACCCGCATTGACGGCAAGGCGTAAAGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGc                                       >  1:12605402/1‑96 (MQ=255)
                                                      ttGGCAATAAAATCACCCGCATTGACGGCAATGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa                                      >  2:8401963/1‑96 (MQ=255)
                                                      ttGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa                                      >  2:4316178/1‑96 (MQ=255)
                                                       tGGCAATCAAATCACCCGCATTGAAGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCaa                                     <  1:4305246/96‑1 (MQ=255)
                                                       tGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCaa                                     >  2:13033741/1‑96 (MQ=255)
                                                        ggCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCaaa                                    >  1:13444922/1‑96 (MQ=255)
                                                        ggCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAACATCTTGCAGACGTTCAGCaaa                                    <  1:12867066/96‑1 (MQ=255)
                                                         gCAATCAAATCAGCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                   <  1:1827529/96‑1 (MQ=255)
                                                         gCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                   <  1:4166003/96‑1 (MQ=255)
                                                         gCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                   <  1:7672604/96‑1 (MQ=255)
                                                         gCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAc                                   <  1:8894480/96‑1 (MQ=255)
                                                          cAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACa                                  >  2:14188544/1‑96 (MQ=255)
                                                           aaTAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACACCGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAg                                 <  1:1401811/96‑1 (MQ=255)
                                                           aaTAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAg                                 >  2:12402336/1‑96 (MQ=255)
                                                              aaaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAAGTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCGAACAGgcg                              >  2:8832596/1‑96 (MQ=255)
                                                               aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgcgc                             <  2:6568337/96‑1 (MQ=255)
                                                               aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgcgc                             >  1:14179666/1‑96 (MQ=255)
                                                                aaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCa                            >  2:1052168/1‑96 (MQ=255)
                                                                  tCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa                          <  1:9594386/96‑1 (MQ=255)
                                                                     cccGCATTGACGGCAAGGCGTACCGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAt                       <  2:4954321/96‑1 (MQ=255)
                                                                     cccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAt                       >  2:10121382/1‑96 (MQ=255)
                                                                      ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt                      >  2:10006315/1‑96 (MQ=255)
                                                                      ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt                      <  1:14393384/96‑1 (MQ=255)
                                                                      ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt                      <  1:12267584/96‑1 (MQ=255)
                                                                       cGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTg                     <  1:7315673/96‑1 (MQ=255)
                                                                         cATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGcc                   >  2:3629506/1‑96 (MQ=255)
                                                                          aTTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCa                  >  1:6172421/1‑96 (MQ=255)
                                                                           ttGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGATGTTCAGCAAACAGGCGCAAACATTGCCaa                 <  1:11230861/96‑1 (MQ=255)
                                                                           ttGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCaa                 <  2:9120707/96‑1 (MQ=255)
                                                                           ttGACGGCAAGGCGTAACGTCGCCGCAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCaa                 >  1:5467742/1‑96 (MQ=255)
                                                                              aCGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACcg              <  1:2548446/96‑1 (MQ=255)
                                                                               cGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACcgc             >  1:3559907/1‑96 (MQ=255)
                                                                                  cAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGGGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCt          >  2:6969614/1‑96 (MQ=255)
                                                                                   aaGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTc         >  2:5531245/1‑96 (MQ=255)
                                                                                   aaGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTc         >  1:9429034/1‑96 (MQ=255)
                                                                                    aGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTcc        <  2:13238979/96‑1 (MQ=255)
                                                                                       cGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAtt     >  1:3715741/1‑96 (MQ=255)
                                                                                        gTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTg    >  2:1621401/1‑96 (MQ=255)
                                                                                        gTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTg    >  2:1264242/1‑96 (MQ=255)
                                                                                        gTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTg    >  2:10332788/1‑96 (MQ=255)
                                                                                          aaCGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCt  >  2:6511111/1‑96 (MQ=255)
                                                                                          aaCGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCt  >  2:2293437/1‑96 (MQ=255)
                                                                                             |                                                                                            
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT  >  NC_000913/3961495‑3961680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: